Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_G10
(551 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 63 2e-11
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 63 2e-11
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 63 2e-11
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 63 2e-11
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 63 2e-11
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 63 2e-11
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 63 2e-11
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 63 2e-11
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 63 2e-11
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 63 2e-11
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 63 2e-11
SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1 |Sc... 30 0.20
SPBC29A10.10c |||tRNA-splicing endonuclease positive effector |S... 27 1.8
SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subuni... 25 5.6
SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase Ubp16|Schizo... 25 5.6
SPBC713.03 |||D-lactate dehydrogenase |Schizosaccharomyces pombe... 25 5.6
SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces ... 25 5.6
SPAC23C11.11 |cka1|orb5|serine/threonine protein kinase Cka1|Sch... 25 7.4
SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr 3||... 25 9.8
SPAC26H5.07c |||seven transmembrane receptor-like protein|Schizo... 25 9.8
SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein Spo14|Sch... 25 9.8
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 63.3 bits (147), Expect = 2e-11
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +3
Query: 192 YIQYDYMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGI--KFKIVTDCQAF--EMT 359
Y Y S K S + Y+ + E LAII+S+K +R YL FKI+TD + +T
Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791
Query: 360 LRKKDLTTRVARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ R+ARW L LQ++ +E+ +R GS DALSR
Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR 831
Score = 39.9 bits (89), Expect = 2e-04
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 5 EEDTDFVFETPQQAAFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQRSTED 184
++D + + Q A + +K L S PVL+ FD L TDAS +A+ A+L Q+ +D
Sbjct: 671 KKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKH-DD 729
Query: 185 GQLHPV 202
+ +PV
Sbjct: 730 DKYYPV 735
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 63.3 bits (147), Expect = 2e-11
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +3
Query: 192 YIQYDYMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGI--KFKIVTDCQAF--EMT 359
Y Y S K S + Y+ + E LAII+S+K +R YL FKI+TD + +T
Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791
Query: 360 LRKKDLTTRVARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ R+ARW L LQ++ +E+ +R GS DALSR
Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR 831
Score = 39.9 bits (89), Expect = 2e-04
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 5 EEDTDFVFETPQQAAFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQRSTED 184
++D + + Q A + +K L S PVL+ FD L TDAS +A+ A+L Q+ +D
Sbjct: 671 KKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKH-DD 729
Query: 185 GQLHPV 202
+ +PV
Sbjct: 730 DKYYPV 735
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 63.3 bits (147), Expect = 2e-11
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +3
Query: 192 YIQYDYMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGI--KFKIVTDCQAF--EMT 359
Y Y S K S + Y+ + E LAII+S+K +R YL FKI+TD + +T
Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791
Query: 360 LRKKDLTTRVARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ R+ARW L LQ++ +E+ +R GS DALSR
Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR 831
Score = 39.9 bits (89), Expect = 2e-04
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 5 EEDTDFVFETPQQAAFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQRSTED 184
++D + + Q A + +K L S PVL+ FD L TDAS +A+ A+L Q+ +D
Sbjct: 671 KKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKH-DD 729
Query: 185 GQLHPV 202
+ +PV
Sbjct: 730 DKYYPV 735
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 63.3 bits (147), Expect = 2e-11
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +3
Query: 192 YIQYDYMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGI--KFKIVTDCQAF--EMT 359
Y Y S K S + Y+ + E LAII+S+K +R YL FKI+TD + +T
Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791
Query: 360 LRKKDLTTRVARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ R+ARW L LQ++ +E+ +R GS DALSR
Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR 831
Score = 39.9 bits (89), Expect = 2e-04
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 5 EEDTDFVFETPQQAAFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQRSTED 184
++D + + Q A + +K L S PVL+ FD L TDAS +A+ A+L Q+ +D
Sbjct: 671 KKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKH-DD 729
Query: 185 GQLHPV 202
+ +PV
Sbjct: 730 DKYYPV 735
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 63.3 bits (147), Expect = 2e-11
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +3
Query: 192 YIQYDYMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGI--KFKIVTDCQAF--EMT 359
Y Y S K S + Y+ + E LAII+S+K +R YL FKI+TD + +T
Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791
Query: 360 LRKKDLTTRVARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ R+ARW L LQ++ +E+ +R GS DALSR
Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR 831
Score = 39.9 bits (89), Expect = 2e-04
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 5 EEDTDFVFETPQQAAFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQRSTED 184
++D + + Q A + +K L S PVL+ FD L TDAS +A+ A+L Q+ +D
Sbjct: 671 KKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKH-DD 729
Query: 185 GQLHPV 202
+ +PV
Sbjct: 730 DKYYPV 735
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 63.3 bits (147), Expect = 2e-11
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +3
Query: 192 YIQYDYMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGI--KFKIVTDCQAF--EMT 359
Y Y S K S + Y+ + E LAII+S+K +R YL FKI+TD + +T
Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791
Query: 360 LRKKDLTTRVARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ R+ARW L LQ++ +E+ +R GS DALSR
Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR 831
Score = 39.9 bits (89), Expect = 2e-04
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 5 EEDTDFVFETPQQAAFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQRSTED 184
++D + + Q A + +K L S PVL+ FD L TDAS +A+ A+L Q+ +D
Sbjct: 671 KKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKH-DD 729
Query: 185 GQLHPV 202
+ +PV
Sbjct: 730 DKYYPV 735
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 63.3 bits (147), Expect = 2e-11
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +3
Query: 192 YIQYDYMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGI--KFKIVTDCQAF--EMT 359
Y Y S K S + Y+ + E LAII+S+K +R YL FKI+TD + +T
Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791
Query: 360 LRKKDLTTRVARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ R+ARW L LQ++ +E+ +R GS DALSR
Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR 831
Score = 39.9 bits (89), Expect = 2e-04
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 5 EEDTDFVFETPQQAAFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQRSTED 184
++D + + Q A + +K L S PVL+ FD L TDAS +A+ A+L Q+ +D
Sbjct: 671 KKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKH-DD 729
Query: 185 GQLHPV 202
+ +PV
Sbjct: 730 DKYYPV 735
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 63.3 bits (147), Expect = 2e-11
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +3
Query: 192 YIQYDYMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGI--KFKIVTDCQAF--EMT 359
Y Y S K S + Y+ + E LAII+S+K +R YL FKI+TD + +T
Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791
Query: 360 LRKKDLTTRVARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ R+ARW L LQ++ +E+ +R GS DALSR
Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR 831
Score = 39.9 bits (89), Expect = 2e-04
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 5 EEDTDFVFETPQQAAFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQRSTED 184
++D + + Q A + +K L S PVL+ FD L TDAS +A+ A+L Q+ +D
Sbjct: 671 KKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKH-DD 729
Query: 185 GQLHPV 202
+ +PV
Sbjct: 730 DKYYPV 735
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 63.3 bits (147), Expect = 2e-11
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +3
Query: 192 YIQYDYMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGI--KFKIVTDCQAF--EMT 359
Y Y S K S + Y+ + E LAII+S+K +R YL FKI+TD + +T
Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791
Query: 360 LRKKDLTTRVARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ R+ARW L LQ++ +E+ +R GS DALSR
Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR 831
Score = 39.9 bits (89), Expect = 2e-04
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 5 EEDTDFVFETPQQAAFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQRSTED 184
++D + + Q A + +K L S PVL+ FD L TDAS +A+ A+L Q+ +D
Sbjct: 671 KKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKH-DD 729
Query: 185 GQLHPV 202
+ +PV
Sbjct: 730 DKYYPV 735
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 63.3 bits (147), Expect = 2e-11
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +3
Query: 192 YIQYDYMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGI--KFKIVTDCQAF--EMT 359
Y Y S K S + Y+ + E LAII+S+K +R YL FKI+TD + +T
Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791
Query: 360 LRKKDLTTRVARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ R+ARW L LQ++ +E+ +R GS DALSR
Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR 831
Score = 39.9 bits (89), Expect = 2e-04
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 5 EEDTDFVFETPQQAAFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQRSTED 184
++D + + Q A + +K L S PVL+ FD L TDAS +A+ A+L Q+ +D
Sbjct: 671 KKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKH-DD 729
Query: 185 GQLHPV 202
+ +PV
Sbjct: 730 DKYYPV 735
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 63.3 bits (147), Expect = 2e-11
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Frame = +3
Query: 192 YIQYDYMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGI--KFKIVTDCQAF--EMT 359
Y Y S K S + Y+ + E LAII+S+K +R YL FKI+TD + +T
Sbjct: 732 YYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRIT 791
Query: 360 LRKKDLTTRVARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ R+ARW L LQ++ +E+ +R GS DALSR
Sbjct: 792 NESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR 831
Score = 39.9 bits (89), Expect = 2e-04
Identities = 23/66 (34%), Positives = 37/66 (56%)
Frame = +2
Query: 5 EEDTDFVFETPQQAAFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQRSTED 184
++D + + Q A + +K L S PVL+ FD L TDAS +A+ A+L Q+ +D
Sbjct: 671 KKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKH-DD 729
Query: 185 GQLHPV 202
+ +PV
Sbjct: 730 DKYYPV 735
>SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 762
Score = 30.3 bits (65), Expect = 0.20
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +2
Query: 5 EEDTDFVFE-----TPQQAAFQELKMTLASTPVLKIFDPQLYT 118
EE ++FE Q +++LK +L TP LK DP+ YT
Sbjct: 143 EEAYSYLFELMNTLNTHQGLYEKLKCSLQQTPTLKDTDPEAYT 185
>SPBC29A10.10c |||tRNA-splicing endonuclease positive effector
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1944
Score = 27.1 bits (57), Expect = 1.8
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 177 QKMVSYIQYDYMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEM 356
Q ++ ++ D + +SDT KKY S + ++ E ++KFR G K + + Q E+
Sbjct: 1392 QMELTNLKKDQEANNSSDTRKKYDSIIKKRDSLREDLEKFRS--TG-KNSSILEAQLREI 1448
Query: 357 TLRKKDL 377
T +K L
Sbjct: 1449 TKQKNML 1455
>SPBC25H2.13c |cdc20|pol2|DNA polymerase epsilon catalytic subunit a
Pol2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 2199
Score = 25.4 bits (53), Expect = 5.6
Identities = 20/84 (23%), Positives = 35/84 (41%), Gaps = 1/84 (1%)
Frame = +3
Query: 114 IQNCTQTHLCW-HWQPYYFKDPQKMVSYIQYDYMSKKTSDTEKKYTSYELEALAIIESVK 290
IQ+ T C + PY++ ++ + DY+ KK K T E L + +
Sbjct: 98 IQDDGDTFRCTIPYSPYFYIAAREGKEALVDDYLKKKFVGLIKSTTRIFKEDLQLKNHIV 157
Query: 291 KFRKYLYGIKFKIVTDCQAFEMTL 362
++K + F + D QA +L
Sbjct: 158 GYQKLYIKLVFDNLNDLQAVRKSL 181
>SPCC1682.12c |ubp16||ubiquitin C-terminal hydrolase
Ubp16|Schizosaccharomyces pombe|chr 3|||Manual
Length = 457
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 18 ILSLRHLNKQHFRS*R*RWQAHQY*KYLTHSCIQNCTQTH 137
I S+ + HFR R + AH++ +YL + ++C Q H
Sbjct: 196 IQSMLKVISSHFRPYR-QEDAHEFMRYLVDAWQKSCLQNH 234
>SPBC713.03 |||D-lactate dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 25.4 bits (53), Expect = 5.6
Identities = 14/49 (28%), Positives = 24/49 (48%)
Frame = -3
Query: 483 VICSKHPHAASVIRCGAPPHIHILAIPEPIAQHVSSDPSF*ESFRMLDN 337
VIC K P + +V G P + ++L H++ S +F ++DN
Sbjct: 267 VICPKRPSSTNVAFFGVPSYENVLKAFSETRSHLTEILS---AFELMDN 312
>SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +3
Query: 99 LTHSCIQNCTQTHLCWHWQPYYFKDPQK 182
+T I +C +TH +PY DP+K
Sbjct: 722 VTMDWINSCLKTHEIVDEEPYLLNDPEK 749
>SPAC23C11.11 |cka1|orb5|serine/threonine protein kinase
Cka1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 332
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3
Query: 162 YFKDPQKMVSYIQYDY 209
YFK P+ +V + +YDY
Sbjct: 200 YFKGPELLVDFREYDY 215
>SPCC63.10c |||dolichol kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 465
Score = 24.6 bits (51), Expect = 9.8
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = -2
Query: 337 SVTILNLIPYKYFLNFFTLSMIAKASNS*L-----VYFFSVSLVFLLM*SY 200
S +L +P LN L + AK S L +YFFS LVFL+ S+
Sbjct: 151 SGVLLISLPTLILLNLCILKLAAKLHLSALFTTCLIYFFSALLVFLVSRSW 201
>SPAC26H5.07c |||seven transmembrane receptor-like
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 505
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 433 STSYSYSCNTRAHRATRVVRSFFLRVISNA*QS 335
ST Y Y N++ + V +FFL + +A QS
Sbjct: 230 STGYFYFANSKGYTTGSKVFAFFLSLAQSARQS 262
>SPBC3H7.01 |spo14|stl1, SPBP16F5.01c|WD repeat protein
Spo14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 24.6 bits (51), Expect = 9.8
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 162 YFKDPQKMVSYIQYDYMSK 218
Y KD ++ S +++DY SK
Sbjct: 224 YIKDSKRFASLVRFDYSSK 242
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,418,927
Number of Sequences: 5004
Number of extensions: 50206
Number of successful extensions: 148
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 148
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 229961028
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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