Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_H09
(401 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ352451-1|ABD22987.1| 3790|Drosophila melanogaster Nipped-A pro... 28 5.4
AY142217-1|AAN52145.1| 3803|Drosophila melanogaster transformati... 28 5.4
AE013599-60|AAF57342.2| 3805|Drosophila melanogaster CG33554-PA,... 28 5.4
AE013599-59|ABI31023.1| 3628|Drosophila melanogaster CG33554-PC,... 28 5.4
AE013599-58|ABI31022.1| 3400|Drosophila melanogaster CG33554-PB,... 28 5.4
U58776-1|AAC47266.1| 456|Drosophila melanogaster glutamate-gate... 27 9.4
DQ665648-1|ABG57261.1| 453|Drosophila melanogaster glutamate-ga... 27 9.4
AY061358-1|AAL28906.1| 319|Drosophila melanogaster LD28544p pro... 27 9.4
AF297500-1|AAG40735.1| 456|Drosophila melanogaster glutamate-ga... 27 9.4
AE014297-2703|AAF55695.1| 454|Drosophila melanogaster CG7535-PA... 27 9.4
AE013599-3837|AAF47180.1| 319|Drosophila melanogaster CG3362-PA... 27 9.4
>DQ352451-1|ABD22987.1| 3790|Drosophila melanogaster Nipped-A
protein.
Length = 3790
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -2
Query: 316 FHYFLILSHIFRNFPYG-H*LKYIKRIKKMISNILKSSQRTKQKLFYKVHQSTMIV 152
++YFL+L +FR+ G H L Y + ++ N+L+ R Q F+K H + V
Sbjct: 721 YNYFLLLRALFRSIGGGSHDLLY-QEFLPLLPNLLEGLNRL-QSGFHKQHMRDLFV 774
>AY142217-1|AAN52145.1| 3803|Drosophila melanogaster
transformation/transcription domain-associated protein
protein.
Length = 3803
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -2
Query: 316 FHYFLILSHIFRNFPYG-H*LKYIKRIKKMISNILKSSQRTKQKLFYKVHQSTMIV 152
++YFL+L +FR+ G H L Y + ++ N+L+ R Q F+K H + V
Sbjct: 783 YNYFLLLRALFRSIGGGSHDLLY-QEFLPLLPNLLEGLNRL-QSGFHKQHMRDLFV 836
>AE013599-60|AAF57342.2| 3805|Drosophila melanogaster CG33554-PA,
isoform A protein.
Length = 3805
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -2
Query: 316 FHYFLILSHIFRNFPYG-H*LKYIKRIKKMISNILKSSQRTKQKLFYKVHQSTMIV 152
++YFL+L +FR+ G H L Y + ++ N+L+ R Q F+K H + V
Sbjct: 785 YNYFLLLRALFRSIGGGSHDLLY-QEFLPLLPNLLEGLNRL-QSGFHKQHMRDLFV 838
>AE013599-59|ABI31023.1| 3628|Drosophila melanogaster CG33554-PC,
isoform C protein.
Length = 3628
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -2
Query: 316 FHYFLILSHIFRNFPYG-H*LKYIKRIKKMISNILKSSQRTKQKLFYKVHQSTMIV 152
++YFL+L +FR+ G H L Y + ++ N+L+ R Q F+K H + V
Sbjct: 629 YNYFLLLRALFRSIGGGSHDLLY-QEFLPLLPNLLEGLNRL-QSGFHKQHMRDLFV 682
>AE013599-58|ABI31022.1| 3400|Drosophila melanogaster CG33554-PB,
isoform B protein.
Length = 3400
Score = 27.9 bits (59), Expect = 5.4
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -2
Query: 316 FHYFLILSHIFRNFPYG-H*LKYIKRIKKMISNILKSSQRTKQKLFYKVHQSTMIV 152
++YFL+L +FR+ G H L Y + ++ N+L+ R Q F+K H + V
Sbjct: 459 YNYFLLLRALFRSIGGGSHDLLY-QEFLPLLPNLLEGLNRL-QSGFHKQHMRDLFV 512
>U58776-1|AAC47266.1| 456|Drosophila melanogaster glutamate-gated
chloride channel protein.
Length = 456
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 148 CQQS*YSDVLYKITF-VLFADSILIYWRSSFLF 243
C +S DV+ +ITF ++FA L+YW S++LF
Sbjct: 419 CSRSKRIDVISRITFPLVFALFNLVYW-STYLF 450
>DQ665648-1|ABG57261.1| 453|Drosophila melanogaster glutamate-gated
chloride channel protein.
Length = 453
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 148 CQQS*YSDVLYKITF-VLFADSILIYWRSSFLF 243
C +S DV+ +ITF ++FA L+YW S++LF
Sbjct: 414 CSRSKRIDVISRITFPLVFALFNLVYW-STYLF 445
>AY061358-1|AAL28906.1| 319|Drosophila melanogaster LD28544p
protein.
Length = 319
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 233 DDLQYIKIESANKTKVIL*STSEYYD 156
D Q I + NK + +L TSEYYD
Sbjct: 207 DGFQQPMIHTFNKNETVLNETSEYYD 232
>AF297500-1|AAG40735.1| 456|Drosophila melanogaster glutamate-gated
chloride channel protein.
Length = 456
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 148 CQQS*YSDVLYKITF-VLFADSILIYWRSSFLF 243
C +S DV+ +ITF ++FA L+YW S++LF
Sbjct: 419 CSRSKRIDVISRITFPLVFALFNLVYW-STYLF 450
>AE014297-2703|AAF55695.1| 454|Drosophila melanogaster CG7535-PA,
isoform A protein.
Length = 454
Score = 27.1 bits (57), Expect = 9.4
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = +1
Query: 148 CQQS*YSDVLYKITF-VLFADSILIYWRSSFLF 243
C +S DV+ +ITF ++FA L+YW S++LF
Sbjct: 417 CSRSKRIDVISRITFPLVFALFNLVYW-STYLF 448
>AE013599-3837|AAF47180.1| 319|Drosophila melanogaster CG3362-PA
protein.
Length = 319
Score = 27.1 bits (57), Expect = 9.4
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 233 DDLQYIKIESANKTKVIL*STSEYYD 156
D Q I + NK + +L TSEYYD
Sbjct: 207 DGFQQPMIHTFNKNETVLNETSEYYD 232
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,853,742
Number of Sequences: 53049
Number of extensions: 247033
Number of successful extensions: 265
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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