Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_G23
(327 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55375-1|AAK82907.2| 199|Caenorhabditis elegans Neuronal calciu... 28 1.8
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 28 1.8
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 28 1.8
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 28 1.8
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 28 1.8
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 28 1.8
AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical ... 28 1.8
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 28 1.8
Z93385-10|CAB07643.1| 702|Caenorhabditis elegans Hypothetical p... 27 2.4
Z81114-7|CAB03290.1| 702|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z93378-1|CAB07582.1| 303|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 27 4.2
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 27 4.2
AF100669-7|AAK39263.2| 549|Caenorhabditis elegans Hypothetical ... 26 5.6
AF040655-12|AAB95039.1| 507|Caenorhabditis elegans Hypothetical... 26 5.6
AF025452-3|AAB70939.2| 198|Caenorhabditis elegans Hypothetical ... 26 5.6
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 26 7.4
U46669-6|AAM51526.1| 514|Caenorhabditis elegans Hypothetical pr... 26 7.4
U46669-5|AAA85746.3| 493|Caenorhabditis elegans Hypothetical pr... 26 7.4
AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ... 26 7.4
>U55375-1|AAK82907.2| 199|Caenorhabditis elegans Neuronal calcium
sensor familyprotein 3 protein.
Length = 199
Score = 27.9 bits (59), Expect = 1.8
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +2
Query: 44 KLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHE 208
K Q+ +Q K ++ L E ++Q + +LK Y DFV+ + K+ E
Sbjct: 3 KSQSKVQTKKKANKKLTTEEVQTLEQVTYFTKKELKKWYKDFVRDCPSGELKMEE 57
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 41 EKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHE 208
E+ ++ LKE+Q LA+E D+ ++KLA ++A + + AE + K+ E
Sbjct: 138 EERANTVEAQLKEAQLLAEEADRKYDEVARKLA-MVEADLERAEERAEAGENKIVE 192
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 41 EKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHE 208
E+ ++ LKE+Q LA+E D+ ++KLA ++A + + AE + K+ E
Sbjct: 138 EERANTVEAQLKEAQLLAEEADRKYDEVARKLA-MVEADLERAEERAEAGENKIVE 192
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 41 EKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHE 208
E+ ++ LKE+Q LA+E D+ ++KLA ++A + + AE + K+ E
Sbjct: 138 EERANTVEAQLKEAQLLAEEADRKYDEVARKLA-MVEADLERAEERAEAGENKIVE 192
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 41 EKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHE 208
E+ ++ LKE+Q LA+E D+ ++KLA ++A + + AE + K+ E
Sbjct: 138 EERANTVEAQLKEAQLLAEEADRKYDEVARKLA-MVEADLERAEERAEAGENKIVE 192
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 41 EKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHE 208
E+ ++ LKE+Q LA+E D+ ++KLA ++A + + AE + K+ E
Sbjct: 138 EERANTVEAQLKEAQLLAEEADRKYDEVARKLA-MVEADLERAEERAEAGENKIVE 192
>AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical
protein Y105E8B.1b protein.
Length = 193
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 41 EKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHE 208
E+ ++ LKE+Q LA+E D+ ++KLA ++A + + AE + K+ E
Sbjct: 47 EERANTVEAQLKEAQLLAEEADRKYDEVARKLA-MVEADLERAEERAEAGENKIVE 101
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +2
Query: 41 EKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHE 208
E+ ++ LKE+Q LA+E D+ ++KLA ++A + + AE + K+ E
Sbjct: 138 EERANTVEAQLKEAQLLAEEADRKYDEVARKLA-MVEADLERAEERAEAGENKIVE 192
>Z93385-10|CAB07643.1| 702|Caenorhabditis elegans Hypothetical
protein M01E5.6 protein.
Length = 702
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/38 (34%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Frame = +2
Query: 86 NLAKEVGVNMDQTSQKLAPKLKAA--YDDFVKHAEEVQ 193
+L KE+G+ DQ + AP++++A ++ VK+ E++Q
Sbjct: 411 DLRKELGLTQDQEIPRKAPRVESAETEENIVKNLEKLQ 448
>Z81114-7|CAB03290.1| 702|Caenorhabditis elegans Hypothetical
protein M01E5.6 protein.
Length = 702
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/38 (34%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Frame = +2
Query: 86 NLAKEVGVNMDQTSQKLAPKLKAA--YDDFVKHAEEVQ 193
+L KE+G+ DQ + AP++++A ++ VK+ E++Q
Sbjct: 411 DLRKELGLTQDQEIPRKAPRVESAETEENIVKNLEKLQ 448
>Z93378-1|CAB07582.1| 303|Caenorhabditis elegans Hypothetical
protein F19H8.2 protein.
Length = 303
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 34 ITREAANRHPEHTKGEPEPGEGSRRQHGSDLTET 135
+T++ N+H +H K G G R++H ++ ET
Sbjct: 251 VTQKPPNQHKKHMK----KGHGMRKEHNHNVNET 280
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 26.6 bits (56), Expect = 4.2
Identities = 18/72 (25%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = +2
Query: 44 KLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFV--KHAEEVQKKVHEAAT 217
+L + L SQN ++ ++ Q +++ KLK ++ ++A + Q+K+ EA
Sbjct: 840 QLVDGLMTILLISQNSPSDITISTHQKLEQVGKKLKQLLSEYEENQNALDEQRKITEALE 899
Query: 218 KQ*RALIARRVA 253
K+ +A + R A
Sbjct: 900 KRLQASESARDA 911
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 26.6 bits (56), Expect = 4.2
Identities = 12/49 (24%), Positives = 23/49 (46%)
Frame = +2
Query: 11 DVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLAPKLKAA 157
DVEK + + ++ + K + ++G +D TSQ + L+ A
Sbjct: 334 DVEKNIAEKVDDITKELEKSAKSLEETTDKIGSKIDNTSQAIKSNLEEA 382
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 19 ETSHRITREAANRHPEHTKGEPEPGEGSRRQHGS 120
E R T+E + HPEH + GEG R H S
Sbjct: 194 EHQKRSTQEVSG-HPEHHLVKRSGGEGGHRHHRS 226
>AF100669-7|AAK39263.2| 549|Caenorhabditis elegans Hypothetical
protein R11E3.1 protein.
Length = 549
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/48 (25%), Positives = 21/48 (43%)
Frame = +1
Query: 10 RRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSDLTETGAKTES 153
+++ T E R P+ T E G + + GSD + A ++S
Sbjct: 11 KKKSIRETTTDETQERRPDLTTASEEKGSEKKDEKGSDRKDESATSKS 58
>AF040655-12|AAB95039.1| 507|Caenorhabditis elegans Hypothetical
protein T24E12.1 protein.
Length = 507
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -1
Query: 117 SMLTPTSFARFWLSFS--VFWMAVCSF 43
S++ P F R L S VFW AVCS+
Sbjct: 296 SLVNPAQFLRQTLCCSACVFWRAVCSY 322
>AF025452-3|AAB70939.2| 198|Caenorhabditis elegans Hypothetical
protein B0454.5 protein.
Length = 198
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 99 SFARFWLSFSVFWMAVCSFSC 37
+ A F+L FS+FW+ + F C
Sbjct: 171 NIATFFLFFSIFWLFMSVFCC 191
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 85 EPGEGSRRQHGSDLTETGAKTESGI 159
E GE R+HG ET AKT + +
Sbjct: 132 EEGEAFAREHGLVFMETSAKTAANV 156
>U46669-6|AAM51526.1| 514|Caenorhabditis elegans Hypothetical
protein C41G11.4b protein.
Length = 514
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 2 HEADVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLA 139
HE+ +E T + L + + K QN+A E G + D ++ A
Sbjct: 306 HESPIESNVTQESDNLMARVPSKTKRLQNIAPE-GKSCDMERRRAA 350
>U46669-5|AAA85746.3| 493|Caenorhabditis elegans Hypothetical
protein C41G11.4a protein.
Length = 493
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 2 HEADVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDQTSQKLA 139
HE+ +E T + L + + K QN+A E G + D ++ A
Sbjct: 306 HESPIESNVTQESDNLMARVPSKTKRLQNIAPE-GKSCDMERRRAA 350
>AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical
protein Y87G2A.5 protein.
Length = 1050
Score = 25.8 bits (54), Expect = 7.4
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 74 KESQNLAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAA 214
KE++ AK ++ +KLA K AA D VK A+ +++ EAA
Sbjct: 17 KEAEKAAKLA--KFEEKQKKLAEKKAAASDKPVKEAKAKKEQTVEAA 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,271,134
Number of Sequences: 27780
Number of extensions: 93759
Number of successful extensions: 410
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 398409266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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