BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_H07
(211 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 23 0.40
X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor pro... 22 0.69
X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor pro... 22 0.69
AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor p... 22 0.69
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 1.2
AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding prote... 21 1.2
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 20 2.8
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 19 4.9
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 19 4.9
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 19 6.4
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 19 6.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 19 8.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 19 8.5
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 23.0 bits (47), Expect = 0.40
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 80 RDRPQERAVPGDARRAHAPVPGPAH 154
R R + A PG+ R + P P P H
Sbjct: 115 RLRREPEAEPGNNRPVYIPQPRPPH 139
Score = 23.0 bits (47), Expect = 0.40
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 80 RDRPQERAVPGDARRAHAPVPGPAH 154
R R + A PG+ R + P P P H
Sbjct: 141 RLRREPEAEPGNNRPVYIPQPRPPH 165
Score = 22.6 bits (46), Expect = 0.52
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 80 RDRPQERAVPGDARRAHAPVPGPAH 154
R + +A PG+ R + P P P H
Sbjct: 61 RREAEPKAEPGNNRPIYIPQPRPPH 85
Score = 22.6 bits (46), Expect = 0.52
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 80 RDRPQERAVPGDARRAHAPVPGPAH 154
R + A PG+ R + P P P H
Sbjct: 89 RREAESEAEPGNNRPVYIPQPRPPH 113
Score = 21.8 bits (44), Expect = 0.91
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 77 RRDRPQERAVPGDARRAHAPVPGPAH 154
RR+ E A PG+ R + P P P H
Sbjct: 33 RREAKPE-AEPGNNRPIYIPQPRPPH 57
>X72577-1|CAA51169.1| 283|Apis mellifera Apidaecin precursor
protein.
Length = 283
Score = 22.2 bits (45), Expect = 0.69
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 77 RRDRPQERAVPGDARRAHAPVPGPAH 154
RR+ E A PG+ R + P P P H
Sbjct: 32 RREAKPE-AEPGNNRPVYIPQPRPPH 56
Score = 22.2 bits (45), Expect = 0.69
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 80 RDRPQERAVPGDARRAHAPVPGPAH 154
R + A PG+ R + P P P H
Sbjct: 60 RREAEPEAEPGNNRPVYIPQPRPPH 84
Score = 22.2 bits (45), Expect = 0.69
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 80 RDRPQERAVPGDARRAHAPVPGPAH 154
R + A PG+ R + P P P H
Sbjct: 116 RREAEPEAEPGNNRPVYIPQPRPPH 140
Score = 22.2 bits (45), Expect = 0.69
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 80 RDRPQERAVPGDARRAHAPVPGPAH 154
R + A PG+ R + P P P H
Sbjct: 172 RREAEPEAEPGNNRPVYIPQPRPPH 196
Score = 22.2 bits (45), Expect = 0.69
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 80 RDRPQERAVPGDARRAHAPVPGPAH 154
R + A PG+ R + P P P H
Sbjct: 200 RREAEPEAEPGNNRPVYIPQPRPPH 224
Score = 22.2 bits (45), Expect = 0.69
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 80 RDRPQERAVPGDARRAHAPVPGPAH 154
R + A PG+ R + P P P H
Sbjct: 228 RREAEPEAEPGNNRPVYIPQPRPPH 252
Score = 22.2 bits (45), Expect = 0.69
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 77 RRDRPQERAVPGDARRAHAPVPGPAH 154
RR+ E A PG+ R + P P P H
Sbjct: 256 RREAKPE-AKPGNNRPVYIPQPRPPH 280
>X72576-1|CAA51168.1| 144|Apis mellifera Apidaecin precursor
protein.
Length = 144
Score = 22.2 bits (45), Expect = 0.69
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 80 RDRPQERAVPGDARRAHAPVPGPAH 154
R + A PG+ R + P P P H
Sbjct: 33 RREAEPEAEPGNNRPVYIPQPRPPH 57
Score = 22.2 bits (45), Expect = 0.69
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 80 RDRPQERAVPGDARRAHAPVPGPAH 154
R + A PG+ R + P P P H
Sbjct: 61 RREAEPEAEPGNNRPVYIPQPRPPH 85
Score = 22.2 bits (45), Expect = 0.69
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 80 RDRPQERAVPGDARRAHAPVPGPAH 154
R + A PG+ R + P P P H
Sbjct: 89 RREAEPEAEPGNNRPVYIPQPRPPH 113
Score = 22.2 bits (45), Expect = 0.69
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 80 RDRPQERAVPGDARRAHAPVPGPAH 154
R + A PG+ R + P P P H
Sbjct: 117 RREAEPEAEPGNNRPVYIPQPRPPH 141
>AF442148-1|AAL35349.1| 199|Apis mellifera apidaecin precursor
protein.
Length = 199
Score = 22.2 bits (45), Expect = 0.69
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 77 RRDRPQERAVPGDARRAHAPVPGPAH 154
RR+ E A PG+ R + P P P H
Sbjct: 4 RREAKPE-AEPGNNRPVYIPQPRPPH 28
Score = 22.2 bits (45), Expect = 0.69
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 80 RDRPQERAVPGDARRAHAPVPGPAH 154
R + A PG+ R + P P P H
Sbjct: 32 RREAEPEAEPGNNRPVYIPQPRPPH 56
Score = 22.2 bits (45), Expect = 0.69
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 80 RDRPQERAVPGDARRAHAPVPGPAH 154
R + A PG+ R + P P P H
Sbjct: 60 RREAEPEAEPGNNRPVYIPQPRPPH 84
Score = 22.2 bits (45), Expect = 0.69
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 80 RDRPQERAVPGDARRAHAPVPGPAH 154
R + A PG+ R + P P P H
Sbjct: 88 RREAEPEAEPGNNRPVYIPQPRPPH 112
Score = 22.2 bits (45), Expect = 0.69
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 80 RDRPQERAVPGDARRAHAPVPGPAH 154
R + A PG+ R + P P P H
Sbjct: 116 RREAEPEAEPGNNRPVYIPQPRPPH 140
Score = 22.2 bits (45), Expect = 0.69
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 77 RRDRPQERAVPGDARRAHAPVPGPAH 154
RR+ E A PG+ R + P P P H
Sbjct: 144 RREAKPE-AEPGNNRPVYIPQPRPPH 168
Score = 22.2 bits (45), Expect = 0.69
Identities = 9/25 (36%), Positives = 12/25 (48%)
Frame = +2
Query: 80 RDRPQERAVPGDARRAHAPVPGPAH 154
R + A PG+ R + P P P H
Sbjct: 172 RREAEPEAEPGNNRPVYIPQPRPPH 196
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.4 bits (43), Expect = 1.2
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2
Query: 146 PAHQGERLGAARHLHQQDHG 205
P ++ + A + HQQDHG
Sbjct: 82 PYNRMDMRNATYYQHQQDHG 101
>AF393496-1|AAL60421.1| 146|Apis mellifera odorant binding protein
ASP6 protein.
Length = 146
Score = 21.4 bits (43), Expect = 1.2
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 30 RITPEEAKYKLCNVRRVATGPKSVP 104
++T EEAK + N+R+V + P
Sbjct: 26 KMTIEEAKKTIKNLRKVCSKKNDTP 50
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 20.2 bits (40), Expect = 2.8
Identities = 8/17 (47%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = -3
Query: 206 VHD-LVGGDVELHRVVH 159
+HD L+G D+ HR+ H
Sbjct: 418 IHDELLGADLVEHRIRH 434
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 19.4 bits (38), Expect = 4.9
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 3/31 (9%)
Frame = +2
Query: 59 AVQCAARRD---RPQERAVPGDARRAHAPVP 142
AV AR + R RA PGD+ P+P
Sbjct: 902 AVDTVARSNVTPRSPGRAWPGDSDIRQRPIP 932
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 19.4 bits (38), Expect = 4.9
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 26 PPYHT*RSQVQAVQC 70
PP + SQ QA QC
Sbjct: 678 PPARSPSSQAQASQC 692
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 19.0 bits (37), Expect = 6.4
Identities = 6/13 (46%), Positives = 11/13 (84%)
Frame = -1
Query: 73 RTLHSLYLASSGV 35
+T+ S Y+A+SG+
Sbjct: 840 KTIGSTYMAASGI 852
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 19.0 bits (37), Expect = 6.4
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +3
Query: 21 TIHRITPEEAKYKLCNVRR 77
TIHR +E K+C R
Sbjct: 1688 TIHRTQVKETDDKICFTMR 1706
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 18.6 bits (36), Expect = 8.5
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +3
Query: 21 TIHRITPEEAKYKLCNVR 74
T+HR+T + + NVR
Sbjct: 211 TMHRLTRQVVVSSVANVR 228
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 18.6 bits (36), Expect = 8.5
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +3
Query: 21 TIHRITPEEAKYKLCNVR 74
T+HR+T + + NVR
Sbjct: 211 TMHRLTRQVVVSSVANVR 228
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.314 0.122 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,918
Number of Sequences: 438
Number of extensions: 1216
Number of successful extensions: 32
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used: 3039192
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.3 bits)
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