Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_G09
(387 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein S8|Schizosaccha... 103 1e-23
SPAC521.05 |rps802|rps8-2|40S ribosomal protein S8|Schizosacchar... 102 2e-23
SPAC3F10.16c |||GTP binding protein, HSR1-related|Schizosaccharo... 29 0.19
SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces pomb... 29 0.34
SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyc... 25 3.1
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 25 4.1
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 25 5.5
SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr... 24 7.2
SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces po... 24 7.2
SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 24 7.2
SPAC18G6.06 |||U3 snoRNP-associated protein Utp11|Schizosaccharo... 24 7.2
SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces pom... 24 7.2
SPCC132.01c ||SPCC1322.17c|DUF814 family protein|Schizosaccharom... 24 7.2
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 24 7.2
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 24 7.2
SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regula... 24 9.6
SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex s... 24 9.6
SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces pomb... 24 9.6
SPBC337.04 |ppk27||serine/threonine protein kinase Ppk27 |Schizo... 24 9.6
SPBC1652.02 |aap1|SPBC16A3.20c|APC amino acid transporter|Schizo... 24 9.6
SPBC1683.11c |||isocitrate lyase|Schizosaccharomyces pombe|chr 2... 24 9.6
>SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 103 bits (247), Expect = 1e-23
Identities = 54/107 (50%), Positives = 69/107 (64%)
Frame = +2
Query: 8 AIVVVDATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVE 187
AIV +DA PFR WYE+HY + +G KG K T +S+ +K+ +R SKV+
Sbjct: 100 AIVQIDAAPFRVWYETHYGILMG-SKGKKATSTPNP-----KSKHVQRKHSARLGDSKVD 153
Query: 188 GGLEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 328
LE QF GRL A V+SRPGQ GR DGYILEG+EL FYLR++ K+
Sbjct: 154 SALETQFAAGRLYAVVSSRPGQSGRCDGYILEGEELHFYLRRMAPKK 200
>SPAC521.05 |rps802|rps8-2|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 102 bits (245), Expect = 2e-23
Identities = 54/107 (50%), Positives = 69/107 (64%)
Frame = +2
Query: 8 AIVVVDATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVE 187
AIV +DA PFR WYE+HY + +G KG K T +S+ +K+ +R SKV+
Sbjct: 100 AIVQIDAAPFRVWYETHYGILMG-SKGKKATATPTP-----KSKHVQRKHSARLGDSKVD 153
Query: 188 GGLEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKR 328
LE QF GRL A V+SRPGQ GR DGYILEG+EL FYLR++ K+
Sbjct: 154 SALETQFAAGRLYAVVSSRPGQSGRCDGYILEGEELHFYLRRMAPKK 200
>SPAC3F10.16c |||GTP binding protein,
HSR1-related|Schizosaccharomyces pombe|chr 1|||Manual
Length = 616
Score = 29.5 bits (63), Expect = 0.19
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 68 PLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGL 196
PL R+K +LT E + + S T+KK+ + + SK G+
Sbjct: 569 PLSRRKARQLTALELGVSPEALSSATSKKHNKKNKRSKQRSGV 611
>SPAC23G3.06 |||U3 snoRNP protein Nop58 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 508
Score = 28.7 bits (61), Expect = 0.34
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 14 VVVDATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSK 181
V DA ++ E ++ +KK +KL EA+ K++ +K KK+ +R S+
Sbjct: 434 VTKDAEESQEDVEMDIVIEKKKKKSSKLKEADGESSKKEKKEKKDKKHKKSKRKSE 489
>SPAC1782.01 ||SPAPYUG7.07|proteasome component|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1679
Score = 25.4 bits (53), Expect = 3.1
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -3
Query: 109 LSLSELGTFLPSEW 68
LSL+E GTFL EW
Sbjct: 1554 LSLNECGTFLQKEW 1567
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 25.0 bits (52), Expect = 4.1
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2
Query: 59 YLLPLGRKKGAKLTE 103
Y+LPLGRK K TE
Sbjct: 492 YILPLGRKTARKCTE 506
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 24.6 bits (51), Expect = 5.5
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -3
Query: 52 FIPLPERCGIHHDNSL 5
F+P PE C I+H+ +
Sbjct: 477 FLPAPEECNIYHNEHI 492
>SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1225
Score = 24.2 bits (50), Expect = 7.2
Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = +2
Query: 2 HEAIVVVDATPFRQWYESHYLLPLGRKKGA---KLTEAEEAIINKKRS 136
H V+D +Q +++Y +PL K+G ++T + + ++ KR+
Sbjct: 1116 HLGSCVIDCKLLQQQQQTNYEIPLDSKQGVLYLRITLSPKWVLRSKRA 1163
>SPCC16A11.04 |snx12||sorting nexin Snx12 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1010
Score = 24.2 bits (50), Expect = 7.2
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 62 LLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGG 193
+LPL K EAE+ ++ K T LSR+ +K + G
Sbjct: 152 VLPLITKHLRLFVEAEQLVVGNKAVSFTDHSELSREVAAKYDHG 195
>SPAC688.07c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1038
Score = 24.2 bits (50), Expect = 7.2
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 139 KDSEEVPEQAAPVQGR 186
K +EE+PE P++GR
Sbjct: 221 KKAEEIPESLPPIKGR 236
>SPAC18G6.06 |||U3 snoRNP-associated protein
Utp11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 249
Score = 24.2 bits (50), Expect = 7.2
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 119 INKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYILEGK 289
++ K +K A + L RQ+ K EE+ RLL G+ GR ++ GK
Sbjct: 188 LHSKLKEKAATELLLRQKRDKKLAAAEERVELDRLL------QGKGGRQKKKVVNGK 238
>SPAC869.02c |||nitric oxide dioxygenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 24.2 bits (50), Expect = 7.2
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 32 PFRQWYESHYLLPLGRKKGAKLTE--AEEAIINKKR-SQKTAKKYLSRQRLSKVE 187
PF+QW E L L K+ KL E +EE+ + K++ + + ++ + L K++
Sbjct: 334 PFKQWLEQ---LKLKYKENLKLKEFFSEESSVTKEQIVDEVMTRIINEEDLEKLD 385
>SPCC132.01c ||SPCC1322.17c|DUF814 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1021
Score = 24.2 bits (50), Expect = 7.2
Identities = 14/73 (19%), Positives = 33/73 (45%)
Frame = +2
Query: 26 ATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQ 205
+TP + H + KKG+K+ A++ ++R + A++ + + K +E+
Sbjct: 754 STPDTTGSDIHIVSEKRGKKGSKVITAKKVSAKERREARRARRQTALEESLKAPISIEDA 813
Query: 206 FHTGRLLACVASR 244
+LA + +
Sbjct: 814 TDPQTILAILKQK 826
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 24.2 bits (50), Expect = 7.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 92 KLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGG 193
+L E+E+ + S ++KY SRQR + G
Sbjct: 717 RLIESEDKGYRSRSSSPASRKYRSRQRYRRSYAG 750
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 24.2 bits (50), Expect = 7.2
Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -2
Query: 215 QCGIAPPD--HPLPWTGAACSGTSSLS 141
+ G A P HP PW A+ S +SS S
Sbjct: 395 ESGAASPQAGHPPPWAAASTSVSSSTS 421
>SPCC188.11 |prp45|cwf13, snw1, SPCC584.08|transcriptional regulator
Prp45|Schizosaccharomyces pombe|chr 3|||Manual
Length = 557
Score = 23.8 bits (49), Expect = 9.6
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 52 KPLPAATRKEERCQAH*G*GSHHKQK-TQSKDSE 150
KP + EER ++ G SHH + + +DSE
Sbjct: 353 KPRSTSVSSEERSRSRAGSFSHHSESENEDEDSE 386
>SPAC22F3.09c |res2|mcs1, pct1|MBF transcription factor complex
subunit Res2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 657
Score = 23.8 bits (49), Expect = 9.6
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -2
Query: 290 LYLPKCNHRRDRTDRADSPHMLTAVQCGIAPPD 192
LY+ K D +S L A+ CGI P D
Sbjct: 608 LYIRKLYEELGIDDTVNSYRRLIAMSCGINPED 640
>SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 649
Score = 23.8 bits (49), Expect = 9.6
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +2
Query: 17 VVDATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRL 175
V +AT Q+Y R G + E+ IN R + +YL RL
Sbjct: 400 VANATDVVQFYLKKKYTRSKRNDGLYTSAVEDIKINSLRVESLVNEYLKTNRL 452
>SPBC337.04 |ppk27||serine/threonine protein kinase Ppk27
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 413
Score = 23.8 bits (49), Expect = 9.6
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 251 QCGRADGYILEGKELEFYLRKIKSK 325
Q GR+ GY L E E YL I +K
Sbjct: 83 QLGRSRGYALYSDENEKYLWSINTK 107
>SPBC1652.02 |aap1|SPBC16A3.20c|APC amino acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 594
Score = 23.8 bits (49), Expect = 9.6
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -3
Query: 205 LLLQTTLYLGQALPAQVLLRCLLTAFFVYDGFLSLSELGTFLPSE 71
L + T L A P +++ ++ + + LSL E+ FLP++
Sbjct: 87 LFVSTGKSLKNAGPGSLMINFIILSAMILALILSLGEMCCFLPNQ 131
>SPBC1683.11c |||isocitrate lyase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 518
Score = 23.8 bits (49), Expect = 9.6
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +1
Query: 166 AAPVQGRGWSGGAIPHWTAVSMCGESARSVRSRRWLHFG 282
AAP+ W+ P W + E R+V R FG
Sbjct: 377 AAPLGEMTWARMDYPKWQDIKAFHEGVRAVYPDRMFAFG 415
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,625,675
Number of Sequences: 5004
Number of extensions: 31776
Number of successful extensions: 92
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 90
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 128344734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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