Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_H03
         (325 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119552-1|AAM50206.1|  321|Drosophila melanogaster GH27568p pro...    39   0.001
AE014298-2011|AAF48353.2|  321|Drosophila melanogaster CG32597-P...    39   0.001
AY071115-1|AAL48737.1|  497|Drosophila melanogaster RE16861p pro...    26   9.7  
AE014134-780|AAN10337.1|  497|Drosophila melanogaster CG15626-PB...    26   9.7  
AE014134-779|AAF50975.1|  497|Drosophila melanogaster CG15626-PA...    26   9.7  

>AY119552-1|AAM50206.1|  321|Drosophila melanogaster GH27568p
           protein.
          Length = 321

 Score = 39.1 bits (87), Expect = 0.001
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +1

Query: 139 DNTLHFVHWCRYGETPQEARMRQISLTTSKTPMII 243
           +N  HFV+WCRYG   Q+ R RQ+  TTS   +++
Sbjct: 285 NNNKHFVYWCRYGSRQQDLRKRQV--TTSANHVLL 317



 Score = 37.9 bits (84), Expect = 0.003
 Identities = 15/36 (41%), Positives = 25/36 (69%)
 Frame = +2

Query: 17  WKKDSVIRINNVDDKQETPNSEKDIRAKLDMATKSR 124
           W     +RINN  DK++ P++EKDIR ++ +A K++
Sbjct: 245 WSHGWELRINNFADKEKVPHNEKDIRNQVSVARKAK 280


>AE014298-2011|AAF48353.2|  321|Drosophila melanogaster CG32597-PA
           protein.
          Length = 321

 Score = 39.1 bits (87), Expect = 0.001
 Identities = 16/35 (45%), Positives = 23/35 (65%)
 Frame = +1

Query: 139 DNTLHFVHWCRYGETPQEARMRQISLTTSKTPMII 243
           +N  HFV+WCRYG   Q+ R RQ+  TTS   +++
Sbjct: 285 NNNKHFVYWCRYGSRQQDLRKRQV--TTSANHVLL 317



 Score = 37.9 bits (84), Expect = 0.003
 Identities = 15/36 (41%), Positives = 25/36 (69%)
 Frame = +2

Query: 17  WKKDSVIRINNVDDKQETPNSEKDIRAKLDMATKSR 124
           W     +RINN  DK++ P++EKDIR ++ +A K++
Sbjct: 245 WSHGWELRINNFADKEKVPHNEKDIRNQVSVARKAK 280


>AY071115-1|AAL48737.1|  497|Drosophila melanogaster RE16861p
           protein.
          Length = 497

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +2

Query: 47  NVDDKQETPNSEKDIRAKLDMATKSRFERNWTIPC-ISSIGAVMER 181
           ++DD+    N+E++ R +L    K R+ER    P  + S  A M R
Sbjct: 27  HIDDEVNRQNAEQEHRQQLRRTDKDRYERARRSPSPVPSSAAAMIR 72


>AE014134-780|AAN10337.1|  497|Drosophila melanogaster CG15626-PB,
           isoform B protein.
          Length = 497

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +2

Query: 47  NVDDKQETPNSEKDIRAKLDMATKSRFERNWTIPC-ISSIGAVMER 181
           ++DD+    N+E++ R +L    K R+ER    P  + S  A M R
Sbjct: 27  HIDDEVNRQNAEQEHRQQLRRTDKDRYERARRSPSPVPSSAAAMIR 72


>AE014134-779|AAF50975.1|  497|Drosophila melanogaster CG15626-PA,
           isoform A protein.
          Length = 497

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +2

Query: 47  NVDDKQETPNSEKDIRAKLDMATKSRFERNWTIPC-ISSIGAVMER 181
           ++DD+    N+E++ R +L    K R+ER    P  + S  A M R
Sbjct: 27  HIDDEVNRQNAEQEHRQQLRRTDKDRYERARRSPSPVPSSAAAMIR 72


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,540,243
Number of Sequences: 53049
Number of extensions: 306294
Number of successful extensions: 838
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 695070486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)