Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_H06
(360 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily ass... 43 7e-05
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 31 0.24
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 31 0.24
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 31 0.24
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 31 0.24
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 31 0.24
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 31 0.24
Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical pr... 29 0.98
Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical pr... 29 0.98
AC006830-1|AAK68610.3| 802|Caenorhabditis elegans Hypothetical ... 27 3.0
AF077529-5|AAN60534.1| 756|Caenorhabditis elegans Hypothetical ... 27 3.9
AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical ... 27 3.9
Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical pr... 27 5.2
U97407-9|AAL02457.2| 1768|Caenorhabditis elegans Hypothetical pr... 26 9.1
U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical p... 26 9.1
U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical pr... 26 9.1
>U41534-1|AAB47593.3| 1437|Caenorhabditis elegans Temporarily
assigned gene nameprotein 213 protein.
Length = 1437
Score = 42.7 bits (96), Expect = 7e-05
Identities = 21/75 (28%), Positives = 41/75 (54%)
Frame = +3
Query: 9 QKMAGIEAAEEMTTEQLEAMAGGELLKGDAGYFSQVRNTRRSSSQTERSYSLVIIWISLC 188
Q M+ IE+ T EQ+EA+ GG+LLK +A +S R+++ + + + + L
Sbjct: 665 QNMSWIESISGATKEQIEALGGGDLLKQEADGYSTATKNRKAAQRLRDALLKGDLAVGLA 724
Query: 189 VYYQRNKDIVVFGKS 233
+ + K+ +V+ +S
Sbjct: 725 ISVAQQKEHIVYNES 739
Score = 32.3 bits (70), Expect = 0.10
Identities = 22/59 (37%), Positives = 30/59 (50%)
Frame = +2
Query: 170 NLDIALCILSAQQRHCCVWKECDEELLPSGEPPGSQLKVVGKLADQCQDALVQLGPFMA 346
+L + L I AQQ+ V+ E LP LK+VGK+ DQC D QL F++
Sbjct: 718 DLAVGLAISVAQQKEHIVYNE--SSTLP--------LKLVGKMVDQCSDTFQQLVSFLS 766
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 31.1 bits (67), Expect = 0.24
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +2
Query: 176 DIALCILSAQQRHCCVWKECDEELLPSGEPPGSQLKVVGKLADQCQDAL 322
D C+ SA+ C + CDE L G P L + GK C DAL
Sbjct: 688 DCTSCVCSAEGSADCYKEACDESLECRGNP----LVIKGKCCPVCSDAL 732
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 31.1 bits (67), Expect = 0.24
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +2
Query: 176 DIALCILSAQQRHCCVWKECDEELLPSGEPPGSQLKVVGKLADQCQDAL 322
D C+ SA+ C + CDE L G P L + GK C DAL
Sbjct: 622 DCTSCVCSAEGSADCYKEACDESLECRGNP----LVIKGKCCPVCSDAL 666
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 31.1 bits (67), Expect = 0.24
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +2
Query: 176 DIALCILSAQQRHCCVWKECDEELLPSGEPPGSQLKVVGKLADQCQDAL 322
D C+ SA+ C + CDE L G P L + GK C DAL
Sbjct: 688 DCTSCVCSAEGSADCYKEACDESLECRGNP----LVIKGKCCPVCSDAL 732
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 31.1 bits (67), Expect = 0.24
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +2
Query: 176 DIALCILSAQQRHCCVWKECDEELLPSGEPPGSQLKVVGKLADQCQDAL 322
D C+ SA+ C + CDE L G P L + GK C DAL
Sbjct: 622 DCTSCVCSAEGSADCYKEACDESLECRGNP----LVIKGKCCPVCSDAL 666
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 31.1 bits (67), Expect = 0.24
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +2
Query: 176 DIALCILSAQQRHCCVWKECDEELLPSGEPPGSQLKVVGKLADQCQDAL 322
D C+ SA+ C + CDE L G P L + GK C DAL
Sbjct: 622 DCTSCVCSAEGSADCYKEACDESLECRGNP----LVIKGKCCPVCSDAL 666
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 31.1 bits (67), Expect = 0.24
Identities = 18/49 (36%), Positives = 22/49 (44%)
Frame = +2
Query: 176 DIALCILSAQQRHCCVWKECDEELLPSGEPPGSQLKVVGKLADQCQDAL 322
D C+ SA+ C + CDE L G P L + GK C DAL
Sbjct: 622 DCTSCVCSAEGSADCYKEACDESLECRGNP----LVIKGKCCPVCSDAL 666
>Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 29.1 bits (62), Expect = 0.98
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 188 CILSAQQRHCCVWKECDEELLPSGEPPGSQLKVVGKLADQCQDA 319
CI++ Q H VW EC + L SG G L + + + DA
Sbjct: 337 CIMNPQSGHMEVWSECSVKNLASGFNRGIDLCLFNEPGKKPSDA 380
>Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 29.1 bits (62), Expect = 0.98
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 188 CILSAQQRHCCVWKECDEELLPSGEPPGSQLKVVGKLADQCQDA 319
CI++ Q H VW EC + L SG G L + + + DA
Sbjct: 337 CIMNPQSGHMEVWSECSVKNLASGFNRGIDLCLFNEPGKKPSDA 380
>AC006830-1|AAK68610.3| 802|Caenorhabditis elegans Hypothetical
protein ZK105.3 protein.
Length = 802
Score = 27.5 bits (58), Expect = 3.0
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1
Query: 120 YELVKNIQHLL*VIHLQPWLLIVRLSFPRLLRYRPFFAS 4
Y L KN+ +L V++ PW + L F RL Y P+FAS
Sbjct: 488 YVLKKNLNTVLIVVNNYPWKYGMGL-FQRL--YEPYFAS 523
>AF077529-5|AAN60534.1| 756|Caenorhabditis elegans Hypothetical
protein C09E8.1b protein.
Length = 756
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 141 QTERSYSLVIIWISLCVYYQRNKDIVVFG 227
QT + +IIW S+ YY R DI++ G
Sbjct: 189 QTAHILTWLIIWFSISKYYDRLGDILLKG 217
>AF077529-4|AAC26255.2| 783|Caenorhabditis elegans Hypothetical
protein C09E8.1a protein.
Length = 783
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 141 QTERSYSLVIIWISLCVYYQRNKDIVVFG 227
QT + +IIW S+ YY R DI++ G
Sbjct: 189 QTAHILTWLIIWFSISKYYDRLGDILLKG 217
>Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical
protein R74.4 protein.
Length = 378
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/23 (52%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
Frame = +2
Query: 200 AQQRHCCVWKECDEEL--LPSGE 262
AQ RH C+ +ECD + LP GE
Sbjct: 126 AQARHICMGQECDVQARQLPPGE 148
>U97407-9|AAL02457.2| 1768|Caenorhabditis elegans Hypothetical
protein C34G6.1 protein.
Length = 1768
Score = 25.8 bits (54), Expect = 9.1
Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Frame = +3
Query: 27 EAAEEMTTEQLEAMAGGELLKGDA-GYFSQVRNTRRSSSQTERSYSLVIIWI 179
E E E E G A G+ +V N S QTE Y ++ WI
Sbjct: 210 ECETERPKEASEEYIGDHSRPNSASGHCQEVSNRATYSDQTEAVYDVIFSWI 261
>U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical
protein ZK328.7b protein.
Length = 1098
Score = 25.8 bits (54), Expect = 9.1
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -2
Query: 326 ALEHLGTDLRVSPQLSTVTREAHRWVIIL 240
AL + TDL+ + LS + +E ++W ++L
Sbjct: 920 ALAYHETDLKANLLLSKIFKEENKWTLVL 948
>U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical protein
ZK328.7a protein.
Length = 1332
Score = 25.8 bits (54), Expect = 9.1
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = -2
Query: 326 ALEHLGTDLRVSPQLSTVTREAHRWVIIL 240
AL + TDL+ + LS + +E ++W ++L
Sbjct: 920 ALAYHETDLKANLLLSKIFKEENKWTLVL 948
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,271,939
Number of Sequences: 27780
Number of extensions: 151961
Number of successful extensions: 457
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 457
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 492763868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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