Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_G08
         (483 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative transcri...    23   4.2  
DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     23   5.5  
AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.          23   7.3  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            22   9.6  
AY331408-1|AAQ97589.1|  100|Anopheles gambiae agCP14332 protein.       22   9.6  

>AJ439060-13|CAD27764.1|  319|Anopheles gambiae putative
           transcription factor protein.
          Length = 319

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 72  ENRRLSQLDQMQLRAPEQLSGQK-PALLAKPSNIPVKAADKQQQKALGVSSK 224
           +NRR     Q +    EQ S  +  + + K  NIPV A +K +Q   G+ +K
Sbjct: 236 KNRRAKWRKQKR-EEQEQFSNYEINSKIRKLINIPVSAQEKLRQLQTGIFAK 286


>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
 Frame = +1

Query: 1   ARGLNSEQPLMNLPKER**LA--RIWKTEDFRN---SIRCS*ERRNSCLGKNPLYWQNRV 165
           +RG+  +QP +    E    +  R + +E + N   S+        SC   NPL W   V
Sbjct: 209 SRGVTGDQPSLQSSYESYNSSGLRSYSSETYPNPGSSLSVGVSGVGSCTPSNPLEWTGNV 268

Query: 166 TYLSK 180
           T   K
Sbjct: 269 TVRKK 273


>AY846632-1|AAW31598.1|  412|Anopheles gambiae SAGLIN protein.
          Length = 412

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -2

Query: 128 QLFRRSQLHLIELRKSSVFQIRASHYRSFGRFI 30
           +L  R   H  +L+ +S+  I   H+R F RF+
Sbjct: 291 ELAARQPQHFRQLQ-TSLATIELKHWRKFDRFV 322


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +3

Query: 174  VKAADKQQQKALGVSSKIPIFNTQKSLSQE 263
            VKA DK   K + +++   +F+T  + S+E
Sbjct: 1108 VKAHDKDTFKIVSIATGETLFDTNTTKSEE 1137


>AY331408-1|AAQ97589.1|  100|Anopheles gambiae agCP14332 protein.
          Length = 100

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +2

Query: 71  GKPKTFATRSDAAESAGTVVWAK 139
           G P + A   D  E+A +V+W K
Sbjct: 66  GSPVSRAQTDDDDEAAASVMWCK 88


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,810
Number of Sequences: 2352
Number of extensions: 8109
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)