Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_G08
(483 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-... 34 0.12
AY061005-1|AAL28553.1| 527|Drosophila melanogaster HL02088p pro... 33 0.27
AF536543-1|AAN77184.1| 960|Drosophila melanogaster SR-related C... 33 0.27
AE014296-2867|AAX52741.1| 960|Drosophila melanogaster CG33522-P... 33 0.27
AE014296-2343|AAF49771.3| 2294|Drosophila melanogaster CG32133-P... 29 4.4
BT010061-1|AAQ22530.1| 597|Drosophila melanogaster LD15332p pro... 28 5.8
AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA... 28 5.8
AE014296-1464|AAF50410.2| 597|Drosophila melanogaster CG6694-PA... 28 5.8
AE013599-322|AAF59277.1| 681|Drosophila melanogaster CG1850-PA ... 28 5.8
>AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-PA
protein.
Length = 16223
Score = 33.9 bits (74), Expect = 0.12
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Frame = +3
Query: 21 TATYESPKGTIVTSTDLENRRLSQLDQMQLRAPEQLSGQKPALLAKPSNIPVKAADKQQQ 200
T + P+ + T+ ++ +++ D+ L LS +P + + A D+ Q
Sbjct: 14948 TLSTSLPQSSSKTNNIFSSQSVNE-DKTSLEDTRTLSTSQPITITNSPLTDLSAEDQTNQ 15006
Query: 201 KALGVSSK-IPIFNTQKSLS-------QENLTDTKFTLSRSPP 305
+ V SK +P T++S+S Q +T+ +TLS SPP
Sbjct: 15007 EETSVLSKSLPQLTTEESISFQESSAEQNQMTEEPWTLSTSPP 15049
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/103 (22%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Frame = +3
Query: 21 TATYESPKGTIVTSTDLENRRLSQLDQMQLRAPEQLSGQKPALLAKPSNIPVKAADK-QQ 197
T + P+ + T ++ +++ D++ L LS + + + A D+ Q
Sbjct: 10663 TLSTSPPQSSSKTKNIFSSQSVNE-DKVSLEDTRTLSTSQSITITNSLLTDLSAEDQTNQ 10721
Query: 198 QKALGVSSKIPIFNTQKSLS-------QENLTDTKFTLSRSPP 305
++ +S+ +P T++S+S Q +T+ +TLS SPP
Sbjct: 10722 EETSELSNSVPQLTTEESISFQESSAEQNQMTEEPWTLSTSPP 10764
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/98 (22%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Frame = +3
Query: 36 SPKGTIVTSTDLENRRLSQLDQMQLRAPEQLSGQKPALLAKPSNIPVKAADK-QQQKALG 212
SP+ + + ++ + + D++ L LS + + + A D+ Q++
Sbjct: 10572 SPRQSSSKTKNIFSSQSVNEDKVSLENTRTLSTSQSITITNSLLTDLSAEDQTNQEETSE 10631
Query: 213 VSSKIPIFNTQKSLS-------QENLTDTKFTLSRSPP 305
+S+ +P T++S+S Q +T+ +TLS SPP
Sbjct: 10632 LSNSVPQLTTEESISFQESSAKQNQITEEPWTLSTSPP 10669
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/103 (22%), Positives = 47/103 (45%), Gaps = 8/103 (7%)
Frame = +3
Query: 21 TATYESPKGTIVTSTDLENRRLSQLDQMQLRAPEQLSGQKPALLAKPSNIPVKAADK-QQ 197
T + P+ + T ++ +++ D++ L LS + + + A D+ Q
Sbjct: 11185 TLSTSPPQSSSKTKNIFSSQSVNE-DKVSLEDTRTLSTSQSITITNSLLTDLSAEDQTNQ 11243
Query: 198 QKALGVSSKIPIFNTQKSLS-------QENLTDTKFTLSRSPP 305
++ +S +P T++S+S Q +T+ +TLS SPP
Sbjct: 11244 EETSELSKSLPQLTTEESISFQESSAEQNQMTEEPWTLSTSPP 11286
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/103 (22%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Frame = +3
Query: 21 TATYESPKGTIVTSTDLENRRLSQLDQMQLRAPEQLSGQKPALLAKPSNIPVKAADK-QQ 197
T + P+ + T+ ++ +++ D+ L LS + + + A D+ Q
Sbjct: 11280 TLSTSPPQSSSKTNIIFSSQSVNE-DKTSLEDTRTLSTSQSITITNSLLTDLSAEDQTNQ 11338
Query: 198 QKALGVSSKIPIFNTQKSLS-------QENLTDTKFTLSRSPP 305
++ +S+ +P T++S+S Q +T+ +TLS SPP
Sbjct: 11339 EETSELSNSVPQLTTEESISFQESSAEQNQMTEEPWTLSTSPP 11381
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/103 (22%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Frame = +3
Query: 21 TATYESPKGTIVTSTDLENRRLSQLDQMQLRAPEQLSGQKPALLAKPSNIPVKAADK-QQ 197
T + P+ + T+ ++ +++ D+ L LS + + + A D+ Q
Sbjct: 11565 TLSTSPPQSSSKTNIIFSSQSVNE-DKTSLEDTRTLSTSQSITITNSLLTDLSAEDQTNQ 11623
Query: 198 QKALGVSSKIPIFNTQKSLS-------QENLTDTKFTLSRSPP 305
++ +S+ +P T++S+S Q +T+ +TLS SPP
Sbjct: 11624 EETSELSNSVPQLTTEESISFQESSAEQNQMTEEPWTLSTSPP 11666
>AY061005-1|AAL28553.1| 527|Drosophila melanogaster HL02088p
protein.
Length = 527
Score = 32.7 bits (71), Expect = 0.27
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Frame = +3
Query: 30 YESPKGTIVTSTDLENRRLSQLDQMQLRAP------EQLSGQKPALLAKPSNIPVKAADK 191
Y+ P G +V LE+ LD +R P E+L+ A + PS+ + D
Sbjct: 220 YDLPAGLMVPLIRLEDYNYKALDPADIRLPAPAPQSERLTNALNAFYSAPSHD--RPRDN 277
Query: 192 QQQKALGVSSKIPIFNTQKSLSQENLTDTKFTLSRSPPP 308
+ + LG+ + N + +E + D SRSP P
Sbjct: 278 EGWEKLGLYEYYKVKNAARKQKEEEIKDGIREKSRSPSP 316
>AF536543-1|AAN77184.1| 960|Drosophila melanogaster SR-related CTD
associated factor 6 protein.
Length = 960
Score = 32.7 bits (71), Expect = 0.27
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Frame = +3
Query: 30 YESPKGTIVTSTDLENRRLSQLDQMQLRAP------EQLSGQKPALLAKPSNIPVKAADK 191
Y+ P G +V LE+ LD +R P E+L+ A + PS+ + D
Sbjct: 653 YDLPAGLMVPLIRLEDYNYKALDPADIRLPAPAPQSERLTNALNAFYSAPSHD--RPRDN 710
Query: 192 QQQKALGVSSKIPIFNTQKSLSQENLTDTKFTLSRSPPP 308
+ + LG+ + N + +E + D SRSP P
Sbjct: 711 EGWEKLGLYEYYKVKNAARKQKEEEIKDGIREKSRSPSP 749
>AE014296-2867|AAX52741.1| 960|Drosophila melanogaster CG33522-PA,
isoform A protein.
Length = 960
Score = 32.7 bits (71), Expect = 0.27
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Frame = +3
Query: 30 YESPKGTIVTSTDLENRRLSQLDQMQLRAP------EQLSGQKPALLAKPSNIPVKAADK 191
Y+ P G +V LE+ LD +R P E+L+ A + PS+ + D
Sbjct: 653 YDLPAGLMVPLIRLEDYNYKALDPADIRLPAPAPQSERLTNALNAFYSAPSHD--RPRDN 710
Query: 192 QQQKALGVSSKIPIFNTQKSLSQENLTDTKFTLSRSPPP 308
+ + LG+ + N + +E + D SRSP P
Sbjct: 711 EGWEKLGLYEYYKVKNAARKQKEEEIKDGIREKSRSPSP 749
>AE014296-2343|AAF49771.3| 2294|Drosophila melanogaster CG32133-PA
protein.
Length = 2294
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 78 RRLSQLDQMQLRAPEQLSGQKPALLAKPSNIPVKAADKQQQKALGVSSKIPIFNT 242
RR+ L Q Q +AP+Q Q+ ++A P ++ +QQQ A+GV +P+ T
Sbjct: 1730 RRVVALPQQQ-QAPQQHLVQQQIVVA-----PTQSPQQQQQMAVGVGVGVPVQRT 1778
>BT010061-1|AAQ22530.1| 597|Drosophila melanogaster LD15332p
protein.
Length = 597
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 27 TYESPKGTIVTSTDLENRRLSQLDQMQLRAPEQLSGQKPALLAKPSNIPVKAADK 191
+++ P I+T D+E ++ D+ Q A ++P L PS IP+ +K
Sbjct: 542 SHKEPAEAILTRDDVEQKKPEAEDEDQKEAGAPCPRRRPQLGTLPSFIPLGGEEK 596
>AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA
protein.
Length = 3111
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +3
Query: 33 ESPKGTIVTSTDLENRRLSQLDQMQL--RAPE-QLSGQKPALLAKPSNIPVKAADKQQQK 203
+ PKG +T+ RRL QL+Q L RA + + L KP + K + K+Q+K
Sbjct: 1734 KQPKGESKPTTEDLTRRLEQLEQQLLEERAKNGSIPPENEVLEEKPEKLEEKDSCKKQEK 1793
>AE014296-1464|AAF50410.2| 597|Drosophila melanogaster CG6694-PA
protein.
Length = 597
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +3
Query: 27 TYESPKGTIVTSTDLENRRLSQLDQMQLRAPEQLSGQKPALLAKPSNIPVKAADK 191
+++ P I+T D+E ++ D+ Q A ++P L PS IP+ +K
Sbjct: 542 SHKEPAEAILTRDDVEQKKPEAEDEDQKEAGAPCPRRRPQLGTLPSFIPLGGEEK 596
>AE013599-322|AAF59277.1| 681|Drosophila melanogaster CG1850-PA
protein.
Length = 681
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +3
Query: 87 SQLDQMQLRAPEQLSGQKPALLAKPSNIPVKAADKQQQKALGVSSKIPIFNTQKSLSQ 260
++L+ ++ +QL GQ P + IPV A QQ+ + I I T + Q
Sbjct: 164 ARLEVLRAEQAQQLLGQSPEYQYEKEKIPVMYAQPMQQQIVPYQENILIKTTTQDAPQ 221
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,413,528
Number of Sequences: 53049
Number of extensions: 360284
Number of successful extensions: 881
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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