Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_G08
(483 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D50370-1|BAA08904.1| 506|Homo sapiens nucleosome assembly prote... 32 0.92
BC034954-1|AAH34954.1| 506|Homo sapiens nucleosome assembly pro... 32 0.92
AL009173-1|CAA15661.1| 506|Homo sapiens nucleosome assembly pro... 32 0.92
AK223621-1|BAD97341.1| 506|Homo sapiens nucleosome assembly pro... 32 0.92
X65964-1|CAA46780.1| 1618|Homo sapiens nestin protein. 31 2.8
AL590666-3|CAI16338.1| 1621|Homo sapiens nestin protein. 31 2.8
AB073350-1|BAE45713.1| 1018|Homo sapiens nestin protein. 31 2.8
AY700780-1|AAU10087.1| 268|Homo sapiens KIAA0515 protein protein. 30 4.9
BC012289-1|AAH12289.1| 326|Homo sapiens KIAA0515 protein protein. 29 6.5
AL358781-5|CAI40218.1| 177|Homo sapiens KIAA0515 protein. 29 6.5
AL358781-1|CAI40214.1| 1535|Homo sapiens KIAA0515 protein. 29 6.5
AB011087-1|BAA25441.1| 670|Homo sapiens KIAA0515 protein protein. 29 6.5
>D50370-1|BAA08904.1| 506|Homo sapiens nucleosome assembly protein
protein.
Length = 506
Score = 32.3 bits (70), Expect = 0.92
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 141 PALLAKPSNIP-VKAADKQQQKALGVSSKIPIFNTQKSLSQENLTDT 278
P + P +P VKA DK+Q KA ++ + T K + +E L D+
Sbjct: 246 PEVKEDPKEVPQVKADDKEQPKATEAKARAAVRETHKRVPEERLRDS 292
>BC034954-1|AAH34954.1| 506|Homo sapiens nucleosome assembly
protein 1-like 3 protein.
Length = 506
Score = 32.3 bits (70), Expect = 0.92
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 141 PALLAKPSNIP-VKAADKQQQKALGVSSKIPIFNTQKSLSQENLTDT 278
P + P +P VKA DK+Q KA ++ + T K + +E L D+
Sbjct: 246 PEVKEDPKEVPQVKADDKEQPKATEAKARAAVRETHKRVPEERLQDS 292
>AL009173-1|CAA15661.1| 506|Homo sapiens nucleosome assembly
protein 1-like 3 protein.
Length = 506
Score = 32.3 bits (70), Expect = 0.92
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 141 PALLAKPSNIP-VKAADKQQQKALGVSSKIPIFNTQKSLSQENLTDT 278
P + P +P VKA DK+Q KA ++ + T K + +E L D+
Sbjct: 246 PEVKEDPKEVPQVKADDKEQPKATEAKARAAVRETHKRVPEERLQDS 292
>AK223621-1|BAD97341.1| 506|Homo sapiens nucleosome assembly
protein 1-like 3 variant protein.
Length = 506
Score = 32.3 bits (70), Expect = 0.92
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +3
Query: 141 PALLAKPSNIP-VKAADKQQQKALGVSSKIPIFNTQKSLSQENLTDT 278
P + P +P VKA DK+Q KA ++ + T K + +E L D+
Sbjct: 246 PEVKEDPKEVPQVKADDKEQPKATEAKARAAVRETHKRVPEERLQDS 292
>X65964-1|CAA46780.1| 1618|Homo sapiens nestin protein.
Length = 1618
Score = 30.7 bits (66), Expect = 2.8
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Frame = +3
Query: 48 TIVTSTDLENRRLSQLDQMQLRAPEQLSGQKPALLAKPSNIPVKAADKQQQKALGVSS-- 221
T+ T R L + DQM LR PE++ + L + P++ +++ K+L S
Sbjct: 756 TLEKETQQRRRSLGEQDQMTLRPPEKVDLEPLKSLDQEIARPLENENQEFLKSLKEESVE 815
Query: 222 -----KIPIFNTQKSLSQENLTDTKFTLSRSP 302
+ I + KS QENL K +++P
Sbjct: 816 AVKSLETEILESLKSAGQENLETLKSPETQAP 847
>AL590666-3|CAI16338.1| 1621|Homo sapiens nestin protein.
Length = 1621
Score = 30.7 bits (66), Expect = 2.8
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Frame = +3
Query: 48 TIVTSTDLENRRLSQLDQMQLRAPEQLSGQKPALLAKPSNIPVKAADKQQQKALGVSS-- 221
T+ T R L + DQM LR PE++ + L + P++ +++ K+L S
Sbjct: 757 TLEKETQQRRRSLGEQDQMTLRPPEKVDLEPLKSLDQEIARPLENENQEFLKSLKEESVE 816
Query: 222 -----KIPIFNTQKSLSQENLTDTKFTLSRSP 302
+ I + KS QENL K +++P
Sbjct: 817 AVKSLETEILESLKSAGQENLETLKSPETQAP 848
>AB073350-1|BAE45713.1| 1018|Homo sapiens nestin protein.
Length = 1018
Score = 30.7 bits (66), Expect = 2.8
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Frame = +3
Query: 48 TIVTSTDLENRRLSQLDQMQLRAPEQLSGQKPALLAKPSNIPVKAADKQQQKALGVSS-- 221
T+ T R L + DQM LR PE++ + L + P++ +++ K+L S
Sbjct: 154 TLEKETQQRRRSLGEQDQMTLRPPEKVDLEPLKSLDQEIARPLENENQEFLKSLKEESIE 213
Query: 222 -----KIPIFNTQKSLSQENLTDTKFTLSRSP 302
+ I + KS QENL K +++P
Sbjct: 214 AVKSLETEILESLKSAGQENLETLKSPETQAP 245
>AY700780-1|AAU10087.1| 268|Homo sapiens KIAA0515 protein protein.
Length = 268
Score = 29.9 bits (64), Expect = 4.9
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +3
Query: 87 SQLDQMQLRAPEQLSGQKPALLAKPSNIP--VKAADKQQQKALGVSSKIPIFNTQKSLSQ 260
SQL Q+ + P SGQ+P +L + +P + ++ S+ P+ NT + SQ
Sbjct: 168 SQLPQLTMPLPRYGSGQQPLILPQSIQLPPGQSLSVGAPRRIPPPGSQPPVLNTSREPSQ 227
Query: 261 ENLTDTKFTLSRSPPP 308
+ F S+ P
Sbjct: 228 MEMKSFHFADSKQNVP 243
>BC012289-1|AAH12289.1| 326|Homo sapiens KIAA0515 protein protein.
Length = 326
Score = 29.5 bits (63), Expect = 6.5
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +3
Query: 87 SQLDQMQLRAPEQLSGQKPALLAKPSNIP--VKAADKQQQKALGVSSKIPIFNTQKSLSQ 260
SQL Q+ + P SGQ+P +L + +P + ++ S+ P+ NT + SQ
Sbjct: 168 SQLPQLTMPLPRYGSGQQPLILPQSIQLPPGQSLSVGAPRRIPPPGSQPPVLNTSREPSQ 227
Query: 261 ENLTDTKFTLSRSPPP 308
+ F S+ P
Sbjct: 228 MEMKGFHFADSKQNVP 243
>AL358781-5|CAI40218.1| 177|Homo sapiens KIAA0515 protein.
Length = 177
Score = 29.5 bits (63), Expect = 6.5
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +3
Query: 87 SQLDQMQLRAPEQLSGQKPALLAKPSNIP--VKAADKQQQKALGVSSKIPIFNTQKSLSQ 260
SQL Q+ + P SGQ+P +L + +P + ++ S+ P+ NT + SQ
Sbjct: 77 SQLPQLTMPLPRYGSGQQPLILPQSIQLPPGQSLSVGAPRRIPPPGSQPPVLNTSREPSQ 136
Query: 261 ENLTDTKFTLSRSPPP 308
+ F S+ P
Sbjct: 137 MEMKGFHFADSKQNVP 152
>AL358781-1|CAI40214.1| 1535|Homo sapiens KIAA0515 protein.
Length = 1535
Score = 29.5 bits (63), Expect = 6.5
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +3
Query: 87 SQLDQMQLRAPEQLSGQKPALLAKPSNIP--VKAADKQQQKALGVSSKIPIFNTQKSLSQ 260
SQL Q+ + P SGQ+P +L + +P + ++ S+ P+ NT + SQ
Sbjct: 1377 SQLPQLTMPLPRYGSGQQPLILPQSIQLPPGQSLSVGAPRRIPPPGSQPPVLNTSREPSQ 1436
Query: 261 ENLTDTKFTLSRSPPP 308
+ F S+ P
Sbjct: 1437 MEMKGFHFADSKQNVP 1452
>AB011087-1|BAA25441.1| 670|Homo sapiens KIAA0515 protein protein.
Length = 670
Score = 29.5 bits (63), Expect = 6.5
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +3
Query: 87 SQLDQMQLRAPEQLSGQKPALLAKPSNIP--VKAADKQQQKALGVSSKIPIFNTQKSLSQ 260
SQL Q+ + P SGQ+P +L + +P + ++ S+ P+ NT + SQ
Sbjct: 512 SQLPQLTMPLPRYGSGQQPLILPQSIQLPPGQSLSVGAPRRIPPPGSQPPVLNTSREPSQ 571
Query: 261 ENLTDTKFTLSRSPPP 308
+ F S+ P
Sbjct: 572 MEMKGFHFADSKQNVP 587
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,212,904
Number of Sequences: 237096
Number of extensions: 1116700
Number of successful extensions: 2267
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2266
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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