Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_H01
(452 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 26 2.3
SPCC737.06c |||glutamate-cysteine ligase regulatory subunit |Sch... 26 3.1
SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyc... 26 3.1
SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces pombe... 25 4.1
SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|c... 25 5.4
SPBC20F10.04c |nse4|rad62|Smc5-6 complex non-SMC subunit Nse4|Sc... 25 5.4
SPAC4G8.06c |trm12||tRNA methyltransferase Trm12 |Schizosaccharo... 25 5.4
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl... 25 5.4
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 25 5.4
SPAC1002.11 |gaa1||GPI-anchor transamidase complex subunit Gaa1 ... 25 5.4
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|... 25 5.4
SPBC336.14c |ppk26||serine/threonine protein kinase Ppk26|Schizo... 25 7.2
SPBC646.07c |||enoyl reductase|Schizosaccharomyces pombe|chr 2||... 25 7.2
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 24 9.5
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 24 9.5
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 24 9.5
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 24 9.5
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 24 9.5
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 24 9.5
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 24 9.5
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 24 9.5
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 24 9.5
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 24 9.5
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 24 9.5
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 26.2 bits (55), Expect = 2.3
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 440 LLSSLAYFVGIYC*VTVRFGLDIFFTISFGDWRLVRSFLLN 318
L +S F +Y V R L + I G W ++R+ LLN
Sbjct: 764 LKTSRQIFHRMYAYVVYRIALSLHLEIFLGLWLIIRNQLLN 804
>SPCC737.06c |||glutamate-cysteine ligase regulatory subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 287
Score = 25.8 bits (54), Expect = 3.1
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +1
Query: 190 NSCAVKSNASDPQIQDSIKKVKNWFSKADKKPKTPAVYLGPVSFKRKDLTNRQSPNEIVK 369
N+ +KSN + +++K K + D+ K L PV+ K + L +Q EI+
Sbjct: 26 NASRIKSNLELVKALENVKLTK-FTGDGDENLKKNIKVLVPVNEKPQKLDGKQEEYEIIV 84
Query: 370 KI 375
K+
Sbjct: 85 KL 86
>SPAC1071.10c |pma1||P-type proton ATPase Pma1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 919
Score = 25.8 bits (54), Expect = 3.1
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 440 LLSSLAYFVGIYC*VTVRFGLDIFFTISFGDWRLVRSFLLN 318
L +S F +Y V R L + I G W ++R+ LLN
Sbjct: 676 LKTSRQIFHRMYSYVVYRIALSLHLEIFLGLWLIIRNQLLN 716
>SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 422
Score = 25.4 bits (53), Expect = 4.1
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 196 CAVKSNASDPQIQDSIKKVKNWFSKA 273
CA ++ AS Q +IKK+ N FSK+
Sbjct: 36 CAARNVASKDQEAVAIKKITNVFSKS 61
>SPAC607.08c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 579
Score = 25.0 bits (52), Expect = 5.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 170 ILSSLILPFLTLSVLKVSRFKGQSWQI 90
IL+ L LS+LKV G SW+I
Sbjct: 339 ILAPLAAALWPLSLLKVGNILGNSWRI 365
>SPBC20F10.04c |nse4|rad62|Smc5-6 complex non-SMC subunit
Nse4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 300
Score = 25.0 bits (52), Expect = 5.4
Identities = 17/68 (25%), Positives = 40/68 (58%), Gaps = 8/68 (11%)
Frame = +1
Query: 265 SKADKKPKTPAVYLGPVSFKRKD--LTNRQ----SPNEIVK--KISKPNLTVTQQYIPTK 420
S +K+P + + +GP+SF++K+ + R+ +PN + + +++ N+T TQ+ TK
Sbjct: 123 SNCEKQPASLNLMVGPLSFRKKERNIQRRERLQKAPNVLTQPTMLNERNIT-TQENNTTK 181
Query: 421 YASELNKI 444
++++
Sbjct: 182 NVLHISRL 189
>SPAC4G8.06c |trm12||tRNA methyltransferase Trm12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 418
Score = 25.0 bits (52), Expect = 5.4
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +1
Query: 151 NIKDDNMY-YGSEVNSCAVKSNASD 222
N+KD+++ Y SEVNSC K A +
Sbjct: 369 NVKDEDIETYSSEVNSCFSKMLAKN 393
>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
Plh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 623
Score = 25.0 bits (52), Expect = 5.4
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +1
Query: 307 GPVSFKRKDLTNRQSPNEIVKKISKPNLTVTQQYIPTKYASELNKI 444
GP S + D+ NEI+ K+S + +P +Y S++ +I
Sbjct: 571 GPRSAEHVDILGHSELNEIILKVSSGH----GDSVPNRYISDIQEI 612
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 25.0 bits (52), Expect = 5.4
Identities = 18/72 (25%), Positives = 31/72 (43%)
Frame = +1
Query: 205 KSNASDPQIQDSIKKVKNWFSKADKKPKTPAVYLGPVSFKRKDLTNRQSPNEIVKKISKP 384
KSNA+ P + K ++ + T + PV+ K D+ QS + K S P
Sbjct: 135 KSNANSPTSESPSKGFGSFINNHILHKNTSSHPSSPVNGKSSDIHKSQSYQHL--KNSPP 192
Query: 385 NLTVTQQYIPTK 420
N ++ +P +
Sbjct: 193 NSRTARKPVPRR 204
>SPAC1002.11 |gaa1||GPI-anchor transamidase complex subunit Gaa1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 581
Score = 25.0 bits (52), Expect = 5.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -2
Query: 448 RIFY*VH*HIL*VYIAELLLGLVWIFFLQFHSVI 347
R+F + H+ + ++ L+GL WIF L + +I
Sbjct: 10 RVFPFLQRHLFFLQLSLTLIGLSWIFILPRNEII 43
>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 25.0 bits (52), Expect = 5.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +1
Query: 265 SKADKKPKTPAVYLGPVSFKRKDLT 339
+KA K P +YL VS RKDLT
Sbjct: 207 NKALATDKDPPLYLHIVSHNRKDLT 231
>SPBC336.14c |ppk26||serine/threonine protein kinase
Ppk26|Schizosaccharomyces pombe|chr 2|||Manual
Length = 589
Score = 24.6 bits (51), Expect = 7.2
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = +1
Query: 97 QDCPLNLETLSTERVKN 147
QDC +N++T + +++KN
Sbjct: 258 QDCSINIDTSTVDKLKN 274
>SPBC646.07c |||enoyl reductase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 295
Score = 24.6 bits (51), Expect = 7.2
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -3
Query: 297 GWRFGFLVRFTEP-VLHFFY*ILNLR 223
GWR F++ + P V+H F+ ILN +
Sbjct: 82 GWRTVFMIEYLGPLVIHLFF-ILNYK 106
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.5
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +1
Query: 172 YYGSEVNSCAVKSNASDPQIQDSIKKVKNW 261
YY ++++ + + SD ++ IK +K+W
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHW 766
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.5
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +1
Query: 172 YYGSEVNSCAVKSNASDPQIQDSIKKVKNW 261
YY ++++ + + SD ++ IK +K+W
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHW 766
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.5
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +1
Query: 172 YYGSEVNSCAVKSNASDPQIQDSIKKVKNW 261
YY ++++ + + SD ++ IK +K+W
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHW 766
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.5
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +1
Query: 172 YYGSEVNSCAVKSNASDPQIQDSIKKVKNW 261
YY ++++ + + SD ++ IK +K+W
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHW 766
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.5
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +1
Query: 172 YYGSEVNSCAVKSNASDPQIQDSIKKVKNW 261
YY ++++ + + SD ++ IK +K+W
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHW 766
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.5
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +1
Query: 172 YYGSEVNSCAVKSNASDPQIQDSIKKVKNW 261
YY ++++ + + SD ++ IK +K+W
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHW 766
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.5
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +1
Query: 172 YYGSEVNSCAVKSNASDPQIQDSIKKVKNW 261
YY ++++ + + SD ++ IK +K+W
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHW 766
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.5
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +1
Query: 172 YYGSEVNSCAVKSNASDPQIQDSIKKVKNW 261
YY ++++ + + SD ++ IK +K+W
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHW 766
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.5
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +1
Query: 172 YYGSEVNSCAVKSNASDPQIQDSIKKVKNW 261
YY ++++ + + SD ++ IK +K+W
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHW 766
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.5
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +1
Query: 172 YYGSEVNSCAVKSNASDPQIQDSIKKVKNW 261
YY ++++ + + SD ++ IK +K+W
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHW 766
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect = 9.5
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +1
Query: 172 YYGSEVNSCAVKSNASDPQIQDSIKKVKNW 261
YY ++++ + + SD ++ IK +K+W
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHW 766
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,736,340
Number of Sequences: 5004
Number of extensions: 32732
Number of successful extensions: 125
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 125
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 168258430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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