Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_G19
(396 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 36 0.002
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 29 0.20
SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|ch... 29 0.26
SPAC977.14c |||aldo/keto reductase, unknown biological role|Schi... 27 0.80
SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 1.1
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 1.4
SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces p... 27 1.4
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 27 1.4
SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 1.8
SPAC14C4.06c |||poly|Schizosaccharomyces pombe|chr 1|||Manual 26 2.4
SPAC5D6.04 |||auxin family transmembrane transporter |Schizosacc... 26 2.4
SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr 1||... 25 4.3
SPBC29A10.11c |vps902|vps9b|guanyl-nucleotide exchange factor Vp... 25 4.3
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 5.6
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 25 5.6
SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces... 24 7.4
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 24 7.4
SPAC20G8.10c ||SPAC3A12.01c|beclin family protein|Schizosaccharo... 24 7.4
SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr... 24 7.4
SPAC323.08 |||ribonuclease MRP complex subunit |Schizosaccharomy... 24 7.4
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 24 7.4
SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3 |Schizosa... 24 9.8
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 24 9.8
SPBC609.02 |ptn1||phosphatidylinositol-3,4,5-trisphosphate3-phos... 24 9.8
SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 24 9.8
SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces po... 24 9.8
SPAC3A12.05c |taf2||TATA-binding protein associated factor Taf2|... 24 9.8
SPAC27F1.08 |pdt1||Nramp family manganese ion transporter|Schizo... 24 9.8
SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyce... 24 9.8
SPBC2G2.08 |ade9||C-1-tetrahydrofolatesynthase/methylenetetrahyd... 24 9.8
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 35.9 bits (79), Expect = 0.002
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +2
Query: 212 DANVKMQTALSQDLLNKKDKQIEELNSICKQLKDKLSQLDIQLSE 346
D N+K QTA Q+LL+ K+K++E+ +I K LKD L+ Q+ E
Sbjct: 130 DQNLK-QTAQLQNLLSDKEKEVEKKITIIKDLKDALASSTHQVLE 173
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 29.5 bits (63), Expect = 0.20
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 245 QDLLNKKDKQIEELNSICKQLKDKLSQLDIQLSEKNQRLNVLE 373
+D + K + +I NS+ Q KD+L + + SE +++N LE
Sbjct: 129 EDQIEKLNSEISNQNSLILQKKDELEKSIQRCSELEEKINSLE 171
Score = 24.6 bits (51), Expect = 5.6
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 245 QDLLNKKDKQIEELNSICKQLKDKLSQLDIQLSEKNQRLNVLEKEV 382
++L ++ + QIE+LNS + Q +L + QR + LE+++
Sbjct: 122 ENLKHQFEDQIEKLNSEISNQNSLILQKKDELEKSIQRCSELEEKI 167
>SPAC27F1.02c |cdc8|fus4|tropomyosin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 161
Score = 29.1 bits (62), Expect = 0.26
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Frame = +2
Query: 266 DKQIEELNSICKQLKDKLSQLDIQLSEKNQ---RLNVLEKEVQ 385
+ Q+EEL KQL+ K DIQ +E Q ++ +LE+E++
Sbjct: 54 ESQLEELEEETKQLRLKADNEDIQKTEAEQLSRKVELLEEELE 96
>SPAC977.14c |||aldo/keto reductase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 351
Score = 27.5 bits (58), Expect = 0.80
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = +2
Query: 218 NVKMQTALSQDLLNKKDKQIEELNSICKQLKDKLSQLDIQLSEKN 352
NV M T + L+K D I ++ + ++LKD L+ ++++LSE++
Sbjct: 291 NVSMATLATAWSLHKGDYPIVGISKV-ERLKDALAAVELKLSEED 334
>SPAC4H3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 345
Score = 27.1 bits (57), Expect = 1.1
Identities = 13/63 (20%), Positives = 34/63 (53%)
Frame = +2
Query: 206 NMDANVKMQTALSQDLLNKKDKQIEELNSICKQLKDKLSQLDIQLSEKNQRLNVLEKEVQ 385
N+ ++KMQ A ++N+K + +E I ++ + +++ L + + + LE E +
Sbjct: 111 NVYDSLKMQKASVSSMVNRKQRAAKEEQKIQEEFERQITDLLEEQQQLKLEIERLEAETE 170
Query: 386 KSH 394
+++
Sbjct: 171 RAN 173
Score = 24.6 bits (51), Expect = 5.6
Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +2
Query: 110 MEEDKCRRETEFHXXXXXXXXXXXXXXXXXXXNMDANVKMQTALSQDLLNKK-DKQIEEL 286
M+E K R+E E +M N K + A + + ++ ++QI +L
Sbjct: 93 MQERKKRKELESAKNNLLNVYDSLKMQKASVSSM-VNRKQRAAKEEQKIQEEFERQITDL 151
Query: 287 NSICKQLKDKLSQLDIQLSEKNQRLNVLEKE 379
+QLK ++ +L+ + N EK+
Sbjct: 152 LEEQQQLKLEIERLEAETERANSETEQYEKQ 182
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 26.6 bits (56), Expect = 1.4
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +2
Query: 266 DKQIEELNSICKQLKDKLSQLDIQLSEKNQRLNVLEKE 379
DK ++++ + LK+K + L+ +SEK + N+L+ E
Sbjct: 815 DKLMKKIYHCEQSLKEKTNSLETLVSEKKELKNLLDAE 852
>SPBC21C3.20c |git1||C2 domain protein Git1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1098
Score = 26.6 bits (56), Expect = 1.4
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 269 KQIEELNSICKQLKDKLSQLDIQLSEKN 352
KQIE N++ Q+K+ LS IQ E+N
Sbjct: 32 KQIERENALLDQIKELLSIAIIQCHERN 59
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 26.6 bits (56), Expect = 1.4
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 263 KDKQIEELNSICKQLKDKLSQL-DIQLSEKNQRLNVLEKEVQKS 391
++K + +N +QLK +L D+ LSEK LN K+ K+
Sbjct: 149 EEKDVIPINPNAEQLKTLSKRLLDLALSEKTHSLNKASKKSNKN 192
>SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 615
Score = 26.2 bits (55), Expect = 1.8
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 143 TLSLFCICLLPSLTQYVLSHVFY 75
T+ ++ +C+L T YV+ H FY
Sbjct: 587 TMFIYYLCILVLATYYVMKHNFY 609
>SPAC14C4.06c |||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 307
Score = 25.8 bits (54), Expect = 2.4
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +1
Query: 166 KRAISSGEITTTKKYGCKCKNANSTFSRP 252
KRA++ + KY KC AN F+ P
Sbjct: 172 KRALTQTQEVPLCKYADKCSRANCIFAHP 200
>SPAC5D6.04 |||auxin family transmembrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 452
Score = 25.8 bits (54), Expect = 2.4
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 251 GLEKVLFAFLHLHPYFFVVVISPELIALFLVLKLY 147
GL + L L P F+V++ + ++ FL+ KL+
Sbjct: 70 GLNLKMLIDLSLLPVFYVIISAASILISFLLAKLF 104
>SPAC6F12.03c |fsv1||SNARE Fsv1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 247
Score = 25.0 bits (52), Expect = 4.3
Identities = 11/57 (19%), Positives = 31/57 (54%)
Frame = +2
Query: 218 NVKMQTALSQDLLNKKDKQIEELNSICKQLKDKLSQLDIQLSEKNQRLNVLEKEVQK 388
NV + + Q +LN++++ + + + ++ K ++ +LSE+N L+ + + +
Sbjct: 150 NVNVLAQMHQQMLNEQEESLGGIEASVQRQKRMGYAMNTELSEQNVLLDNMNNDADR 206
>SPBC29A10.11c |vps902|vps9b|guanyl-nucleotide exchange factor
Vps902 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 402
Score = 25.0 bits (52), Expect = 4.3
Identities = 11/34 (32%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +2
Query: 221 VKMQTALSQDLLNKKDKQIEELNSI-CKQLKDKL 319
+ Q Q LLN+KD+ ++++ I C+ L D++
Sbjct: 97 IDAQKKARQHLLNQKDEWMDQIEDIVCEYLYDRI 130
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 24.6 bits (51), Expect = 5.6
Identities = 10/47 (21%), Positives = 29/47 (61%)
Frame = +2
Query: 245 QDLLNKKDKQIEELNSICKQLKDKLSQLDIQLSEKNQRLNVLEKEVQ 385
Q L++K++ +EE S ++++++ +++++ K L EK+++
Sbjct: 195 QTLVSKREAALEEFQSKLLIRENEINKRELKMNGKEDDLKKREKDLE 241
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 24.6 bits (51), Expect = 5.6
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 275 IEELNSICKQLKDKLSQLDIQLSEKNQRLNVLEK 376
IEE + + KQL D +Q I S+ L+ LEK
Sbjct: 704 IEEHSKLTKQLDDIKNQFGIISSKNRDLLSELEK 737
>SPBP8B7.30c |thi5||transcription factor Thi5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 857
Score = 24.2 bits (50), Expect = 7.4
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 350 NQRLNVLEKEVQKSH 394
N +NVL KEVQ SH
Sbjct: 394 NNNINVLPKEVQLSH 408
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 24.2 bits (50), Expect = 7.4
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +2
Query: 215 ANVKMQTALSQDLLNKKDKQIEELNSICKQLKDKLSQLDIQLSEKNQRLNVLEKEVQK 388
+ +K + +L+ + IEE S + LK+K L Q+ ++ ++ EK V +
Sbjct: 320 SGMKSKMESRTNLMKQLQVNIEEKESQLQLLKEKRDSLKYQVENQDISISEFEKMVSE 377
>SPAC20G8.10c ||SPAC3A12.01c|beclin family
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 464
Score = 24.2 bits (50), Expect = 7.4
Identities = 13/42 (30%), Positives = 27/42 (64%)
Frame = +2
Query: 254 LNKKDKQIEELNSICKQLKDKLSQLDIQLSEKNQRLNVLEKE 379
+N+K+++IEE++ DKL +L +L E+ +++ E+E
Sbjct: 199 INEKEEKIEEIS----DETDKLQKLLRELDEEKEKVYAEEQE 236
>SPBC365.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 233
Score = 24.2 bits (50), Expect = 7.4
Identities = 15/63 (23%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 209 MDANVKMQTALSQDLLNKK-DKQIEELNSICKQLKDKLSQLDIQLSEKNQRLNVLEKEVQ 385
M + + + S + +KK DK+ + L K+++ K +L+ + ++K R + EK++
Sbjct: 1 MSSKLSKKKLKSLEYRSKKFDKKSQSLEEHEKKVQQKNEELEKKAADKISRDELPEKQLA 60
Query: 386 KSH 394
+S+
Sbjct: 61 QSN 63
>SPAC323.08 |||ribonuclease MRP complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 211
Score = 24.2 bits (50), Expect = 7.4
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +1
Query: 175 ISSGEITTTKKYGCKCKNANSTFSRPFKQKRQ 270
+SS IT ++ K KN+NST + K+ R+
Sbjct: 170 LSSSPITVSQGTKRKSKNSNSTVKKKKKRARK 201
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 24.2 bits (50), Expect = 7.4
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 227 MQTALSQDLLNKKDKQIEELNSICKQLKDKL---SQLDIQLSEKNQRLNVLEKEVQK 388
+QT + + D Q +L+ + + ++ L SQ + L +K +L +EK VQK
Sbjct: 1030 LQTEIEKKRAENDDLQ-SKLSVVSSEYENLLLISSQTNKSLEDKTNQLKYIEKNVQK 1085
Score = 23.8 bits (49), Expect = 9.8
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 212 DANVKMQTALS-QDLLNKKDKQIEELNSICKQLKDKLSQLDIQLSEKNQRLNVLEKEVQK 388
+ +K T S QD+L + EL + DK+ + D + + +L L ++++
Sbjct: 1661 ECKIKSNTVESLQDVLTSVQARNAELEDEVSRSVDKIRRRDDRCEHLSGKLKKLHSQLEE 1720
Query: 389 SH 394
H
Sbjct: 1721 QH 1722
>SPAC167.07c ||SPAC57A7.03c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1029
Score = 23.8 bits (49), Expect = 9.8
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3
Query: 64 CTFFLPYSFIVH 29
C+FFLP+ F +H
Sbjct: 638 CSFFLPFHFRIH 649
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1052
Score = 23.8 bits (49), Expect = 9.8
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +2
Query: 212 DANVKMQTALSQDLLNKKDKQIEELNSICKQLKDKLSQLDIQLSEKNQRLNVLEKE 379
+ N+ + +S N D +++ NSI + ++ Q DI+ E V E E
Sbjct: 884 EENIDISQDISMTETNAVDDEVQAENSILQDEVEETRQDDIEKDELEDIKEVKEDE 939
>SPBC609.02 |ptn1||phosphatidylinositol-3,4,
5-trisphosphate3-phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 348
Score = 23.8 bits (49), Expect = 9.8
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1
Query: 312 SFNCLHIEFNSSICLS 265
SF CL+I+ NSS+ LS
Sbjct: 206 SFKCLNIKKNSSLILS 221
>SPAPB15E9.02c |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 23.8 bits (49), Expect = 9.8
Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 2/20 (10%)
Frame = -3
Query: 88 VMYFMFHVCTFFLP--YSFI 35
+ + +F VC+FF P YSFI
Sbjct: 17 LFFRLFFVCSFFFPLLYSFI 36
>SPAC2F3.10 |||GARP complex subunit Vps54 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 949
Score = 23.8 bits (49), Expect = 9.8
Identities = 12/35 (34%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +2
Query: 239 LSQDLLNKKDKQ-IEELNSICKQLKDKLSQLDIQL 340
+S+D+ +++ + I +NSI QLK K ++L++ L
Sbjct: 313 VSEDVKDQRFLEAINGINSIVTQLKKKSTELNVDL 347
>SPAC3A12.05c |taf2||TATA-binding protein associated factor
Taf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1174
Score = 23.8 bits (49), Expect = 9.8
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 302 QLKDKLSQLDIQLSEKNQRLN 364
+LKD ++LDIQ + K +R++
Sbjct: 622 ELKDSFTKLDIQYNTKYKRIS 642
>SPAC27F1.08 |pdt1||Nramp family manganese ion
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 521
Score = 23.8 bits (49), Expect = 9.8
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 236 ALSQDLLNKKDKQIEELNSICKQLKDKLSQLDIQLSEK 349
+L LNKKD I ELN + D D+ L +K
Sbjct: 16 SLESSTLNKKDTAINELN---PEQNDTRRSTDLLLEDK 50
>SPCC188.04c |spc25||kinetochore protein Spc25|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 238
Score = 23.8 bits (49), Expect = 9.8
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 251 LLNKKDKQIEELNSICKQLKDKLSQLDIQLSEKNQRLNVLEKE 379
LLN K++ + +L+ I + K L+ + K +LEKE
Sbjct: 38 LLNNKNEYLRQLSEINEAQKKAEKSLEQTEARKQNFTELLEKE 80
>SPBC2G2.08 |ade9||C-1-
tetrahydrofolatesynthase/methylenetetrahydrofolatedehydr
ogenase/methylenetetrahydrofolatecyclohydrolase/formylte
trahydrofolatesynthetase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 969
Score = 23.8 bits (49), Expect = 9.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 230 AFLHLHPYFFVVVISPELIALFLVLKLYGTLS 135
AF+H P+ + + + +IA + LKL GT S
Sbjct: 657 AFVHAGPFANISIGASSIIADKIALKLAGTES 688
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,380,487
Number of Sequences: 5004
Number of extensions: 23272
Number of successful extensions: 136
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 136
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 132093910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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