Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_H03
         (325 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor prot...    24   0.53 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   3.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   4.9  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    20   6.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   8.6  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   8.6  

>S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor
           protein.
          Length = 85

 Score = 23.8 bits (49), Expect = 0.53
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 169 GTNGRNAGYCPVPLEPGLSCHIQLSSDIFLAVGSL 65
           GT G +     +  E GL  H++LSSD ++  G L
Sbjct: 51  GTCGSHIIIVGLFYEFGLITHVKLSSDWYMGQGKL 85


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 193 PLVESLHNGTNGRNAGYCPVPLEPGLSCHIQLSSDIFLA 77
           P +E   N  +G N      PL+P +      S++ FLA
Sbjct: 422 PGMEEPTNTASGSNEDEDETPLDPVVVISNDKSTEFFLA 460


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 183 STRGSHATDQLNDVENTYD 239
           S + +H T++ ND   TYD
Sbjct: 311 SDKENHKTEEPNDEVATYD 329


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 20.2 bits (40), Expect = 6.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 192 GSHATDQLNDVENTYD 239
           GSH    LND+ +TY+
Sbjct: 21  GSHEKRLLNDLLDTYN 36


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 184 ESLHNGTNG 158
           +S HNGTNG
Sbjct: 407 KSEHNGTNG 415


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.8 bits (39), Expect = 8.6
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 184 ESLHNGTNG 158
           +S HNGTNG
Sbjct: 497 KSEHNGTNG 505


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,771
Number of Sequences: 438
Number of extensions: 1691
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7093251
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)