Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_H05
(491 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 124 3e-29
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 124 3e-29
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 124 3e-29
U64835-6|AAG24199.1| 341|Caenorhabditis elegans Serpentine rece... 32 0.20
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 30 1.0
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 30 1.0
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 30 1.0
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 30 1.0
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 30 1.0
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 30 1.0
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 30 1.0
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 29 1.8
AF016445-4|AAC69058.1| 312|Caenorhabditis elegans Hypothetical ... 29 1.8
Z97190-2|CAM06586.1| 650|Caenorhabditis elegans Hypothetical pr... 28 3.2
Z66564-7|CAA91472.2| 650|Caenorhabditis elegans Hypothetical pr... 28 3.2
U58754-6|AAK72081.1| 325|Caenorhabditis elegans Serpentine rece... 28 4.2
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 4.2
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 4.2
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 4.2
U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical p... 27 7.4
U97003-7|AAB52274.1| 357|Caenorhabditis elegans Hypothetical pr... 27 7.4
U42843-7|AAA83598.2| 326|Caenorhabditis elegans Serpentine rece... 27 7.4
U58754-8|AAK72082.1| 325|Caenorhabditis elegans Serpentine rece... 27 9.8
U21319-1|AAC46673.2| 258|Caenorhabditis elegans Hypothetical pr... 27 9.8
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 124 bits (300), Expect = 3e-29
Identities = 74/147 (50%), Positives = 89/147 (60%), Gaps = 3/147 (2%)
Frame = +3
Query: 57 YTNGGIGTVPVGKLK--LVS*SLVCCRFCPC*HHY*SQVRGNAATESSYNESLLPRVQ-Q 227
Y GGIGTVPVG+++ ++ +V F P V + ++ESL V
Sbjct: 220 YKIGGIGTVPVGRVETGIIKPGMVVT-FAP------QNVTTEVKSVEMHHESLPEAVPGD 272
Query: 228 LVGFTTGQENRILVKAICARGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLD 407
VGF + VK I RG V DSK +P + A F AQVI++NHPGQISNGYTPVLD
Sbjct: 273 NVGFNV---KNVSVKDI-RRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLD 328
Query: 408 CHTGHIACKFAEIKEKVDRRTGKSTED 488
CHT HIACKF E+KEKVDRRTGK ED
Sbjct: 329 CHTAHIACKFNELKEKVDRRTGKKVED 355
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 124 bits (300), Expect = 3e-29
Identities = 74/147 (50%), Positives = 89/147 (60%), Gaps = 3/147 (2%)
Frame = +3
Query: 57 YTNGGIGTVPVGKLK--LVS*SLVCCRFCPC*HHY*SQVRGNAATESSYNESLLPRVQ-Q 227
Y GGIGTVPVG+++ ++ +V F P V + ++ESL V
Sbjct: 254 YKIGGIGTVPVGRVETGIIKPGMVVT-FAP------QNVTTEVKSVEMHHESLPEAVPGD 306
Query: 228 LVGFTTGQENRILVKAICARGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLD 407
VGF + VK I RG V DSK +P + A F AQVI++NHPGQISNGYTPVLD
Sbjct: 307 NVGFNV---KNVSVKDI-RRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLD 362
Query: 408 CHTGHIACKFAEIKEKVDRRTGKSTED 488
CHT HIACKF E+KEKVDRRTGK ED
Sbjct: 363 CHTAHIACKFNELKEKVDRRTGKKVED 389
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 124 bits (300), Expect = 3e-29
Identities = 74/147 (50%), Positives = 89/147 (60%), Gaps = 3/147 (2%)
Frame = +3
Query: 57 YTNGGIGTVPVGKLK--LVS*SLVCCRFCPC*HHY*SQVRGNAATESSYNESLLPRVQ-Q 227
Y GGIGTVPVG+++ ++ +V F P V + ++ESL V
Sbjct: 254 YKIGGIGTVPVGRVETGIIKPGMVVT-FAP------QNVTTEVKSVEMHHESLPEAVPGD 306
Query: 228 LVGFTTGQENRILVKAICARGYVAGDSKNNPPRGAADFTAQVIVLNHPGQISNGYTPVLD 407
VGF + VK I RG V DSK +P + A F AQVI++NHPGQISNGYTPVLD
Sbjct: 307 NVGFNV---KNVSVKDI-RRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLD 362
Query: 408 CHTGHIACKFAEIKEKVDRRTGKSTED 488
CHT HIACKF E+KEKVDRRTGK ED
Sbjct: 363 CHTAHIACKFNELKEKVDRRTGKKVED 389
>U64835-6|AAG24199.1| 341|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 9 protein.
Length = 341
Score = 32.3 bits (70), Expect = 0.20
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +1
Query: 145 NITTEVKSVEMQPLRALTMKACYP 216
N+ +E KS+ Q LRALT++AC P
Sbjct: 219 NLRSETKSIHKQLLRALTLQACLP 242
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +2
Query: 209 VTPGATIGWVYNRSREPYLGQGNLRAWLRCRRFEKQPTQGSCRLHSASHCAKSPRSNIKR 388
VT A VYN S G G ++W R F + T+ SCR+ ++ C S ++N
Sbjct: 845 VTVSADCLEVYNASLSKPCGDG--KSWSN-RYFYDKDTR-SCRMFWSNGCFSSSKNNFDD 900
Query: 389 IHTC 400
+ TC
Sbjct: 901 LETC 904
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +2
Query: 209 VTPGATIGWVYNRSREPYLGQGNLRAWLRCRRFEKQPTQGSCRLHSASHCAKSPRSNIKR 388
VT A VYN S G G ++W R F + T+ SCR+ ++ C S ++N
Sbjct: 1059 VTVSADCLEVYNASLSKPCGDG--KSWSN-RYFYDKDTR-SCRMFWSNGCFSSSKNNFDD 1114
Query: 389 IHTC 400
+ TC
Sbjct: 1115 LETC 1118
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +2
Query: 209 VTPGATIGWVYNRSREPYLGQGNLRAWLRCRRFEKQPTQGSCRLHSASHCAKSPRSNIKR 388
VT A VYN S G G ++W R F + T+ SCR+ ++ C S ++N
Sbjct: 1195 VTVSADCLEVYNASLSKPCGDG--KSWSN-RYFYDKDTR-SCRMFWSNGCFSSSKNNFDD 1250
Query: 389 IHTC 400
+ TC
Sbjct: 1251 LETC 1254
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +2
Query: 209 VTPGATIGWVYNRSREPYLGQGNLRAWLRCRRFEKQPTQGSCRLHSASHCAKSPRSNIKR 388
VT A VYN S G G ++W R F + T+ SCR+ ++ C S ++N
Sbjct: 1244 VTVSADCLEVYNASLSKPCGDG--KSWSN-RYFYDKDTR-SCRMFWSNGCFSSSKNNFDD 1299
Query: 389 IHTC 400
+ TC
Sbjct: 1300 LETC 1303
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +2
Query: 209 VTPGATIGWVYNRSREPYLGQGNLRAWLRCRRFEKQPTQGSCRLHSASHCAKSPRSNIKR 388
VT A VYN S G G ++W R F + T+ SCR+ ++ C S ++N
Sbjct: 1236 VTVSADCLEVYNASLSKPCGDG--KSWSN-RYFYDKDTR-SCRMFWSNGCFSSSKNNFDD 1291
Query: 389 IHTC 400
+ TC
Sbjct: 1292 LETC 1295
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +2
Query: 209 VTPGATIGWVYNRSREPYLGQGNLRAWLRCRRFEKQPTQGSCRLHSASHCAKSPRSNIKR 388
VT A VYN S G G ++W R F + T+ SCR+ ++ C S ++N
Sbjct: 1247 VTVSADCLEVYNASLSKPCGDG--KSWSN-RYFYDKDTR-SCRMFWSNGCFSSSKNNFDD 1302
Query: 389 IHTC 400
+ TC
Sbjct: 1303 LETC 1306
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 29.9 bits (64), Expect = 1.0
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +2
Query: 209 VTPGATIGWVYNRSREPYLGQGNLRAWLRCRRFEKQPTQGSCRLHSASHCAKSPRSNIKR 388
VT A VYN S G G ++W R F + T+ SCR+ ++ C S ++N
Sbjct: 1248 VTVSADCLEVYNASLSKPCGDG--KSWSN-RYFYDKDTR-SCRMFWSNGCFSSSKNNFDD 1303
Query: 389 IHTC 400
+ TC
Sbjct: 1304 LETC 1307
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +3
Query: 339 FTAQVIVLNHPGQISNGYTPVLDCHTGHIACKFAEIKEKVDRRTGK 476
F A+V+VL H I++GY+ VL + + +D++TG+
Sbjct: 431 FDAEVLVLEHRSIIASGYSCVLHIQSAVEEVTVKGVIATIDKKTGE 476
>AF016445-4|AAC69058.1| 312|Caenorhabditis elegans Hypothetical
protein T05B4.8 protein.
Length = 312
Score = 29.1 bits (62), Expect = 1.8
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 12/113 (10%)
Frame = -1
Query: 335 CSSPGWVVFRIS-----CNVTTRANCLDQDTVLLTGCKPNQLLHPG*QAFI----VRALS 183
C+SP W + C +A C+D T T Q + G Q F+ R
Sbjct: 196 CNSPAWRTIIAADCPSACGFCNQAGCVDAVTNCGTDLSICQNI--GMQTFVNTYCQRTCG 253
Query: 182 GCISTDLT-SVVMLAGAKTT--TDQALGYQFQLTHGYCSNTAICIRPRAEFCS 33
C ST SV + +G T+ D + T+G+C+NT + R C+
Sbjct: 254 RCPSTTAAGSVTVTSGTCTSYIADSSSNCAAWSTNGFCTNTFYTVAQRRSRCA 306
>Z97190-2|CAM06586.1| 650|Caenorhabditis elegans Hypothetical
protein F52D10.6 protein.
Length = 650
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 202 KACYPGCNNWLGLQPVKRTVSWSRQFARVVTLQ 300
K CY N W+ L+ + R ++W ARV+ +Q
Sbjct: 288 KECYTQVN-WILLKILNRLINWQPVLARVIEIQ 319
>Z66564-7|CAA91472.2| 650|Caenorhabditis elegans Hypothetical
protein F52D10.6 protein.
Length = 650
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 202 KACYPGCNNWLGLQPVKRTVSWSRQFARVVTLQ 300
K CY N W+ L+ + R ++W ARV+ +Q
Sbjct: 288 KECYTQVN-WILLKILNRLINWQPVLARVIEIQ 319
>U58754-6|AAK72081.1| 325|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 12 protein.
Length = 325
Score = 27.9 bits (59), Expect = 4.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 112 KAWSVVVFAPANITTEVKSVEMQPLRALTMKACYPG 219
K S + + NIT++ K++ Q L ALT +A PG
Sbjct: 209 KIISRLSYQGVNITSDTKNLHSQLLMALTYQAAIPG 244
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 27.9 bits (59), Expect = 4.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 402 LDCHTGHIACKFAEIKEKVDRRTGKSTE 485
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 27.9 bits (59), Expect = 4.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 402 LDCHTGHIACKFAEIKEKVDRRTGKSTE 485
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 27.9 bits (59), Expect = 4.2
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +3
Query: 402 LDCHTGHIACKFAEIKEKVDRRTGKSTE 485
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U23171-3|AAC46706.1| 1020|Caenorhabditis elegans Hypothetical
protein K02A2.3 protein.
Length = 1020
Score = 27.5 bits (58), Expect = 5.6
Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = -1
Query: 272 LDQDTVLLTGCKPNQLLHPG*QAFIVRALSGCISTDLTSVVMLAGAKT-TTDQALGYQFQ 96
L Q ++ G K QLL P ++ A++ CI + + + G K D L
Sbjct: 214 LIQALIVAMGVKFVQLLAPVSLMCVILAIAACIGGGIEKQITMEGMKVCAIDNHLLQSSI 273
Query: 95 LTHGYCSNTAICIRPRAEFCS 33
+TH N +FC+
Sbjct: 274 VTHPIHKNQTSWFNETVDFCN 294
>Z81061-7|CAB02939.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +3
Query: 309 KNNPPRGAAD-FTAQVIVLNHP 371
K NPP+GAAD F +V+ L+ P
Sbjct: 279 KANPPQGAADKFHVKVVTLHEP 300
>Z78413-11|CAB01667.2| 819|Caenorhabditis elegans Hypothetical
protein T01C3.10 protein.
Length = 819
Score = 27.1 bits (57), Expect = 7.4
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +3
Query: 309 KNNPPRGAAD-FTAQVIVLNHP 371
K NPP+GAAD F +V+ L+ P
Sbjct: 279 KANPPQGAADKFHVKVVTLHEP 300
>U97003-7|AAB52274.1| 357|Caenorhabditis elegans Hypothetical
protein F47C10.4 protein.
Length = 357
Score = 27.1 bits (57), Expect = 7.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 319 HPGELQTSQRKSLC*ITQVKYQTDTHLYWI 408
H G + ++ SLC +T Y+ +LYWI
Sbjct: 311 HNGSSRFTELLSLCTVTNKYYEDVQYLYWI 340
>U42843-7|AAA83598.2| 326|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 5 protein.
Length = 326
Score = 27.1 bits (57), Expect = 7.4
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 133 FAPANITTEVKSVEMQPLRALTMKACYPG 219
F + +S+++Q LRALT +A PG
Sbjct: 213 FKGVQVNANTRSLQLQLLRALTFQAVIPG 241
>U58754-8|AAK72082.1| 325|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 13 protein.
Length = 325
Score = 26.6 bits (56), Expect = 9.8
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 145 NITTEVKSVEMQPLRALTMKACYPG 219
NIT E +++ Q L ALT +A PG
Sbjct: 220 NITKETRNMHSQLLMALTYQAAIPG 244
>U21319-1|AAC46673.2| 258|Caenorhabditis elegans Hypothetical
protein C30G12.4 protein.
Length = 258
Score = 26.6 bits (56), Expect = 9.8
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 254 LLTGCKPNQLLHPG*QAFIVRALSGCISTDLTSVVMLAGAKTTTDQALG 108
++ CK LL+ G + I+ + C++T T V A TTT A G
Sbjct: 110 MMVSCK--LLLYYGTFSSIISIVLSCVATSPTGTVTTTVAPTTTTAATG 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,746,138
Number of Sequences: 27780
Number of extensions: 279482
Number of successful extensions: 806
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 924715866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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