Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_G10
         (551 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    23   2.1  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   2.1  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   2.1  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.3  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   8.3  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   8.3  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.3  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -1

Query: 548 SVLLLGFLYFIMEFSCDYSNI 486
           SVLL+GFL+ I+ F     NI
Sbjct: 24  SVLLVGFLFLILIFLSVAGNI 44


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 257 FITSVFLLSITRLFTHVIILDVTD 186
           FI S+FL+ I  ++++  I  VTD
Sbjct: 9   FIHSIFLILIIFIYSNETIAQVTD 32


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -1

Query: 257 FITSVFLLSITRLFTHVIILDVTD 186
           FI S+FL+ I  ++++  I  VTD
Sbjct: 9   FIHSIFLILIIFIYSNETIAQVTD 32


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 237  KKYTSYELEALA 272
            KKYT+Y ++ LA
Sbjct: 1147 KKYTNYSMQVLA 1158


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 147 HWQPYYFKDPQ 179
           HW   +FKDP+
Sbjct: 512 HWLTLHFKDPK 522


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = +3

Query: 315 IKFKIVTDC 341
           ++FK+VTDC
Sbjct: 62  VRFKLVTDC 70


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -3

Query: 111 NCGSNIFNTGV 79
           +CG N++N GV
Sbjct: 72  SCGPNVYNRGV 82


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,755
Number of Sequences: 438
Number of extensions: 3430
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)