Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_G20
         (384 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair pro...    74   7e-14
BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p pro...    74   7e-14
AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p pro...    74   7e-14
AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA...    74   7e-14
Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein ( Dros...    29   1.6  
S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosom...    29   1.6  
AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p pro...    29   1.6  
AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA ...    29   1.6  

>M25772-1|AAA53372.1|  317|Drosophila melanogaster DNA repair
           protein protein.
          Length = 317

 Score = 73.7 bits (173), Expect = 7e-14
 Identities = 42/73 (57%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = -1

Query: 384 FKNLLAIAAVTEVDFKEATTIKEYIKDPSKFVXXXXXXXXXXXXXXXXXXXXXXXXXXES 205
           FKNLLAIAA TEV+FKEATTIKEYIKDPSKF                           ES
Sbjct: 245 FKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKPESES 304

Query: 204 -ESDDDMGFGLFD 169
            E DDDMGFGLFD
Sbjct: 305 EEEDDDMGFGLFD 317


>BT021447-1|AAX33595.1|  317|Drosophila melanogaster GH01513p
           protein.
          Length = 317

 Score = 73.7 bits (173), Expect = 7e-14
 Identities = 42/73 (57%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = -1

Query: 384 FKNLLAIAAVTEVDFKEATTIKEYIKDPSKFVXXXXXXXXXXXXXXXXXXXXXXXXXXES 205
           FKNLLAIAA TEV+FKEATTIKEYIKDPSKF                           ES
Sbjct: 245 FKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKPESES 304

Query: 204 -ESDDDMGFGLFD 169
            E DDDMGFGLFD
Sbjct: 305 EEEDDDMGFGLFD 317


>AY075528-1|AAL68335.1|  317|Drosophila melanogaster RE74511p
           protein.
          Length = 317

 Score = 73.7 bits (173), Expect = 7e-14
 Identities = 42/73 (57%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = -1

Query: 384 FKNLLAIAAVTEVDFKEATTIKEYIKDPSKFVXXXXXXXXXXXXXXXXXXXXXXXXXXES 205
           FKNLLAIAA TEV+FKEATTIKEYIKDPSKF                           ES
Sbjct: 245 FKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKPESES 304

Query: 204 -ESDDDMGFGLFD 169
            E DDDMGFGLFD
Sbjct: 305 EEEDDDMGFGLFD 317


>AE014296-3653|AAF51807.1|  317|Drosophila melanogaster CG7490-PA
           protein.
          Length = 317

 Score = 73.7 bits (173), Expect = 7e-14
 Identities = 42/73 (57%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
 Frame = -1

Query: 384 FKNLLAIAAVTEVDFKEATTIKEYIKDPSKFVXXXXXXXXXXXXXXXXXXXXXXXXXXES 205
           FKNLLAIAA TEV+FKEATTIKEYIKDPSKF                           ES
Sbjct: 245 FKNLLAIAATTEVEFKEATTIKEYIKDPSKFAAAASASAAPAAGGATEKKEEAKKPESES 304

Query: 204 -ESDDDMGFGLFD 169
            E DDDMGFGLFD
Sbjct: 305 EEEDDDMGFGLFD 317


>Y00504-1|CAA68557.1|  112|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for A-type ribosomal protein
           rp21C. ).
          Length = 112

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -1

Query: 204 ESDDDMGFGLFD 169
           +SDDDMGFGLFD
Sbjct: 101 QSDDDMGFGLFD 112


>S62170-1|AAB26902.1|  112|Drosophila melanogaster acidic ribosomal
           protein rpA2 protein.
          Length = 112

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -1

Query: 204 ESDDDMGFGLFD 169
           +SDDDMGFGLFD
Sbjct: 101 QSDDDMGFGLFD 112


>AY069125-1|AAL39270.1|  112|Drosophila melanogaster GH13422p
           protein.
          Length = 112

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -1

Query: 204 ESDDDMGFGLFD 169
           +SDDDMGFGLFD
Sbjct: 101 QSDDDMGFGLFD 112


>AE014134-102|AAF51499.1|  112|Drosophila melanogaster CG4087-PA
           protein.
          Length = 112

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = -1

Query: 204 ESDDDMGFGLFD 169
           +SDDDMGFGLFD
Sbjct: 101 QSDDDMGFGLFD 112


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,263,639
Number of Sequences: 53049
Number of extensions: 175797
Number of successful extensions: 337
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 333
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)