Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_G19
         (396 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   0.31 
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   3.9  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   5.1  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   5.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   5.1  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              21   6.8  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   6.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   6.8  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   6.8  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    20   9.0  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               20   9.0  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 25.0 bits (52), Expect = 0.31
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +2

Query: 218 NVKMQTALSQDLLNKKDKQIEELNSICKQLKDK 316
           NVK Q A  QDLLNK+   I+ L  I + + ++
Sbjct: 19  NVK-QRAADQDLLNKQQDVIQLLQKISQPIPNQ 50


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 67  VCTFFLPYSFIVHSGTF*STLV 2
           V  FF P+SF++ +  + ST +
Sbjct: 362 VSRFFFPFSFLILNVVYWSTFL 383


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 163 RKRAISSGEITTTKKY 210
           R+ AI SGE   TK Y
Sbjct: 55  RQAAIQSGEYDRTKNY 70


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 214 CKCKNANSTFSRPF 255
           CKC      FSRP+
Sbjct: 43  CKCHLCGKAFSRPW 56


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +2

Query: 317 LSQLDIQLSEKNQRLNVL 370
           +SQL+IQL ++  RL  +
Sbjct: 323 VSQLEIQLQKERDRLTAM 340


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 87 SCILCSMSVH 58
          +C++CS SVH
Sbjct: 12 TCLICSPSVH 21


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 163 RKRAISSGEITTTKKY 210
           R+ AI SGE   TK Y
Sbjct: 54  RQAAIQSGEYDYTKNY 69


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 211 GCKCKNANSTFSRPFKQ 261
           GC+CK  NS     F Q
Sbjct: 434 GCECKTCNSKTKCCFAQ 450


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 163 RKRAISSGEITTTKKY 210
           R+ AI SGE   TK Y
Sbjct: 51  RQAAIQSGEYDHTKNY 66


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +1

Query: 163 RKRAISSGEITTTKKY 210
           R  AI SGE   TK Y
Sbjct: 56  RDAAIKSGEFDHTKNY 71


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +2

Query: 224 KMQTALSQDLLNKKDKQIEELN 289
           K+Q ALS+ ++N   + +++ N
Sbjct: 607 KLQIALSEFVINPHQQHLDQWN 628


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,688
Number of Sequences: 438
Number of extensions: 1826
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)