Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_H04
         (436 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            25   0.37 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   0.85 
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   3.4  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           22   3.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   3.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   4.5  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   6.0  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               21   7.9  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   7.9  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   7.9  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 25.0 bits (52), Expect = 0.37
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 3/36 (8%)
 Frame = +1

Query: 238 EESHQGPS*NKSSSRKTASSHQGKC---WLCLHPWR 336
           +   QGP  + + +  + S H   C   W+C H WR
Sbjct: 350 QSKDQGPPNDGNGNILSPSIHDNICSNGWICEHRWR 385


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 0.85
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +1

Query: 211 CAHGQKHHDEESHQGPS*NKSSSRKTASS 297
           C  G+  HD++    P  + SSS ++A S
Sbjct: 430 CLDGKLPHDDQPPLSPQSDSSSSSRSAES 458


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 111 NCWTNTQN 134
           NCWT T+N
Sbjct: 240 NCWTQTEN 247


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 111 NCWTNTQN 134
           NCWT T+N
Sbjct: 111 NCWTQTEN 118


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +3

Query: 111 NCWTNTQN 134
           NCWT T+N
Sbjct: 240 NCWTQTEN 247


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +2

Query: 80  WKSNYFVKIIQLLDEYP 130
           W+   F  ++++LDE+P
Sbjct: 862 WRHWKFPNLVEVLDEFP 878



 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = -1

Query: 67  LPTHLGLSEVGTSEKFKDKTLV 2
           + TH+GL    ++  +KDK ++
Sbjct: 321 IATHMGLDTRTSTSLWKDKAMI 342


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/45 (22%), Positives = 23/45 (51%)
 Frame = +2

Query: 161 GSQQMQQIRISLRGHSIVLMGKNTMMRKAIKDHLETNPALEKLLP 295
           G+QQ  +++++L    +        MRK  ++   T+  L +++P
Sbjct: 356 GTQQSVELKLALDQEQLKSKKLEESMRKLDEEMKRTDELLYQMIP 400


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = -1

Query: 358 FITHINKISTGEDKANISLDVRKQFFESWICFKMVLDG 245
           FI  I  I     +A+I  D RK+   SW   K +  G
Sbjct: 9   FILVITLIFLYFGEADIKKDCRKESKVSWAALKKMKAG 46


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -1

Query: 382 GLDFVLQQFITHINKISTGEDKANISLDVRKQFFESWICFKMVLDG 245
           GLD    QF T    I+   D+    L  RK+ F + +CF   L G
Sbjct: 388 GLD---SQFCTVEGFITAAVDEWPRLLRKRKELFIAIVCFVSYLIG 430


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -1

Query: 382 GLDFVLQQFITHINKISTGEDKANISLDVRKQFFESWICFKMVLDG 245
           GLD    QF T    I+   D+    L  RK+ F + +CF   L G
Sbjct: 441 GLD---SQFCTVEGFITAAVDEWPRLLRKRKELFIAIVCFVSYLIG 483


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,314
Number of Sequences: 438
Number of extensions: 2896
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11368164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)