Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_G09
(387 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0510 - 16659486-16659564,16659772-16659947,16660464-166607... 125 1e-29
02_03_0270 + 17135464-17135467,17135583-17135655,17136253-171365... 109 6e-25
05_01_0573 - 5083030-5083151,5084639-5084738,5084790-5084829,508... 29 0.97
02_04_0094 + 19664434-19665078 29 0.97
06_03_1165 - 28106604-28106915 29 1.7
03_04_0037 + 16694760-16695227,16695563-16695642,16695735-166958... 28 2.2
01_02_0122 + 11348686-11348948,11350492-11350587,11351513-113515... 28 2.2
10_01_0049 - 668482-669283,669596-670131,670235-670452,670554-67... 28 3.0
05_07_0165 + 28107093-28108457 28 3.0
02_02_0207 - 7845072-7845102,7845235-7845341,7845444-7845521,784... 28 3.0
04_04_0466 + 25433678-25434007,25434118-25434176,25434345-254344... 27 3.9
08_01_0342 - 3016705-3016884,3016963-3017031,3017322-3017408,301... 27 5.2
05_05_0226 + 23442971-23443857,23444209-23446324 27 5.2
01_06_1416 - 37174913-37175006,37175299-37175441,37175932-371760... 27 5.2
09_02_0372 + 8070452-8071012,8071114-8071221 24 6.5
12_02_1221 - 27130321-27130491,27130616-27130664,27131120-271311... 27 6.9
10_01_0316 + 3479574-3482679,3482766-3483127 27 6.9
05_03_0652 + 16606987-16607443,16607542-16607652,16609317-16609411 27 6.9
03_05_0619 - 26180980-26181105,26181329-26181417,26181518-261816... 27 6.9
>04_03_0510 -
16659486-16659564,16659772-16659947,16660464-16660797,
16661564-16661636,16661780-16661783
Length = 221
Score = 125 bits (301), Expect = 1e-29
Identities = 61/117 (52%), Positives = 79/117 (67%), Gaps = 8/117 (6%)
Frame = +2
Query: 8 AIVVVDATPFRQWYESHYLLPLGRKKGAKLT--------EAEEAIINKKRSQKTAKKYLS 163
AIV VDA PF+QWY +HY + +GRKK A E E A K+S +K
Sbjct: 101 AIVQVDAAPFKQWYLTHYGVDIGRKKKAPAAKKDAAEGQEGEAATEEAKKSNHVVRKLEK 160
Query: 164 RQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 334
RQ+ ++ +EEQF +GRLLAC++SRPGQCGRADGYILEGKELEFY++K++ K+ K
Sbjct: 161 RQQTRTLDSHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK 217
>02_03_0270 +
17135464-17135467,17135583-17135655,17136253-17136583,
17136916-17136969,17137219-17137394,17137607-17137685
Length = 238
Score = 109 bits (263), Expect = 6e-25
Identities = 61/134 (45%), Positives = 80/134 (59%), Gaps = 25/134 (18%)
Frame = +2
Query: 8 AIVVVDATPFRQWYESHYLLPLGRKKGA-------------------------KLTEAEE 112
AIV VDA PF+QWY +HY + +GRKK A K +AE
Sbjct: 101 AIVQVDAAPFKQWYLTHYGVDIGRKKKAPAAKKDAEHALGKIRCLFIGLYVMLKGQDAEA 160
Query: 113 AIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGYILEGKE 292
K+S +K RQ+ ++ +EEQF +GRLLAC++SRPGQCGRADGYILEGKE
Sbjct: 161 TTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLLACISSRPGQCGRADGYILEGKE 220
Query: 293 LEFYLRKIKSKRAK 334
LEFY++K++ K+ K
Sbjct: 221 LEFYMKKLQRKKGK 234
>05_01_0573 -
5083030-5083151,5084639-5084738,5084790-5084829,
5085122-5085567
Length = 235
Score = 29.5 bits (63), Expect = 0.97
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 181 GRGWSGGAIPHWTAVS 228
G GW GG+ HW++VS
Sbjct: 65 GNGWQGGSTDHWSSVS 80
>02_04_0094 + 19664434-19665078
Length = 214
Score = 29.5 bits (63), Expect = 0.97
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Frame = +1
Query: 13 CRGGCHTFQAVV*KPLPAATRK---EERCQAH*G*GSHHKQKTQSKDSEEVPEQAAPVQG 183
C GG T +AVV LPAA RK E + G + + + + D+ EV E +P
Sbjct: 107 CAGGGGTAKAVVIAGLPAAARKASREHERRRRLG-RARARARVFAGDAVEVAEPGSPKV- 164
Query: 184 RGWSGGAIPHWTAVSMCGESARSVRSRRW 270
GG A C +A + RRW
Sbjct: 165 -SCLGGVRSRARAQQPCCPAAAAAGRRRW 192
>06_03_1165 - 28106604-28106915
Length = 103
Score = 28.7 bits (61), Expect = 1.7
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 145 SEEVPEQAAPVQGRGWSGGAIPHWTAVSMCGESARSVRS 261
+++V +A PV +GGA + + CG +ARS RS
Sbjct: 48 AKQVTGRAVPVSLSSQTGGAAASSSPAAACGRAARSKRS 86
>03_04_0037 +
16694760-16695227,16695563-16695642,16695735-16695828,
16695973-16696071,16696650-16696742,16696822-16696941,
16697422-16697525,16697734-16697806,16698023-16698085
Length = 397
Score = 28.3 bits (60), Expect = 2.2
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 206 FHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 334
F+ +LA AS P +C R + + G + LRK S R K
Sbjct: 104 FYLRYILAAAASGPCRCRRKESLVGMGNYISRVLRKSSSDRGK 146
>01_02_0122 +
11348686-11348948,11350492-11350587,11351513-11351524,
11354009-11354699
Length = 353
Score = 28.3 bits (60), Expect = 2.2
Identities = 20/72 (27%), Positives = 29/72 (40%)
Frame = +1
Query: 121 KQKTQSKDSEEVPEQAAPVQGRGWSGGAIPHWTAVSMCGESARSVRSRRWLHFGR*RAGV 300
K +T+ KD PE A G G GG I + +A S ++ S L G
Sbjct: 192 KTRTKEKDKAPAPEAAHNDDGGGGGGGGIDNVSAASHSHREEQAQASASGLTSDGLEEGP 251
Query: 301 LPKEDQIQEGKV 336
L +++ G V
Sbjct: 252 LGLSEEMVSGPV 263
>10_01_0049 -
668482-669283,669596-670131,670235-670452,670554-670653,
670706-670855
Length = 601
Score = 27.9 bits (59), Expect = 3.0
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +2
Query: 182 VEGGLEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSK 325
V+G + HTG+ AC + G+ A Y G L YL K++ +
Sbjct: 63 VKGNPASKTHTGKWKACYSILGGEFCGALAYYAVGTNLVSYLTKVQGQ 110
>05_07_0165 + 28107093-28108457
Length = 454
Score = 27.9 bits (59), Expect = 3.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 212 CGIAPPDHPLPWTGAACS 159
C +PPD+ LPW AA S
Sbjct: 248 CTYSPPDYGLPWADAAVS 265
>02_02_0207 -
7845072-7845102,7845235-7845341,7845444-7845521,
7845966-7846169,7846389-7846445,7846513-7846578,
7847976-7848020,7848129-7848170,7848563-7848649,
7848830-7848919,7849226-7849431,7849565-7849604
Length = 350
Score = 27.9 bits (59), Expect = 3.0
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +1
Query: 145 SEEVPEQAAPVQGRGWSGGAIPHWTAVSMCGESARSVRSRRW 270
S+EV AA + GW G + HW +R RRW
Sbjct: 16 SDEVAAPAALPRRGGWEGHSEDHWQPCRGIQWVRERLRGRRW 57
>04_04_0466 +
25433678-25434007,25434118-25434176,25434345-25434426,
25435024-25435122,25435750-25435831,25436759-25436823,
25437241-25438308,25438369-25438446,25438550-25438596,
25438734-25438779,25438871-25438950,25439050-25439166,
25439842-25439923,25440156-25440281,25440415-25440489,
25440743-25440868,25441542-25441646
Length = 888
Score = 27.5 bits (58), Expect = 3.9
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 157 PEQAAPVQGRGWSGGAIPHWTAVSMCGESARSVRSRRW 270
P AA V GRG S + + A + AR R RRW
Sbjct: 18 PLAAASVSGRGRSPSSASSYRAAARWWPGARRGRRRRW 55
>08_01_0342 -
3016705-3016884,3016963-3017031,3017322-3017408,
3017603-3017650,3017783-3017873,3018243-3018322,
3018429-3018533,3019457-3019551,3019710-3019788,
3020214-3020402
Length = 340
Score = 27.1 bits (57), Expect = 5.2
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Frame = -3
Query: 160 QVLLRC----LLTAFFVYDGFLSLSELGTFLPSEWQQVVAFIPL 41
Q+LL C LL F Y GFL L T + EWQ VV + L
Sbjct: 246 QLLLLCPVLFLLQGFEGYVGFLLLRTAHTGIVPEWQVVVCGVLL 289
>05_05_0226 + 23442971-23443857,23444209-23446324
Length = 1000
Score = 27.1 bits (57), Expect = 5.2
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +2
Query: 110 EAIINKKRSQK-TAKKYLSRQRLSKVEGGLEEQFHTGRLLACVAS 241
E ++NK SQ AK RL FH+G L CVAS
Sbjct: 521 EFLLNKSLSQIFIAKSSRDHPRLGVNTNACHLSFHSGELTECVAS 565
>01_06_1416 -
37174913-37175006,37175299-37175441,37175932-37176027,
37177125-37177364,37177456-37177812,37178020-37178097,
37178387-37178434,37179406-37179675,37179954-37180054,
37180452-37180605
Length = 526
Score = 27.1 bits (57), Expect = 5.2
Identities = 18/60 (30%), Positives = 27/60 (45%)
Frame = -3
Query: 250 TGPTRHTC*QPSSVELLLQTTLYLGQALPAQVLLRCLLTAFFVYDGFLSLSELGTFLPSE 71
+G R+TC + + L QT L + L + RC L+ Y +LS L + P E
Sbjct: 437 SGCVRYTCMRKKADNLRQQTLHQLRRILTTRQAARCFLSIGEYYRRLRALSNLWSSRPRE 496
>09_02_0372 + 8070452-8071012,8071114-8071221
Length = 222
Score = 23.8 bits (49), Expect(2) = 6.5
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 185 EGGLEEQFHTGRLLACVASRP 247
E L+E+ H+G LL+CV P
Sbjct: 130 EEPLQEEKHSGHLLSCVELFP 150
Score = 21.4 bits (43), Expect(2) = 6.5
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 95 LTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQ 205
L E EE +++K ++LSR L + +EEQ
Sbjct: 71 LMEEEEIDEESLQAEKHPSRHLSRVDLFPLAAPMEEQ 107
>12_02_1221 -
27130321-27130491,27130616-27130664,27131120-27131188,
27131845-27131939,27132032-27132121,27132885-27132968,
27133122-27133211,27133310-27133624,27134184-27134399,
27134736-27134774,27135337-27135408
Length = 429
Score = 26.6 bits (56), Expect = 6.9
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +2
Query: 65 LPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVAS 241
L +K+ A+ + A INKK ++Y+S ++ G +Q++ G + C S
Sbjct: 337 LEKAKKELAESIQKGVAFINKKSYIVKRREYISSNQVGCCFHGRRKQYYLGSKVTCFGS 395
>10_01_0316 + 3479574-3482679,3482766-3483127
Length = 1155
Score = 26.6 bits (56), Expect = 6.9
Identities = 20/79 (25%), Positives = 36/79 (45%)
Frame = -3
Query: 280 QNVTIGATALTGPTRHTC*QPSSVELLLQTTLYLGQALPAQVLLRCLLTAFFVYDGFLSL 101
Q + I L+GP H+ +E+L + L +P+Q L +++ V +S
Sbjct: 701 QGLNISNNRLSGPIPHSLGNLQKLEVLDLSNNSLSGPIPSQ--LSNMISLSVVN---ISF 755
Query: 100 SELGTFLPSEWQQVVAFIP 44
+EL LP W ++ +P
Sbjct: 756 NELSGQLPDGWDKIATRLP 774
>05_03_0652 + 16606987-16607443,16607542-16607652,16609317-16609411
Length = 220
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -3
Query: 139 LTAFFVYDGFLSLSELGTFLP 77
L+ FFV+DGFL++ + F P
Sbjct: 200 LSCFFVFDGFLTVKKYHIFSP 220
>03_05_0619 -
26180980-26181105,26181329-26181417,26181518-26181629,
26181711-26181848,26182004-26182150,26182458-26182532,
26182627-26182668,26183033-26183152,26183806-26183880,
26184051-26184113,26184690-26184759,26184877-26185006,
26185097-26185328
Length = 472
Score = 26.6 bits (56), Expect = 6.9
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 109 GSHHKQKTQSKDSEEVPEQAAPVQGRGWS 195
G H K++ +++D EE E+ APV + S
Sbjct: 437 GGHKKKRRKNEDDEEEEERNAPVSRKSKS 465
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,921,090
Number of Sequences: 37544
Number of extensions: 266270
Number of successful extensions: 910
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 648814968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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