BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_H01
(452 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 25 0.94
AY330173-1|AAQ16279.1| 202|Anopheles gambiae odorant-binding pr... 24 2.2
AJ618917-1|CAF01996.1| 199|Anopheles gambiae putative odorant-b... 24 2.2
AY187043-1|AAO39757.1| 171|Anopheles gambiae putative antennal ... 24 2.9
AY345586-1|AAR09143.1| 427|Anopheles gambiae myosuppressin rece... 23 3.8
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 22 8.8
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 22 8.8
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 25.4 bits (53), Expect = 0.94
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -1
Query: 440 LLSSLAYFVGIYC*VTVRFGLDIFFTISFGDWRLVRS 330
L +S+AYFVG+ ++ G+ I I+FG + L S
Sbjct: 2781 LTASIAYFVGMGLSLSASIGVMIGSGITFGYFALAAS 2817
>AY330173-1|AAQ16279.1| 202|Anopheles gambiae odorant-binding
protein AgamOBP46 protein.
Length = 202
Score = 24.2 bits (50), Expect = 2.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 85 TQICQDCPLNLETLSTE 135
T + DCP NL + STE
Sbjct: 168 TTVFSDCPTNLRSTSTE 184
>AJ618917-1|CAF01996.1| 199|Anopheles gambiae putative
odorant-binding protein OBPjj1 protein.
Length = 199
Score = 24.2 bits (50), Expect = 2.2
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 85 TQICQDCPLNLETLSTE 135
T + DCP NL + STE
Sbjct: 165 TTVFSDCPTNLRSTSTE 181
>AY187043-1|AAO39757.1| 171|Anopheles gambiae putative antennal
carrier protein AP-1 protein.
Length = 171
Score = 23.8 bits (49), Expect = 2.9
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = +1
Query: 109 LNLETLSTERVKNGNIKDDNMYYGSEVNSCAVKSNASDPQIQDSIKKVK 255
L L S R++NG I D + +E C + N++ +D + KV+
Sbjct: 40 LTLSGESNARIENGTIICDTLKCPAESFKCVIVKNST----KDDVNKVQ 84
>AY345586-1|AAR09143.1| 427|Anopheles gambiae myosuppressin
receptor protein.
Length = 427
Score = 23.4 bits (48), Expect = 3.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 344 RLVRSFLLNDTGPKYTAGVLGFLSALLNQFFTF 246
R++ + LL ++ G+LG LSA+L + F F
Sbjct: 320 RMLLAVLLLFLITEFPQGILGLLSAVLKKDFFF 352
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 22.2 bits (45), Expect = 8.8
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +1
Query: 316 SFKRKDLTNRQSPNEIVKKISKPNLTVTQQYIPTKYA 426
S+K DL + S E +KPNL+V +++ + A
Sbjct: 1062 SYKLPDLQYQISILEEKLNANKPNLSVIDEFLKKREA 1098
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 22.2 bits (45), Expect = 8.8
Identities = 13/38 (34%), Positives = 16/38 (42%)
Frame = +1
Query: 85 TQICQDCPLNLETLSTERVKNGNIKDDNMYYGSEVNSC 198
T IC +CP+ E +G D YGS V C
Sbjct: 791 TVICLECPVGYFGPRCELCSDGYYGDPTGVYGS-VRMC 827
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,049
Number of Sequences: 2352
Number of extensions: 7291
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 38694201
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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