Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_G06
         (470 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    29   0.11 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   4.1  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   4.1  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   4.1  
AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    23   7.1  

>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 28.7 bits (61), Expect = 0.11
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
 Frame = -3

Query: 249  HGQLYVAS--SHVNNPSSL----YAMFSNGYTM*RR*L*SKINQKIHPKNAAQSHYSTRT 88
            +G  Y+++  + +NNP  L    YAM  NG+TM +  L   I+  I   N  + ++ T  
Sbjct: 1009 NGMNYLSNQLAFINNPYDLSIATYAMMLNGHTMKKEALDKLIDMSISDNNKKERYWGTTN 1068

Query: 87   KL 82
            ++
Sbjct: 1069 QI 1070


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -2

Query: 409  VFLEFLSFHTIFRLVLNES 353
            VF + ++ HTI RL+LNE+
Sbjct: 1065 VFTDQVNRHTITRLLLNEA 1083


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 9/40 (22%)
 Frame = -1

Query: 236 MWLRHMLIILAACM-LC-------SPMAIRCNDG-DYNPK 144
           +WL+H+  +LAA M +C        P+ + C+DG D  P+
Sbjct: 390 LWLQHLSGLLAASMVVCHAIERNGRPVLVHCSDGWDRTPQ 429


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 9/40 (22%)
 Frame = -1

Query: 236 MWLRHMLIILAACM-LC-------SPMAIRCNDG-DYNPK 144
           +WL+H+  +LAA M +C        P+ + C+DG D  P+
Sbjct: 390 LWLQHLSGLLAASMVVCHAIERNGRPVLVHCSDGWDRTPQ 429


>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 22.6 bits (46), Expect = 7.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 72  AVPTTSSAWNSDFGQHFLDVSFGLF 146
           A  +T+  WN  FG  ++ +  GLF
Sbjct: 435 AKKSTNEIWNIFFGGRYIILLMGLF 459


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 467,454
Number of Sequences: 2352
Number of extensions: 9279
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41245467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)