Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_G09
(387 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal prote... 156 6e-39
Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical pr... 31 0.37
U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein. 31 0.37
Z81513-2|CAB04186.2| 489|Caenorhabditis elegans Hypothetical pr... 28 2.0
U88315-4|AAB42369.3| 778|Caenorhabditis elegans Hypothetical pr... 28 2.0
AF515833-1|AAM55225.1| 489|Caenorhabditis elegans synaptonemal ... 28 2.0
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 28 2.0
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 28 2.6
Z70307-12|CAA94340.1| 405|Caenorhabditis elegans Hypothetical p... 28 2.6
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 28 2.6
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 27 4.6
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 27 4.6
U20864-8|AAC46665.2| 330|Caenorhabditis elegans Peroxisome asse... 27 4.6
Z29115-3|CAA82361.1| 347|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 26 8.1
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 26 8.1
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 26 8.1
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 26 8.1
U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical pr... 26 8.1
U00046-2|AAN65304.1| 860|Caenorhabditis elegans Temporarily ass... 26 8.1
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass... 26 8.1
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 26 8.1
AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical ... 26 8.1
AC024751-6|AAK21506.1| 270|Caenorhabditis elegans Hypothetical ... 26 8.1
AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical... 26 8.1
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein. 26 8.1
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein. 26 8.1
>U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 8 protein.
Length = 208
Score = 156 bits (378), Expect = 6e-39
Identities = 72/109 (66%), Positives = 89/109 (81%)
Frame = +2
Query: 8 AIVVVDATPFRQWYESHYLLPLGRKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVE 187
AI+ VDA PFRQWYE+HY LPL RKK AKL+E + AI+NKKRS T KKY RQ+ + V+
Sbjct: 100 AIISVDAAPFRQWYEAHYALPLARKKNAKLSEEDNAILNKKRSHHTMKKYTERQKTAAVD 159
Query: 188 GGLEEQFHTGRLLACVASRPGQCGRADGYILEGKELEFYLRKIKSKRAK 334
L EQF+TGRLLA ++S PGQ G+A+GYILEGKEL+FYLRKI++K+AK
Sbjct: 160 ALLIEQFNTGRLLARISSSPGQVGQANGYILEGKELDFYLRKIRAKKAK 208
>Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical
protein E02H4.1 protein.
Length = 664
Score = 30.7 bits (66), Expect = 0.37
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 215 QCGIAPPDHPLPWTGAA-CSGTSSLSFDCV 129
+CG A P +P PW +A C T++ + +C+
Sbjct: 486 KCGCADPRYPKPWKRSAWCDSTNTTTLNCL 515
>U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein.
Length = 664
Score = 30.7 bits (66), Expect = 0.37
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -2
Query: 215 QCGIAPPDHPLPWTGAA-CSGTSSLSFDCV 129
+CG A P +P PW +A C T++ + +C+
Sbjct: 486 KCGCADPRYPKPWKRSAWCDSTNTTTLNCL 515
>Z81513-2|CAB04186.2| 489|Caenorhabditis elegans Hypothetical
protein F26D2.2 protein.
Length = 489
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 92 KLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRL 223
K+T ++AI ++ + KK L + + SK E LEE+ +L
Sbjct: 331 KITSLKKAIAKEQEKLEKGKKELEQLQSSKTESDLEEEISAMQL 374
>U88315-4|AAB42369.3| 778|Caenorhabditis elegans Hypothetical
protein C37H5.5 protein.
Length = 778
Score = 28.3 bits (60), Expect = 2.0
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +2
Query: 77 RKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEE 202
+K G A++ I K+++ KTAKKY +++L+++E L E
Sbjct: 424 KKSGKDALIAKKYQIKKEKASKTAKKY--KKQLARLEADLLE 463
>AF515833-1|AAM55225.1| 489|Caenorhabditis elegans synaptonemal
complex protein SYP-1 protein.
Length = 489
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 92 KLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRL 223
K+T ++AI ++ + KK L + + SK E LEE+ +L
Sbjct: 331 KITSLKKAIAKEQEKLEKGKKELEQLQSSKTESDLEEEISAMQL 374
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Frame = -3
Query: 349 ILHISLCPLGFDLP*VEL--QLFTFQNVTI 266
I +SLCPLG+DL V L LF FQ +I
Sbjct: 12 ISSVSLCPLGYDLLYVHLLTTLFHFQATSI 41
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 293 ALYLPKCNHRRDRTDRADSPHMLTAVQCGIAPPDHPLP 180
+L + + H D TDR TA+ G+ PDH P
Sbjct: 164 SLGVEEFKHHPDPTDRVTGAWQGTAIAAGVTIPDHIQP 201
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 293 ALYLPKCNHRRDRTDRADSPHMLTAVQCGIAPPDHPLP 180
+L + + H D TDR TA+ G+ PDH P
Sbjct: 166 SLGVEEFKHHPDPTDRVTGAWQGTAIAAGVTIPDHIQP 203
>Z70307-12|CAA94340.1| 405|Caenorhabditis elegans Hypothetical
protein C39E9.11 protein.
Length = 405
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 80 KKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEE 202
KK K + EE +K+ +K AKK + +++ K+ GG+++
Sbjct: 79 KKALKKAQKEE----RKKEKKLAKKAMKVEKIPKIGGGIQK 115
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -2
Query: 293 ALYLPKCNHRRDRTDRADSPHMLTAVQCGIAPPDHPLP 180
+L + + H D TDR TA+ G+ PDH P
Sbjct: 166 SLGVEEFKHHPDPTDRVTGAWQGTAIAAGVTIPDHIQP 203
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 27.1 bits (57), Expect = 4.6
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 15 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS*TKNAVKRQRRST*AG 167
S + PHLS S K T HS+ + PSS +KPS + + R R + G
Sbjct: 763 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPSYSGSYSARSRGGSSTG 810
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 27.1 bits (57), Expect = 4.6
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 15 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS*TKNAVKRQRRST*AG 167
S + PHLS S K T HS+ + PSS +KPS + + R R + G
Sbjct: 763 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPSYSGSYSARSRGGSSTG 810
>U20864-8|AAC46665.2| 330|Caenorhabditis elegans Peroxisome
assembly factor protein13 protein.
Length = 330
Score = 27.1 bits (57), Expect = 4.6
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +1
Query: 169 APVQGRGWSGGAIPHWTAVSMCGESARSVRSRRWLHFGR*RAGVLPKEDQ 318
A + R W+ GA PH+TA ++ A + + +++ R V PKE+Q
Sbjct: 223 AAEEKRKWATGAAPHYTAQALFDFQASNEQELSFMNGETLR--VAPKEEQ 270
>Z29115-3|CAA82361.1| 347|Caenorhabditis elegans Hypothetical
protein T26G10.4 protein.
Length = 347
Score = 26.6 bits (56), Expect = 6.1
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +2
Query: 80 KKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGRLLACVASRPGQCG 259
KK A L +A E N+K + K + R +V L+ +FHT +L+ SR Q
Sbjct: 257 KKLAVLVQATEDS-NEKLFTEDGVKKMQRAMNEQVSRALKHRFHTTKLVKSEISRVVQMH 315
Query: 260 RADG-YILEGKELEFYLRKIKSK 325
A ++ G L + K
Sbjct: 316 PASNKFVARGGNLSLACHRFVHK 338
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 15 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS 119
S + PHLS S K T HS+ + PSS +KPS
Sbjct: 763 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPS 794
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 15 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS 119
S + PHLS S K T HS+ + PSS +KPS
Sbjct: 629 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPS 660
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 15 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS 119
S + PHLS S K T HS+ + PSS +KPS
Sbjct: 763 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPS 794
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 15 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS 119
S + PHLS S K T HS+ + PSS +KPS
Sbjct: 763 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPS 794
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 15 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS 119
S + PHLS S K T HS+ + PSS +KPS
Sbjct: 629 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPS 660
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 15 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS 119
S + PHLS S K T HS+ + PSS +KPS
Sbjct: 763 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPS 794
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical
protein F45E10.1e protein.
Length = 1234
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 15 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS 119
S + PHLS S K T HS+ + PSS +KPS
Sbjct: 343 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPS 374
>U58746-8|AAB00629.1| 339|Caenorhabditis elegans Hypothetical
protein R05G6.2 protein.
Length = 339
Score = 26.2 bits (55), Expect = 8.1
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = -3
Query: 286 TFQNVT-IGATALTGPTRHTC*QPSSVELLLQTTLYL-GQALPAQVLLRCLLTAFFVYDG 113
TFQ + +G T L P P+ L L + Y+ + + L+ L+ FF
Sbjct: 252 TFQKLQDLGWTVLPHPPYSPDLAPTDYHLFLSLSDYMRDKQFDDEEHLKTELSTFFSSRS 311
Query: 112 FLSLSELGTFLPSEWQQVV 56
S LPS+WQQVV
Sbjct: 312 PDFFSRGIMMLPSKWQQVV 330
>U00046-2|AAN65304.1| 860|Caenorhabditis elegans Temporarily
assigned gene nameprotein 152, isoform c protein.
Length = 860
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 53 SHYLLPLGRKKGAKLTEAEEAIINKKRS-QKTAKKYLSRQRLSKVEGGLEEQF 208
SH LP+G G +++E +I+N R +++Y+S + V L E+F
Sbjct: 560 SHPFLPIGYLGGIEISEISVSILNNGRPLDLYSERYMSISPEAVVRLELNEKF 612
>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily assigned
gene nameprotein 152, isoform a protein.
Length = 2560
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 53 SHYLLPLGRKKGAKLTEAEEAIINKKRS-QKTAKKYLSRQRLSKVEGGLEEQF 208
SH LP+G G +++E +I+N R +++Y+S + V L E+F
Sbjct: 2231 SHPFLPIGYLGGIEISEISVSILNNGRPLDLYSERYMSISPEAVVRLELNEKF 2283
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +3
Query: 15 SWWMPHLSGSGMKATTCCHSEGRKVPSSLRLRKPS 119
S + PHLS S K T HS+ + PSS +KPS
Sbjct: 763 SSYSPHLSVSADKDTMSMHSQTSRRPSS---QKPS 794
>AC024800-4|AAF60722.1| 514|Caenorhabditis elegans Hypothetical
protein Y49F6A.4 protein.
Length = 514
Score = 26.2 bits (55), Expect = 8.1
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = -3
Query: 286 TFQNVT-IGATALTGPTRHTC*QPSSVELLLQTTLYL-GQALPAQVLLRCLLTAFFVYDG 113
TFQ + +G T L P P+ L L + Y+ + + L+ L+ FF
Sbjct: 227 TFQKLQDLGWTVLPHPPYSPDLAPTDYHLFLSLSDYMRDKQFDDEEHLKTELSTFFSSRS 286
Query: 112 FLSLSELGTFLPSEWQQVV 56
S LPS+WQQVV
Sbjct: 287 PDFFSRGIMMLPSKWQQVV 305
>AC024751-6|AAK21506.1| 270|Caenorhabditis elegans Hypothetical
protein Y18H1A.2 protein.
Length = 270
Score = 26.2 bits (55), Expect = 8.1
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +2
Query: 77 RKKGAKLTEAEEAIINKKRSQKTAKKYLSRQRLSKVEGGLEEQFHTGR 220
RK+ + +++EE + + K KK R R S E LEE++ R
Sbjct: 159 RKRKREDSDSEEKAKKRHKKDKKKKKKKHRHRDSSEERQLEEEYDRER 206
>AC006769-12|AAF60591.1| 384|Caenorhabditis elegans Hypothetical
protein Y45G12C.13 protein.
Length = 384
Score = 26.2 bits (55), Expect = 8.1
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 2/79 (2%)
Frame = -3
Query: 286 TFQNVT-IGATALTGPTRHTC*QPSSVELLLQTTLYL-GQALPAQVLLRCLLTAFFVYDG 113
TFQ + +G T L P P+ L L + Y+ + + L+ L+ FF
Sbjct: 252 TFQKLQDLGWTVLPHPPYSPDLAPTDYHLFLSLSDYMRDKQFDDEEHLKTELSTFFSSRS 311
Query: 112 FLSLSELGTFLPSEWQQVV 56
S LPS+WQQVV
Sbjct: 312 PDFFSRGIMMLPSKWQQVV 330
>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
Length = 2502
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 53 SHYLLPLGRKKGAKLTEAEEAIINKKRS-QKTAKKYLSRQRLSKVEGGLEEQF 208
SH LP+G G +++E +I+N R +++Y+S + V L E+F
Sbjct: 2173 SHPFLPIGYLGGIEISEISVSILNNGRPLDLYSERYMSISPEAVVRLELNEKF 2225
>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
Length = 2684
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 53 SHYLLPLGRKKGAKLTEAEEAIINKKRS-QKTAKKYLSRQRLSKVEGGLEEQF 208
SH LP+G G +++E +I+N R +++Y+S + V L E+F
Sbjct: 2355 SHPFLPIGYLGGIEISEISVSILNNGRPLDLYSERYMSISPEAVVRLELNEKF 2407
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,213,150
Number of Sequences: 27780
Number of extensions: 188841
Number of successful extensions: 561
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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