Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_G09
         (387 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X67247-1|CAA47670.1|  208|Homo sapiens ribosomal protein S8 prot...   174   9e-44
BC070875-1|AAH70875.1|  208|Homo sapiens ribosomal protein S8 pr...   174   9e-44
AL592166-8|CAI13002.1|  188|Homo sapiens ribosomal protein S8 pr...   174   9e-44
AL592166-7|CAI13003.1|  208|Homo sapiens ribosomal protein S8 pr...   174   9e-44
AB062401-1|BAB93488.1|  208|Homo sapiens ribosomal protein S8 pr...   174   9e-44
BC005678-1|AAH05678.1|   80|Homo sapiens Similar to ribosomal pr...   119   3e-27
BC004102-1|AAH04102.1|  512|Homo sapiens ALDH3A1 protein protein.      29   6.9  
M59834-1|AAA63267.1|   61|Homo sapiens protein vav protein.            28   9.1  
AF030227-1|AAC25011.1|  845|Homo sapiens vav protein protein.          28   9.1  

>X67247-1|CAA47670.1|  208|Homo sapiens ribosomal protein S8
           protein.
          Length = 208

 Score =  174 bits (423), Expect = 9e-44
 Identities = 77/108 (71%), Positives = 93/108 (86%)
 Frame = +2

Query: 11  IVVVDATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEG 190
           IV++D+TP+RQWYESHY LPLGRKKGAKLT  EE I+NKKRS+K  KKY  R++ +K+  
Sbjct: 101 IVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISS 160

Query: 191 GLEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 334
            LEEQF  G+LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 161 LLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208


>BC070875-1|AAH70875.1|  208|Homo sapiens ribosomal protein S8
           protein.
          Length = 208

 Score =  174 bits (423), Expect = 9e-44
 Identities = 77/108 (71%), Positives = 93/108 (86%)
 Frame = +2

Query: 11  IVVVDATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEG 190
           IV++D+TP+RQWYESHY LPLGRKKGAKLT  EE I+NKKRS+K  KKY  R++ +K+  
Sbjct: 101 IVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISS 160

Query: 191 GLEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 334
            LEEQF  G+LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 161 LLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208


>AL592166-8|CAI13002.1|  188|Homo sapiens ribosomal protein S8
           protein.
          Length = 188

 Score =  174 bits (423), Expect = 9e-44
 Identities = 77/108 (71%), Positives = 93/108 (86%)
 Frame = +2

Query: 11  IVVVDATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEG 190
           IV++D+TP+RQWYESHY LPLGRKKGAKLT  EE I+NKKRS+K  KKY  R++ +K+  
Sbjct: 81  IVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISS 140

Query: 191 GLEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 334
            LEEQF  G+LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 141 LLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 188


>AL592166-7|CAI13003.1|  208|Homo sapiens ribosomal protein S8
           protein.
          Length = 208

 Score =  174 bits (423), Expect = 9e-44
 Identities = 77/108 (71%), Positives = 93/108 (86%)
 Frame = +2

Query: 11  IVVVDATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEG 190
           IV++D+TP+RQWYESHY LPLGRKKGAKLT  EE I+NKKRS+K  KKY  R++ +K+  
Sbjct: 101 IVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISS 160

Query: 191 GLEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 334
            LEEQF  G+LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 161 LLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208


>AB062401-1|BAB93488.1|  208|Homo sapiens ribosomal protein S8
           protein.
          Length = 208

 Score =  174 bits (423), Expect = 9e-44
 Identities = 77/108 (71%), Positives = 93/108 (86%)
 Frame = +2

Query: 11  IVVVDATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEG 190
           IV++D+TP+RQWYESHY LPLGRKKGAKLT  EE I+NKKRS+K  KKY  R++ +K+  
Sbjct: 101 IVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISS 160

Query: 191 GLEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 334
            LEEQF  G+LLAC+ASRPGQCGRADGY+LEGKELEFYLRKIK+++ K
Sbjct: 161 LLEEQFQQGKLLACIASRPGQCGRADGYVLEGKELEFYLRKIKARKGK 208


>BC005678-1|AAH05678.1|   80|Homo sapiens Similar to ribosomal
           protein S8 protein.
          Length = 80

 Score =  119 bits (287), Expect = 3e-27
 Identities = 54/80 (67%), Positives = 66/80 (82%)
 Frame = +2

Query: 95  LTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCGRADGY 274
           LT  EE I+NKKRS+K  KKY  R++ +K+   LEEQF  G+LLAC+ASRPGQCGRADGY
Sbjct: 1   LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGY 60

Query: 275 ILEGKELEFYLRKIKSKRAK 334
           +LEGKELEFYLRKIK+++ K
Sbjct: 61  VLEGKELEFYLRKIKARKGK 80


>BC004102-1|AAH04102.1|  512|Homo sapiens ALDH3A1 protein protein.
          Length = 512

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 246 GRLATHANSRPVWNCSSRPPSTLDRRCLLRY 154
           GR A   N+ P+ +C SR PS  +R C  R+
Sbjct: 30  GREAGSLNTSPLGSCRSRSPSYRERLCQRRH 60


>M59834-1|AAA63267.1|   61|Homo sapiens protein vav protein.
          Length = 61

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = -2

Query: 218 VQCGIAPPDHPLPWTGA-ACSGTSSLSFDCVFC 123
           +QC + PP H + W GA  C    +L    + C
Sbjct: 12  IQCRVLPPSHRVTWDGAQVCELAQALRDGVLLC 44


>AF030227-1|AAC25011.1|  845|Homo sapiens vav protein protein.
          Length = 845

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
 Frame = -2

Query: 218 VQCGIAPPDHPLPWTGA-ACSGTSSLSFDCVFC 123
           +QC + PP H + W GA  C    +L    + C
Sbjct: 12  IQCRVLPPSHRVTWDGAQVCELAQALRDGVLLC 44


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,044,393
Number of Sequences: 237096
Number of extensions: 1425064
Number of successful extensions: 3671
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3671
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2641190740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)