Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_H08
(526 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 181 3e-46
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z77652-7|CAB01119.1| 341|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 28 3.6
Z70782-5|CAA94843.1| 322|Caenorhabditis elegans Hypothetical pr... 28 3.6
U13646-5|ABA00178.1| 353|Caenorhabditis elegans Hypothetical pr... 28 3.6
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 28 3.6
Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical p... 28 4.7
Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical p... 28 4.7
Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical p... 28 4.7
Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical p... 28 4.7
Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical p... 28 4.7
Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical p... 28 4.7
Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical p... 28 4.7
Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical pr... 28 4.7
AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical ... 28 4.7
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ... 28 4.7
AL117206-1|CAB60446.1| 644|Caenorhabditis elegans Hypothetical ... 27 6.2
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 8.2
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 27 8.2
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 181 bits (440), Expect = 3e-46
Identities = 83/123 (67%), Positives = 103/123 (83%)
Frame = +3
Query: 156 IVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGF 335
+VG DNVGS+QMQ+IR ++RGH+ +LMGKNTM+RKA++ HL NP+LEKLLPHI NVGF
Sbjct: 29 LVGVDNVGSKQMQEIRQAMRGHAEILMGKNTMIRKALRGHLGKNPSLEKLLPHIVENVGF 88
Query: 336 VFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKIS 515
VFT+ DL ++R KLLEN+ APA+ GAIAP V +P NTG+GPEKTSFFQAL IPTKI+
Sbjct: 89 VFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTSFFQALQIPTKIA 148
Query: 516 KGT 524
+GT
Sbjct: 149 RGT 151
Score = 27.5 bits (58), Expect = 6.2
Identities = 8/16 (50%), Positives = 14/16 (87%)
Frame = +2
Query: 101 ESNYFVKIIQLLDEYP 148
++NYF K+++L +EYP
Sbjct: 10 KANYFTKLVELFEEYP 25
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 39.1 bits (87), Expect = 0.002
Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 3/127 (2%)
Frame = +3
Query: 150 MFIVGADNVGSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPA--LEKLLPHIKG 323
+FI N+ S + IR + +S GKN ++ A+ A L K +KG
Sbjct: 40 LFIFTIANMRSTRFIAIRQKYKENSRFFFGKNNVISIALGKQKSDEYANQLHKASAILKG 99
Query: 324 NVGFVFTRGDLVDVRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPEKTSFFQALSI 500
G +FT +V + E + AR G +A +VV+P + + L +
Sbjct: 100 QCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFSMEPQLRKLGL 159
Query: 501 PTKISKG 521
PTK+ KG
Sbjct: 160 PTKLDKG 166
>Z77652-7|CAB01119.1| 341|Caenorhabditis elegans Hypothetical
protein C06B3.10 protein.
Length = 341
Score = 29.1 bits (62), Expect = 2.0
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -3
Query: 386 VLQQFITHI-NKISTGEDKANISLDVRKQFFESWICFKMVLDGFPHHGVFAHEHNAVTTQ 210
++ F+ HI + IS NIS++ Q I LD P+ + NA+ TQ
Sbjct: 254 IIPVFLMHIPSTISMCAAFTNISIEFISQILSCTISLYPALDPLPNFFIIKSYRNAI-TQ 312
Query: 209 *NTDLLHLL 183
TD L LL
Sbjct: 313 YLTDFLRLL 321
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/86 (20%), Positives = 42/86 (48%)
Frame = +3
Query: 177 GSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDL 356
GS + + R + GH+ +L + + ++DH+++ ++K+ + N F+ + L
Sbjct: 192 GSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHNIKKVYNCLCCNWTFL-NQVHL 250
Query: 357 VDVRDKLLENKVQAPARPGAIAPLSV 434
+ L+ + RPG + PL++
Sbjct: 251 IS-HKTCLKQTGKPCCRPGHMEPLAI 275
>Z70782-5|CAA94843.1| 322|Caenorhabditis elegans Hypothetical
protein R04B5.7 protein.
Length = 322
Score = 28.3 bits (60), Expect = 3.6
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = +3
Query: 108 ITSLKSSNCWTNTQMFIVGADNVGSQQMQQIRI 206
+ +L+S + W+N Q+F+ A ++ QQI++
Sbjct: 229 LATLQSQSNWSNNQLFVPPAHHMNPANTQQIQV 261
>U13646-5|ABA00178.1| 353|Caenorhabditis elegans Hypothetical
protein ZK783.6 protein.
Length = 353
Score = 28.3 bits (60), Expect = 3.6
Identities = 11/29 (37%), Positives = 20/29 (68%)
Frame = -3
Query: 101 PVALSSYPFGLSEVGTSEKFKDKTNTHRP 15
PV++++YP G+S VG+S ++ D +P
Sbjct: 186 PVSINNYPKGVSGVGSSFRYSDINVVFQP 214
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/86 (20%), Positives = 42/86 (48%)
Frame = +3
Query: 177 GSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLPHIKGNVGFVFTRGDL 356
GS + + R + GH+ +L + + ++DH+++ ++K+ + N F+ + L
Sbjct: 192 GSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHNIKKVYNCLCCNWTFL-NQVHL 250
Query: 357 VDVRDKLLENKVQAPARPGAIAPLSV 434
+ L+ + RPG + PL++
Sbjct: 251 IS-HKTCLKQTGKPCCRPGHMEPLAI 275
>Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 221 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 322
+H H Q HH HQ PS N SS ASS G
Sbjct: 369 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 404
>Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 221 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 322
+H H Q HH HQ PS N SS ASS G
Sbjct: 346 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 381
>Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 221 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 322
+H H Q HH HQ PS N SS ASS G
Sbjct: 531 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 566
>Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 221 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 322
+H H Q HH HQ PS N SS ASS G
Sbjct: 390 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 425
>Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical
protein C01F6.6e protein.
Length = 331
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 221 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 322
+H H Q HH HQ PS N SS ASS G
Sbjct: 254 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 289
>Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 221 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 322
+H H Q HH HQ PS N SS ASS G
Sbjct: 369 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 404
>Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 221 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 322
+H H Q HH HQ PS N SS ASS G
Sbjct: 346 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 381
>Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 221 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 322
+H H Q HH HQ PS N SS ASS G
Sbjct: 531 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 566
>Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 221 QHCAHGQKHHDEESHQGPS--*NKSSSRKTASSHQG 322
+H H Q HH HQ PS N SS ASS G
Sbjct: 390 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 425
>AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical
protein Y67D8B.2 protein.
Length = 327
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 375 LLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGT 524
+L +Q A A+ L+ +P TGL P + FQAL P I+ T
Sbjct: 42 VLNRYMQLEAYCDAVDDLTGALP--KTGLAPNEPDLFQALFFPRSIAPRT 89
>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
protein Y46B2A.3 protein.
Length = 1145
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 436 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVKTKPT 326
TT P AG WT+ +N ++R TR P +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227
>AL117206-1|CAB60446.1| 644|Caenorhabditis elegans Hypothetical
protein Y67A10A.1 protein.
Length = 644
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = -3
Query: 389 FVLQQFITHINKISTGEDKANISLDVRKQFFESWICFKMVLDGFPH-HGVFAH--EHNAV 219
F++ +++ +I +DK ++ +E ++ +LD FP H F + H AV
Sbjct: 494 FIVARYMNNIKNPVQKDDKIVQQINETIAHYEKYVKKLYILDAFPEFHENFLNLFLHYAV 553
Query: 218 TTQ*NTDLLHL 186
T + D LHL
Sbjct: 554 TRPDDMDALHL 564
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.1 bits (57), Expect = 8.2
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 230 AHGQKHHDEESHQGPS*NKSSSRKTASS 313
+HG+KHH + + S + SSS ++SS
Sbjct: 329 SHGKKHHKKAASSSSSSSSSSSSSSSSS 356
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.1 bits (57), Expect = 8.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 486 GRKKSSQDQGQCYERE*RQTMEQWLQDE 403
GRKK ++ QC +RE R EQ DE
Sbjct: 424 GRKKREAERDQCLKREKRYADEQCDNDE 451
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,265,702
Number of Sequences: 27780
Number of extensions: 287328
Number of successful extensions: 832
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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