Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_H02
         (318 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060755-1|AAL28303.1|  230|Drosophila melanogaster GH20817p pro...    42   2e-04
AE013599-923|AAF58898.1|  230|Drosophila melanogaster CG1648-PA,...    42   2e-04
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros...    27   3.9  

>AY060755-1|AAL28303.1|  230|Drosophila melanogaster GH20817p
           protein.
          Length = 230

 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 17/38 (44%), Positives = 28/38 (73%)
 Frame = +3

Query: 204 MFSVIAGAFRSIGEKTASLFDRKTTDAEQIAQDKVREA 317
           MFS I+ + ++ G+KTA+LF +K  +AE++A +K  EA
Sbjct: 1   MFSSISASLKNFGDKTANLFSKKKDEAEKLANEKAAEA 38


>AE013599-923|AAF58898.1|  230|Drosophila melanogaster CG1648-PA,
           isoform A protein.
          Length = 230

 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 17/38 (44%), Positives = 28/38 (73%)
 Frame = +3

Query: 204 MFSVIAGAFRSIGEKTASLFDRKTTDAEQIAQDKVREA 317
           MFS I+ + ++ G+KTA+LF +K  +AE++A +K  EA
Sbjct: 1   MFSSISASLKNFGDKTANLFSKKKDEAEKLANEKAAEA 38


>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
           Drosophila melanogastercopia-like element 17.6. ).
          Length = 1058

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 17/66 (25%), Positives = 32/66 (48%)
 Frame = +1

Query: 16  VRTSVELRTLKVFLANRAAVSPIVAHYSLYSEYIQCTTVLSFVQYLFKSDHTVLQCIITE 195
           +R+++ L+ +  +   +  +  + AH  L    IQ TT L    Y F +   ++Q II E
Sbjct: 735 LRSTILLKNITTYAEFKELI--LTAHEKLLHPGIQKTTKLFGETYYFPNSQLLIQNIINE 792

Query: 196 TPKCSV 213
              C++
Sbjct: 793 CSICNL 798


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,335,003
Number of Sequences: 53049
Number of extensions: 245320
Number of successful extensions: 504
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 652945002
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)