Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_G10
(551 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 121 6e-28
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 107 7e-24
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 107 7e-24
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 103 2e-22
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 87 2e-17
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 77 2e-14
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 74 1e-13
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 67 1e-11
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 66 2e-11
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 65 5e-11
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 64 2e-10
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 64 2e-10
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 63 2e-10
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 62 4e-10
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 57 1e-08
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 57 1e-08
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 53 2e-07
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 52 4e-07
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 51 9e-07
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 51 9e-07
S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotei... 51 1e-06
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 50 2e-06
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 50 3e-06
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 50 3e-06
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 50 3e-06
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 50 3e-06
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 50 3e-06
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 50 3e-06
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 50 3e-06
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 49 5e-06
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 49 5e-06
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 42 7e-04
AF167431-1|AAF06736.1| 2173|Drosophila melanogaster sulfonyl ure... 29 5.5
AE014134-1771|AAF52866.3| 2177|Drosophila melanogaster CG5772-PA... 29 5.5
AE013599-1641|AAO41395.1| 581|Drosophila melanogaster CG33007-P... 28 9.7
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 121 bits (292), Expect = 6e-28
Identities = 58/114 (50%), Positives = 79/114 (69%), Gaps = 1/114 (0%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTTR 386
+ SK+T+D E KY S+ELE LAI+ S+++FR YL+ FKIVTDC + +TL KK+L R
Sbjct: 1042 FFSKRTTDIESKYHSFELETLAIVYSLRRFRVYLHWRTFKIVTDCNSLILTLSKKELNPR 1101
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSRSPYIGVV-TRKLHDKIKKAQEQD 545
+ARWAL Q Y++E+ HR GS+M+HVDALSR I V+ T D + Q +D
Sbjct: 1102 IARWALEFQGYDFEIVHRAGSRMQHVDALSRCTNIMVIQTNSFEDNLVICQGKD 1155
Score = 49.2 bits (112), Expect = 4e-06
Identities = 26/66 (39%), Positives = 38/66 (57%)
Frame = +2
Query: 5 EEDTDFVFETPQQAAFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQRSTED 184
++D F F + + F LK L +PVL I++ + TELH DAS A+L+Q+ ED
Sbjct: 976 KKDKPFKFGSEEMICFNMLKDKLIQSPVLAIYNHKHETELHCDASSSGFGAVLMQKK-ED 1034
Query: 185 GQLHPV 202
+ HPV
Sbjct: 1035 QKWHPV 1040
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 107 bits (258), Expect = 7e-24
Identities = 51/114 (44%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTTR 386
+ S+KT+ E SY LE A ++KKFR YL G+ FK+VTDC AF+ T +K D+
Sbjct: 813 FWSRKTTKAESNRHSYYLEVKAAYLALKKFRHYLLGVPFKLVTDCVAFKQTTKKADVPRE 872
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSRSPY-IGVVTRKLHDKIKKAQEQD 545
V W L +Q++ ++ EHR G +MRHVD LSR P ++T +L +IKK+Q+ D
Sbjct: 873 VGPWILYMQDFNFQPEHRAGERMRHVDFLSRHPQACMMITSELTARIKKSQQND 926
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +2
Query: 5 EEDTDFVFETPQQAAFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQRSTED 184
++D F +Q + +LK L + PVL+I+ + TELHTDAS L A+LLQ+ +
Sbjct: 748 KKDAIFNIGPVEQQSVNKLKEILVNEPVLRIYSREAETELHTDASKDGLGAVLLQKF--E 805
Query: 185 GQLHPV 202
G HPV
Sbjct: 806 GSFHPV 811
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
protein.
Length = 1026
Score = 107 bits (258), Expect = 7e-24
Identities = 51/114 (44%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTTR 386
+ S+KT+ E SY LE A ++KKFR YL G+ FK+VTDC AF+ T +K D+
Sbjct: 507 FWSRKTTKAESNRHSYYLEVKAAYLALKKFRHYLLGVPFKLVTDCVAFKQTTKKADVPRE 566
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSRSPY-IGVVTRKLHDKIKKAQEQD 545
V W L +Q++ ++ EHR G +MRHVD LSR P ++T +L +IKK+Q+ D
Sbjct: 567 VGPWILYMQDFNFQPEHRAGERMRHVDFLSRHPQACMMITSELTARIKKSQQND 620
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/66 (40%), Positives = 39/66 (59%)
Frame = +2
Query: 5 EEDTDFVFETPQQAAFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQRSTED 184
++D F +Q + +LK L + PVL+I+ + TELHTDAS L A+LLQ+ +
Sbjct: 442 KKDAIFNIGPVEQQSVNKLKEILVNEPVLRIYSREAETELHTDASKDGLGAVLLQKF--E 499
Query: 185 GQLHPV 202
G HPV
Sbjct: 500 GSFHPV 505
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 103 bits (246), Expect = 2e-22
Identities = 45/94 (47%), Positives = 64/94 (68%)
Frame = +3
Query: 204 DYMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTT 383
+Y SK T+ E +Y SYELE LA++++VK FR YL G +F + TDC + + + K DLT
Sbjct: 769 EYFSKTTTSVESRYHSYELETLAVVKAVKHFRHYLIGREFVVYTDCNSLKASRTKIDLTP 828
Query: 384 RVARWALVLQEYEYEVEHRTGSQMRHVDALSRSP 485
RV RW LQ + +E+++R G +M HVD LSR+P
Sbjct: 829 RVHRWWAYLQSFNFEIQYREGKRMAHVDFLSRNP 862
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = +2
Query: 71 LASTPVLKIFDPQLYTELHTDASMLALAAILLQR 172
L + P L IFDPQ ELHTDAS AILL R
Sbjct: 727 LTNEPALVIFDPQYPIELHTDASACGYGAILLHR 760
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 86.6 bits (205), Expect = 2e-17
Identities = 42/92 (45%), Positives = 59/92 (64%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTTR 386
+ S+ SDTE Y++ E E LAII +VK FR Y+YG+KF IVTD + + K+ ++
Sbjct: 645 FASRTLSDTEVNYSTIEKEMLAIIWAVKYFRPYIYGVKFTIVTDHKPLIWLMNFKEPNSK 704
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSRS 482
+ RW L L EY +E+ H+ GSQ DALSR+
Sbjct: 705 IIRWRLQLMEYNFEIIHKKGSQNVIADALSRA 736
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 76.6 bits (180), Expect = 2e-14
Identities = 38/91 (41%), Positives = 56/91 (61%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTTR 386
+ S+ S E Y++ E E LAII +V+ FR YL+G +F I+TD + + K ++
Sbjct: 532 FASRTLSAAETNYSTIEKEMLAIIWAVQYFRPYLFGRRFTIITDHKPLTWLMNFKQPNSK 591
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ RW L LQEY++EV ++ GSQ DALSR
Sbjct: 592 IVRWRLQLQEYDFEVVYKKGSQNVIADALSR 622
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 47 AFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQ 169
AF+ K L++ P+L+ D L TDAS A+ A+L Q
Sbjct: 481 AFEYCKTLLSNDPILQYPDFTKPFTLTTDASNFAIGAVLSQ 521
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 73.7 bits (173), Expect = 1e-13
Identities = 38/96 (39%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYG-IKFKIVTDCQAFEMTLRKKDLTT 383
++S+ S E+ Y + E E LAII ++KK + YLYG K KI TD Q +L +
Sbjct: 532 FLSRTLSKAEENYATNEKEMLAIIWALKKLKIYLYGKAKVKIFTDHQPLTHSLSSWNGNA 591
Query: 384 RVARWALVLQEYEYEVEHRTGSQMRHVDALSRSPYI 491
R+ RW L+EY+YE+ ++ G + DALSR P +
Sbjct: 592 RIKRWKAYLEEYDYEIFYKPGRENTVADALSRGPTV 627
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/91 (35%), Positives = 54/91 (59%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTTR 386
Y+S+ ++ E Y++ E E LAI+ + K FR YL G F+I +D Q R KD ++
Sbjct: 533 YISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPNSK 592
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ RW + L E+++++++ G + DALSR
Sbjct: 593 LTRWRVKLSEFDFDIKYIKGKENCVADALSR 623
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/42 (42%), Positives = 27/42 (64%)
Frame = +2
Query: 44 AAFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQ 169
+AF++LK ++ P+LK+ D L TDAS +AL A+L Q
Sbjct: 485 SAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQ 526
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 66.5 bits (155), Expect = 2e-11
Identities = 32/91 (35%), Positives = 52/91 (57%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTTR 386
Y+S+ +D E Y++ E E LAI+ + K FR YL G F+I +D Q + K+ +
Sbjct: 480 YISRTLNDHETNYSTIEKELLAIVWATKTFRHYLLGRHFEIASDHQPLCWLHKMKEPNAK 539
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ RW L EY++++++ G + DALSR
Sbjct: 540 LTRWKFRLAEYDFDIKYVKGKENHVADALSR 570
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +2
Query: 47 AFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQ 169
AF+ LK+ +++ P+L+ D + L TDAS +AL A+L Q
Sbjct: 433 AFKRLKLLISNDPILRSPDFKKKFVLTTDASNVALGAVLSQ 473
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 65.3 bits (152), Expect = 5e-11
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGI-KFKIVTDCQAFEMTLRKKDLTT 383
Y+S+ + TE+ Y + E E LAII S+ R YLYG K+ TD Q L ++
Sbjct: 463 YISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNA 522
Query: 384 RVARWALVLQEYEYEVEHRTGSQMRHVDALSRSP 485
++ RW ++EY E+ ++ G DALSR P
Sbjct: 523 KLKRWKARIEEYNCELIYKPGKSNVVADALSRIP 556
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 63.7 bits (148), Expect = 2e-10
Identities = 31/91 (34%), Positives = 52/91 (57%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTTR 386
++S+ +D E Y++ E E LAI+ + K FR YL G +F I +D Q K+ +
Sbjct: 532 FISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAK 591
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ RW + L EY++++++ G + DALSR
Sbjct: 592 LERWRVRLSEYQFKIDYIKGKENSVADALSR 622
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/41 (43%), Positives = 26/41 (63%)
Frame = +2
Query: 47 AFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQ 169
AF++LK + P+L++ D + L TDAS LAL A+L Q
Sbjct: 485 AFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLSQ 525
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 63.7 bits (148), Expect = 2e-10
Identities = 31/91 (34%), Positives = 52/91 (57%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTTR 386
Y S+ ++ E Y++ E E LAI+ + K FR YL+G KF+I +D + K+ +
Sbjct: 521 YASRTLNEHEVNYSAIEKELLAIVWATKYFRSYLFGRKFEIHSDHRPLVWLDSIKEPNMK 580
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ RW + L E++Y +++ G + DALSR
Sbjct: 581 LQRWKIKLNEFDYHIKYLPGKENHVADALSR 611
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 47 AFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQ 169
AF++LK+ + S P+L D + L TDAS A+ A+L Q
Sbjct: 474 AFEKLKVLITSDPILIHPDFKKSFSLTTDASNFAIGAVLSQ 514
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 63.3 bits (147), Expect = 2e-10
Identities = 29/92 (31%), Positives = 53/92 (57%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTTR 386
Y S+ ++ E Y + E E LAI+ + K FR YL+G F++++D + K+ +
Sbjct: 606 YASRTLNEHEINYATIEKELLAIVWATKYFRSYLFGRPFEVLSDHKPLVWLNNIKEPNMK 665
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSRS 482
+ RW + L E++Y++++ G + DALSR+
Sbjct: 666 LQRWKIKLNEFDYKIKYLPGKENHVADALSRT 697
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +2
Query: 47 AFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQ 169
+F++LK+ + S P+L D L TDAS +A+ A+L Q
Sbjct: 559 SFEKLKVLITSDPILIYPDFSKPFSLTTDASNVAIGAVLSQ 599
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 62.5 bits (145), Expect = 4e-10
Identities = 30/91 (32%), Positives = 53/91 (58%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTTR 386
Y+S+ ++ E Y++ E E LAI+ + K FR YL G +I +D Q + K+ ++
Sbjct: 495 YISRTLNEHEVNYSAIEKELLAIVWATKTFRHYLLGRHCEIASDHQPLCWLHKLKEPNSK 554
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ RW + L EY++++++ G + DALSR
Sbjct: 555 LTRWKIRLSEYDFDIKYIKGKENHVADALSR 585
Score = 36.3 bits (80), Expect = 0.028
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +2
Query: 47 AFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQ 169
AFQ+LK+ ++ P+LKI + + L TDAS +AL A+L Q
Sbjct: 448 AFQKLKLLISEDPILKIPNFERKFVLTTDASNVALGAVLSQ 488
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +3
Query: 210 MSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIK-FKIVTDCQAFEMTLRKKDLTTR 386
+S+ D E + + E E LAI+ ++K R YLYG+K I TD Q + ++ +
Sbjct: 526 ISRTLQDRELNFATNERELLAIVWALKSLRNYLYGVKNLNIFTDHQPLTYAVSDRNPNAK 585
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ RW + E+ ++ ++ G + DALSR
Sbjct: 586 IKRWKAFIDEHNAKIFYKPGKETYVADALSR 616
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/91 (32%), Positives = 47/91 (51%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTTR 386
Y S+ + E Y++ E E LAI S K F+ Y+YG KF I TD + K+ +
Sbjct: 458 YASRSLKNHELNYSTIEKELLAIYWSTKFFKYYIYGRKFIIKTDHRPLVWLNNLKEPNLK 517
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ RW + L E+++++ G + D LSR
Sbjct: 518 LQRWKVQLNEFDFDITFIKGKENALADGLSR 548
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 47 AFQELKMTLASTPVLKIFDPQLYTELHTDASMLALAAILLQ 169
AFQ+LK+ + S P++ D + TDAS AL A+L+Q
Sbjct: 411 AFQKLKILITSDPIVVYPDFNKQFTIVTDASNYALGAVLMQ 451
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/91 (30%), Positives = 47/91 (51%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTTR 386
Y S+ + E ++ E E AI ++ FR Y+YG F + +D + K+ +++
Sbjct: 399 YASRMFTQGESNKSTTEQELTAIHWAINHFRPYIYGKHFMVKSDHRPLSYLFSMKNPSSK 458
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ R L L+EY++ VE+ G DALSR
Sbjct: 459 LTRMRLDLEEYDFTVEYLKGKDNHIADALSR 489
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1013
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +3
Query: 210 MSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIK-FKIVTDCQAFEMTLRKKDLTTR 386
+S+ SD E Y + E E LAI+ ++ K R YLY +K I TD Q + + + +
Sbjct: 497 ISRTLSDREVNYATNERELLAIVWALAKLRHYLYAVKEINIFTDHQPLTFAVSESNPNAK 556
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ RW + E + ++ G DALSR
Sbjct: 557 IKRWKARIDESGARIFYKPGRNNLVADALSR 587
Score = 31.5 bits (68), Expect = 0.78
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 26 FETPQQAAFQELKMTLASTPV-LKIFDPQLYTELHTDASMLALAAILLQ 169
F QQ AF++L+ LAS V L+ D + +L TDAS + A+L Q
Sbjct: 441 FSEAQQRAFEKLRNILASEDVILRYPDYKKAFDLTTDASAYGIGAVLSQ 489
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 51.2 bits (117), Expect = 9e-07
Identities = 29/91 (31%), Positives = 46/91 (50%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTTR 386
Y S+ + E ++ E E AI ++ FR Y+YG F I TD + + +++
Sbjct: 233 YASRSFTKGESNKSTTEQELAAIHWAITHFRPYIYGKHFTIKTDHRPLTYLFSMTNPSSK 292
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ R L L+EY++ VE+ G DALSR
Sbjct: 293 LTRMRLELEEYDFTVEYLRGKDNFVADALSR 323
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 51.2 bits (117), Expect = 9e-07
Identities = 29/91 (31%), Positives = 46/91 (50%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTTR 386
Y S+ + E ++ E E AI ++ FR Y+YG F I TD + + +++
Sbjct: 233 YASRSFTKGESNKSTTEQELAAIHWAITHFRPYIYGKHFTIKTDHRPLTYLFSMTNPSSK 292
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ R L L+EY++ VE+ G DALSR
Sbjct: 293 LTRMRLELEEYDFTVEYLRGKDNFVADALSR 323
>S68526-1|AAD14015.2| 624|Drosophila melanogaster pol polyprotein
protein.
Length = 624
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/91 (29%), Positives = 47/91 (51%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTTR 386
Y S+ + E ++ E E AI ++ FR Y+YG F + +D + ++ +++
Sbjct: 31 YASRSFTKGESNKSTTEQELAAIHWAINHFRPYVYGRHFLVQSDHRPLSYLFSMRNPSSK 90
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ R L L+E+E+ VE+ G DALSR
Sbjct: 91 LTRMRLDLEEFEFTVEYLKGKDNHVADALSR 121
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p
protein.
Length = 825
Score = 50.4 bits (115), Expect = 2e-06
Identities = 28/91 (30%), Positives = 46/91 (50%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTTR 386
Y S+ + E ++ E E AI ++ F+ Y+YG F + TD + + +++
Sbjct: 538 YASRSFTKGESNKSTTEQELSAIHWAINHFKPYIYGRHFTVKTDHRPLTYLFSMVNPSSK 597
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ R L L+EYE+ VE+ G DALSR
Sbjct: 598 LTRMRLDLEEYEFTVEYLKGKDNYVADALSR 628
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +3
Query: 210 MSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIK-FKIVTDCQAFEMTLRKKDLTTR 386
+S+ E+ Y + E E LAI+ ++ K + +LYG + I TD Q + ++ +
Sbjct: 500 ISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAK 559
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ RW + ++ +V ++ G + DALSR
Sbjct: 560 IKRWKSYIDQHNAKVFYKPGKENFVADALSR 590
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +3
Query: 210 MSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIK-FKIVTDCQAFEMTLRKKDLTTR 386
+S+ E+ Y + E E LAI+ ++ K + +LYG + I TD Q + ++ +
Sbjct: 495 ISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAK 554
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ RW + ++ +V ++ G + DALSR
Sbjct: 555 IKRWKSYIDQHNAKVFYKPGKENFVADALSR 585
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 26 FETPQQAAFQELKMTLASTPV-LKIFDPQLYTELHTDASMLALAAILLQ 169
F Q+ AFQ L+ LAS V LK D + +L TDAS + A+L Q
Sbjct: 439 FNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQ 487
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +3
Query: 210 MSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIK-FKIVTDCQAFEMTLRKKDLTTR 386
+S+ E+ Y + E E LAI+ ++ K + +LYG + I TD Q + ++ +
Sbjct: 530 ISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAK 589
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ RW + ++ +V ++ G + DALSR
Sbjct: 590 IKRWKSYIDQHNAKVFYKPGKENFVADALSR 620
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 26 FETPQQAAFQELKMTLASTPV-LKIFDPQLYTELHTDASMLALAAILLQ 169
F Q+ AFQ L+ LAS V LK D + +L TDAS + A+L Q
Sbjct: 474 FNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQ 522
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +3
Query: 210 MSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIK-FKIVTDCQAFEMTLRKKDLTTR 386
+S+ E+ Y + E E LAI+ ++ K + +LYG + I TD Q + ++ +
Sbjct: 530 ISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAK 589
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ RW + ++ +V ++ G + DALSR
Sbjct: 590 IKRWKSYIDQHNAKVFYKPGKENFVADALSR 620
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 26 FETPQQAAFQELKMTLASTPV-LKIFDPQLYTELHTDASMLALAAILLQ 169
F Q+ AFQ L+ LAS V LK D + +L TDAS + A+L Q
Sbjct: 474 FNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQ 522
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +3
Query: 210 MSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIK-FKIVTDCQAFEMTLRKKDLTTR 386
+S+ E+ Y + E E LAI+ ++ K + +LYG + I TD Q + ++ +
Sbjct: 495 ISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAK 554
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ RW + ++ +V ++ G + DALSR
Sbjct: 555 IKRWKSYIDQHNAKVFYKPGKENFVADALSR 585
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 26 FETPQQAAFQELKMTLASTPV-LKIFDPQLYTELHTDASMLALAAILLQ 169
F Q+ AFQ L+ LAS V LK D + +L TDAS + A+L Q
Sbjct: 439 FNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQ 487
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +3
Query: 210 MSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIK-FKIVTDCQAFEMTLRKKDLTTR 386
+S+ E+ Y + E E LAI+ ++ K + +LYG + I TD Q + ++ +
Sbjct: 495 ISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAK 554
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ RW + ++ +V ++ G + DALSR
Sbjct: 555 IKRWKSYIDQHNAKVFYKPGKENFVADALSR 585
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 26 FETPQQAAFQELKMTLASTPV-LKIFDPQLYTELHTDASMLALAAILLQ 169
F Q+ AFQ L+ LAS V LK D + +L TDAS + A+L Q
Sbjct: 439 FNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQ 487
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +3
Query: 210 MSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIK-FKIVTDCQAFEMTLRKKDLTTR 386
+S+ E+ Y + E E LAI+ ++ K + +LYG + I TD Q + ++ +
Sbjct: 948 ISRTLKQPEQNYATNERELLAIVWALGKLQNFLYGSREINIFTDHQPLTFAVADRNTNAK 1007
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ RW + ++ +V ++ G + DALSR
Sbjct: 1008 IKRWKSYIDQHNAKVFYKPGKENFVADALSR 1038
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 26 FETPQQAAFQELKMTLASTPV-LKIFDPQLYTELHTDASMLALAAILLQ 169
F Q+ AFQ L+ LAS V LK D + +L TDAS + A+L Q
Sbjct: 892 FNETQRNAFQRLRNILASEDVILKYPDFKKPFDLTTDASASGIGAVLSQ 940
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 48.8 bits (111), Expect = 5e-06
Identities = 28/91 (30%), Positives = 45/91 (49%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTTR 386
Y S+ + E ++ E E AI ++ FR Y+YG F + TD + + +++
Sbjct: 644 YASRAFTKGESNKSTTEQELAAIHWAIIHFRPYIYGKHFTVKTDHRPLTYLFSMVNPSSK 703
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ R L L+EY + VE+ G DALSR
Sbjct: 704 LTRIRLELEEYNFTVEYLKGKDNHVADALSR 734
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 48.8 bits (111), Expect = 5e-06
Identities = 28/91 (30%), Positives = 45/91 (49%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYGIKFKIVTDCQAFEMTLRKKDLTTR 386
Y S+ + E ++ E E AI ++ FR Y+YG F + TD + + +++
Sbjct: 407 YASRAFTKGESNKSTTEQELAAIHWAIIHFRPYIYGKHFTVKTDHRPLTYLFSMVNPSSK 466
Query: 387 VARWALVLQEYEYEVEHRTGSQMRHVDALSR 479
+ R L L+EY + VE+ G DALSR
Sbjct: 467 LTRIRLELEEYNFTVEYLKGKDNHVADALSR 497
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 41.5 bits (93), Expect = 7e-04
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 207 YMSKKTSDTEKKYTSYELEALAIIESVKKFRKYLYG-IKFKIVTDCQAFEMTL 362
++S+ S E+ Y + E E LAII ++KK + YLYG K KI TD Q +L
Sbjct: 376 FLSRTLSKAEENYATNEKEMLAIIWALKKLKIYLYGKAKVKIFTDHQPLTHSL 428
>AF167431-1|AAF06736.1| 2173|Drosophila melanogaster sulfonyl urea
receptor protein.
Length = 2173
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -3
Query: 180 SVDL*SSMAANAN-IDASVCNSVYNCGSNIFNTGVLASVIFNS*NAAC*G 34
SV + +++A +A+ ID S C SV N SN+ SV + NA+C G
Sbjct: 1061 SVTMDANVACHADAIDGSGCISVANMQSNVVEEDDQVSVSYPIGNASCGG 1110
>AE014134-1771|AAF52866.3| 2177|Drosophila melanogaster CG5772-PA
protein.
Length = 2177
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -3
Query: 180 SVDL*SSMAANAN-IDASVCNSVYNCGSNIFNTGVLASVIFNS*NAAC*G 34
SV + +++A +A+ ID S C SV N SN+ SV + NA+C G
Sbjct: 1061 SVTMDANVACHADAIDGSGCISVANMQSNVVEEDDQVSVSYPIGNASCGG 1110
>AE013599-1641|AAO41395.1| 581|Drosophila melanogaster CG33007-PA
protein.
Length = 581
Score = 27.9 bits (59), Expect = 9.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 14 TDFVFETPQQAAFQELKMTLASTPVLKIFDPQLYTELH 127
T+FV +P++ ++L + TP K+ PQ TE H
Sbjct: 467 TNFVGSSPEELKQRQLSVGSLQTPNNKVAKPQRPTEFH 504
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,911,492
Number of Sequences: 53049
Number of extensions: 541128
Number of successful extensions: 1675
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1658
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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