Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_G13
         (454 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    23   1.6  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   1.6  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   4.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   4.7  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   4.7  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    21   4.7  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    21   6.3  

>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = +2

Query: 188 SVKYALTGNEC*---DVNSLIKVDGKVRTDPVPAGF 286
           +V +A  G +C    D+   +K+  ++R DP   GF
Sbjct: 137 TVTFANLGIQCVKKKDIEEALKIREEIRVDPFRTGF 172


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = +2

Query: 188 SVKYALTGNEC*---DVNSLIKVDGKVRTDPVPAGF 286
           +V +A  G +C    D+   +K+  ++R DP   GF
Sbjct: 137 TVTFANLGIQCVKKKDIEEALKIREEIRVDPFRTGF 172


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +3

Query: 261 GLTQYRRDLWTLYPLRKQ*VIRLIYDVKGRFT 356
           GL   +R +W+ +P+ K   IR I + + R +
Sbjct: 304 GLPFPQRPIWSNFPIYKYKYIREIMNKESRIS 335


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +3

Query: 261 GLTQYRRDLWTLYPLRKQ*VIRLIYDVKGRFT 356
           GL   +R +W+ +P+ K   IR I + + R +
Sbjct: 304 GLPFPQRPIWSNFPIYKYKYIREIMNKESRIS 335


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -1

Query: 274 YWVSPHFPVHFDETVHILTLIAGE 203
           Y++  HFP  F E   I+   A E
Sbjct: 112 YYIWSHFPYVFGEAFCIIQSFAAE 135


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 363 RITPEEAKYKLCNVRRVATGPKSVP 437
           ++T EEAK  + N+R+V +     P
Sbjct: 26  KMTIEEAKKTIKNLRKVCSKKNDTP 50


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 48  GPKKHLKRLNAP 83
           GPK+HL+ L  P
Sbjct: 336 GPKEHLRSLGIP 347


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,778
Number of Sequences: 438
Number of extensions: 3053
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)