Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_H03
(325 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 28 1.8
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 28 1.8
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 28 1.8
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 28 1.8
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 28 1.8
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 28 1.8
Z66495-5|CAA91272.1| 501|Caenorhabditis elegans Hypothetical pr... 27 3.1
U53155-4|AAC48265.1| 619|Caenorhabditis elegans Hypothetical pr... 27 3.1
AF038613-2|AAB92049.1| 477|Caenorhabditis elegans Cytochrome p4... 27 3.1
Z81454-8|CAD60404.1| 330|Caenorhabditis elegans Hypothetical pr... 26 5.4
U80027-3|AAC48131.1| 350|Caenorhabditis elegans Serpentine rece... 26 5.4
AL032647-7|CAA21691.2| 360|Caenorhabditis elegans Hypothetical ... 26 5.4
AF022980-11|AAG24189.1| 330|Caenorhabditis elegans Serpentine r... 26 5.4
Z81101-6|CAE53732.1| 840|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z81101-5|CAB03199.3| 705|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z77652-7|CAB01119.1| 341|Caenorhabditis elegans Hypothetical pr... 26 7.2
Z72509-5|CAA96649.1| 294|Caenorhabditis elegans Hypothetical pr... 26 7.2
AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical... 26 7.2
AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein. 26 7.2
AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical ... 26 7.2
AF024503-3|AAG24098.3| 331|Caenorhabditis elegans Serpentine re... 26 7.2
AF016446-13|AAC24172.1| 349|Caenorhabditis elegans Seven tm rec... 26 7.2
AB125702-1|BAD01496.1| 705|Caenorhabditis elegans D2-like dopam... 26 7.2
AB125701-1|BAD01495.1| 840|Caenorhabditis elegans D2-like dopam... 26 7.2
Z81082-2|CAE17818.1| 124|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z78065-9|CAI79172.1| 273|Caenorhabditis elegans Hypothetical pr... 25 9.5
Z78064-11|CAI79210.1| 273|Caenorhabditis elegans Hypothetical p... 25 9.5
AF036703-5|AAY86288.1| 106|Caenorhabditis elegans Hypothetical ... 25 9.5
AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical ... 25 9.5
AC024793-6|AAF60688.1| 162|Caenorhabditis elegans Hypothetical ... 25 9.5
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 23 KDSVIRINNVDDKQETPNSEKDIRAK 100
+D+++ + QETPNSE DI K
Sbjct: 1112 EDTIVENLEIKKNQETPNSEHDIEMK 1137
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 23 KDSVIRINNVDDKQETPNSEKDIRAK 100
+D+++ + QETPNSE DI K
Sbjct: 1159 EDTIVENLEIKKNQETPNSEHDIEMK 1184
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical protein
F11A10.1a protein.
Length = 1291
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 23 KDSVIRINNVDDKQETPNSEKDIRAK 100
+D+++ + QETPNSE DI K
Sbjct: 1161 EDTIVENLEIKKNQETPNSEHDIEMK 1186
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 23 KDSVIRINNVDDKQETPNSEKDIRAK 100
+D+++ + QETPNSE DI K
Sbjct: 1112 EDTIVENLEIKKNQETPNSEHDIEMK 1137
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical protein
F11A10.1b protein.
Length = 1289
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 23 KDSVIRINNVDDKQETPNSEKDIRAK 100
+D+++ + QETPNSE DI K
Sbjct: 1159 EDTIVENLEIKKNQETPNSEHDIEMK 1184
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical protein
F11A10.1a protein.
Length = 1291
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 23 KDSVIRINNVDDKQETPNSEKDIRAK 100
+D+++ + QETPNSE DI K
Sbjct: 1161 EDTIVENLEIKKNQETPNSEHDIEMK 1186
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expression
abnormal protein protein.
Length = 1291
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 23 KDSVIRINNVDDKQETPNSEKDIRAK 100
+D+++ + QETPNSE DI K
Sbjct: 1161 EDTIVENLEIKKNQETPNSEHDIEMK 1186
>Z66495-5|CAA91272.1| 501|Caenorhabditis elegans Hypothetical
protein C36A4.6 protein.
Length = 501
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = +3
Query: 69 LPTARKISELSWIWQL--SPGSRGTGQYPAFRPLVPLW---RDSTRGSHATDQLN 218
LP + + ELSW+W+ + P + LV L+ R G+ +TD LN
Sbjct: 230 LPVSLILPELSWLWRFLYKFSDLSAAELPLVKGLVDLYDRRRAGEGGNDSTDLLN 284
>U53155-4|AAC48265.1| 619|Caenorhabditis elegans Hypothetical
protein ZC513.3 protein.
Length = 619
Score = 27.1 bits (57), Expect = 3.1
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +2
Query: 53 DDKQETPNSEKDIRAKLDMATKSRFERNWTIPCISSIGAVMERLHKRL 196
+ ++ PN + +R K +K+ R+ T+P + +E HK+L
Sbjct: 549 EKSEKFPNVSRILRQKTSWVSKNCMSRSATVPRCDKLPMTVEVPHKKL 596
>AF038613-2|AAB92049.1| 477|Caenorhabditis elegans Cytochrome p450
family protein 25A5 protein.
Length = 477
Score = 27.1 bits (57), Expect = 3.1
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = +3
Query: 69 LPTARKISELSWIWQL--SPGSRGTGQYPAFRPLVPLW---RDSTRGSHATDQLN 218
LP + + ELSW+W+ + P + LV L+ R G+ +TD LN
Sbjct: 206 LPVSLILPELSWLWRFLYKFSDLSAAELPLVKGLVDLYDRRRAGEGGNDSTDLLN 260
>Z81454-8|CAD60404.1| 330|Caenorhabditis elegans Hypothetical
protein B0391.12 protein.
Length = 330
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 302 VFIVASSKGPKRLNDYHQKMIIIGVFDVV 216
+ I+ K PK+L +Y MI I VF+++
Sbjct: 22 LIILIWKKSPKKLGNYKILMIYIAVFEIL 50
>U80027-3|AAC48131.1| 350|Caenorhabditis elegans Serpentine
receptor, class j protein7 protein.
Length = 350
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -1
Query: 124 PGLSCHIQLSSDIFLAVGSLLLVVHVIYAYYRVLLP 17
P L H + F+++ LL++H +Y Y + P
Sbjct: 86 PELGQHAMSNRCGFISISYALLIIHFVYRYMALFYP 121
>AL032647-7|CAA21691.2| 360|Caenorhabditis elegans Hypothetical
protein Y57A10B.4 protein.
Length = 360
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = +3
Query: 99 SWIWQLSPGSRGTGQYPAFRPLVPLWRDSTRGSHATDQLNDVENTY 236
+WI G+ G G+YP R W + D L D+ + Y
Sbjct: 83 AWIMLYQTGTIGIGKYPD-RAYFAWWTEDREKMVLVDDLKDIMDLY 127
>AF022980-11|AAG24189.1| 330|Caenorhabditis elegans Serpentine
receptor, class j protein49 protein.
Length = 330
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 133 PLEPGLSCHIQLSSDIFLAVGSLLLVVHVIYAY 35
P P L+ H+ L+ LA +L++H IY Y
Sbjct: 82 PQSPQLNFHLLLARCSMLAASYGVLLIHFIYRY 114
>Z81101-6|CAE53732.1| 840|Caenorhabditis elegans Hypothetical
protein K09G1.4b protein.
Length = 840
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 118 LSCHIQLSSDIFLAVGSLLLVVHVIYAYYR-VLLP 17
L C I ++SD+ + S+LL+ + + YR V LP
Sbjct: 109 LMCDIYMASDVCCSTASILLLAVISFDRYRAVSLP 143
>Z81101-5|CAB03199.3| 705|Caenorhabditis elegans Hypothetical
protein K09G1.4a protein.
Length = 705
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 118 LSCHIQLSSDIFLAVGSLLLVVHVIYAYYR-VLLP 17
L C I ++SD+ + S+LL+ + + YR V LP
Sbjct: 109 LMCDIYMASDVCCSTASILLLAVISFDRYRAVSLP 143
>Z77652-7|CAB01119.1| 341|Caenorhabditis elegans Hypothetical
protein C06B3.10 protein.
Length = 341
Score = 25.8 bits (54), Expect = 7.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 302 VFIVASSKGPKRLNDYHQKMIIIGVFDV 219
+ I+ K PK L Y MI I +FD+
Sbjct: 22 LIILIIKKSPKTLGSYKILMIYIAIFDI 49
>Z72509-5|CAA96649.1| 294|Caenorhabditis elegans Hypothetical
protein F32G8.5 protein.
Length = 294
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 193 PLVESLHNGTNGRNAGYCPVP 131
P + NG G +AGYCP P
Sbjct: 256 PAGQKGENGMPGLDAGYCPCP 276
>AL033514-22|CAA22106.3| 1353|Caenorhabditis elegans Hypothetical
protein Y75B8A.22 protein.
Length = 1353
Score = 25.8 bits (54), Expect = 7.2
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 8 GAFWKKDSVIRINNVDDKQETPNSEKDIRAKLDMATKSRFERNWTIPCISSIGAVMERLH 187
GA K +++ K + SE+D+R++ D +K +R W S G V++ L
Sbjct: 518 GALKKVTKKVKVRKATKKSKM--SEEDVRSEFDGMSKKDLDRLWE----ESKGLVLQILK 571
Query: 188 KRL 196
K +
Sbjct: 572 KEV 574
>AF183401-1|AAF13189.1| 1353|Caenorhabditis elegans TIM-1 protein.
Length = 1353
Score = 25.8 bits (54), Expect = 7.2
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 8 GAFWKKDSVIRINNVDDKQETPNSEKDIRAKLDMATKSRFERNWTIPCISSIGAVMERLH 187
GA K +++ K + SE+D+R++ D +K +R W S G V++ L
Sbjct: 518 GALKKVTKKVKVRKATKKSKM--SEEDVRSEFDGMSKKDLDRLWE----ESKGLVLQILK 571
Query: 188 KRL 196
K +
Sbjct: 572 KEV 574
>AF106573-7|AAC78158.1| 838|Caenorhabditis elegans Hypothetical
protein F52D2.6 protein.
Length = 838
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 123 GSRGTGQYPAFRPLVPLWRDSTRGSHATDQLND--VENTYDYHL 248
G R + YP+ +P WR RG H + + N N ++H+
Sbjct: 193 GMRSSKPYPS---ALPNWRRKRRGRHPSSRFNQEVATNDMEHHI 233
>AF024503-3|AAG24098.3| 331|Caenorhabditis elegans Serpentine
receptor, class j protein6 protein.
Length = 331
Score = 25.8 bits (54), Expect = 7.2
Identities = 8/23 (34%), Positives = 15/23 (65%)
Frame = -1
Query: 85 FLAVGSLLLVVHVIYAYYRVLLP 17
F+A+ LL++H +Y Y+ + P
Sbjct: 96 FIAISYALLIIHFVYRYFILFHP 118
>AF016446-13|AAC24172.1| 349|Caenorhabditis elegans Seven tm
receptor protein 211 protein.
Length = 349
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -3
Query: 275 PKRLNDYHQKMIIIGVFDVVKLI 207
PK + DY M+ I VF+++ I
Sbjct: 35 PKEIGDYKNLMLFISVFEIIYAI 57
>AB125702-1|BAD01496.1| 705|Caenorhabditis elegans D2-like dopamine
receptor shortvariant protein.
Length = 705
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 118 LSCHIQLSSDIFLAVGSLLLVVHVIYAYYR-VLLP 17
L C I ++SD+ + S+LL+ + + YR V LP
Sbjct: 109 LMCDIYMASDVCCSTASILLLAVISFDRYRAVSLP 143
>AB125701-1|BAD01495.1| 840|Caenorhabditis elegans D2-like dopamine
receptor longvariant protein.
Length = 840
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 118 LSCHIQLSSDIFLAVGSLLLVVHVIYAYYR-VLLP 17
L C I ++SD+ + S+LL+ + + YR V LP
Sbjct: 109 LMCDIYMASDVCCSTASILLLAVISFDRYRAVSLP 143
>Z81082-2|CAE17818.1| 124|Caenorhabditis elegans Hypothetical
protein F42G4.7 protein.
Length = 124
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 133 ELDNTLHFVHWCRYGETPQEARMRQISLTTSK 228
E D+T H VH YG TP+ ++ + +T ++
Sbjct: 84 ESDDTPHNVHLMSYGTTPRPSQKQPGPITKTQ 115
>Z78065-9|CAI79172.1| 273|Caenorhabditis elegans Hypothetical
protein F57B1.8 protein.
Length = 273
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 54 STLFMRITESFFQKAP 7
+TLF ITESF Q AP
Sbjct: 78 ATLFAMITESFVQSAP 93
>Z78064-11|CAI79210.1| 273|Caenorhabditis elegans Hypothetical
protein F57B1.8 protein.
Length = 273
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2
Query: 54 STLFMRITESFFQKAP 7
+TLF ITESF Q AP
Sbjct: 78 ATLFAMITESFVQSAP 93
>AF036703-5|AAY86288.1| 106|Caenorhabditis elegans Hypothetical
protein T11F8.5 protein.
Length = 106
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 133 ELDNTLHFVHWCRYGETPQEARMRQISLTTSK 228
E D+T H VH YG TP+ ++ + +T ++
Sbjct: 66 ESDDTPHNVHLMSYGTTPRPSQKQPGPITKTQ 97
>AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical
protein Y65B4BL.3 protein.
Length = 347
Score = 25.4 bits (53), Expect = 9.5
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 108 WQLSPGSRGT-GQYPAFRPLVPLWRDSTRGSHATDQLNDVENTY 236
WQ + +RGT Y R W ++ R ++ Q +DV+N Y
Sbjct: 304 WQAANETRGTVSSYSQIRG----WNNTIRSTNTMRQRDDVDNDY 343
>AC024793-6|AAF60688.1| 162|Caenorhabditis elegans Hypothetical
protein Y48G1BL.5 protein.
Length = 162
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 133 ELDNTLHFVHWCRYGETPQEARMRQISLTTSK 228
E D+T H VH YG TP+ ++ + +T ++
Sbjct: 122 ESDDTPHNVHLMSYGTTPRPSQKQPGPITKTQ 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,917,992
Number of Sequences: 27780
Number of extensions: 156276
Number of successful extensions: 566
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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