Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_G04
         (475 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118868-1|AAM50728.1|  156|Drosophila melanogaster GM26647p pro...   213   1e-55
AF216206-1|AAF65682.1|  156|Drosophila melanogaster ribosomal pr...   213   1e-55
AE014298-2436|AAN09413.1|  156|Drosophila melanogaster CG4464-PC...   213   1e-55
AE014298-2435|AAN09412.1|  156|Drosophila melanogaster CG4464-PB...   213   1e-55
AE014298-2434|AAF48633.1|  156|Drosophila melanogaster CG4464-PA...   213   1e-55
X73153-1|CAA51677.1|  156|Drosophila melanogaster ribosomal prot...   212   2e-55
AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p pro...   171   3e-43
AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB...   171   3e-43
BT022922-1|AAY55338.1|  148|Drosophila melanogaster IP08374p pro...    27   9.8  
BT022287-1|AAY54703.1|  148|Drosophila melanogaster IP08174p pro...    27   9.8  
BT012454-1|AAS93725.1|  902|Drosophila melanogaster RE64461p pro...    27   9.8  
AF219383-1|AAF23183.1| 1023|Drosophila melanogaster tiptop prote...    27   9.8  
AF145672-1|AAD38647.1| 1189|Drosophila melanogaster BcDNA.GH1217...    27   9.8  
AE014134-3557|AAF57242.3| 1024|Drosophila melanogaster CG12630-P...    27   9.8  
AE013599-184|AAF57363.1| 1688|Drosophila melanogaster CG3274-PA ...    27   9.8  
AE013599-159|AAM68349.1|  174|Drosophila melanogaster CG30432-PA...    27   9.8  

>AY118868-1|AAM50728.1|  156|Drosophila melanogaster GM26647p
           protein.
          Length = 156

 Score =  213 bits (519), Expect = 1e-55
 Identities = 99/148 (66%), Positives = 118/148 (79%)
 Frame = +3

Query: 24  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 203
           M  VTVKD++Q  + K VA  LKK GK+KVPD MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 204 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQDGG 383
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK  DGG
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120

Query: 384 RILTTQARRDLDRIAAQVRLKAKQPAKQ 467
           R L++  +RDLDRIA Q+  K +  AKQ
Sbjct: 121 RKLSSIGQRDLDRIANQIVFKQRDAAKQ 148


>AF216206-1|AAF65682.1|  156|Drosophila melanogaster ribosomal
           protein S19 protein.
          Length = 156

 Score =  213 bits (519), Expect = 1e-55
 Identities = 99/148 (66%), Positives = 118/148 (79%)
 Frame = +3

Query: 24  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 203
           M  VTVKD++Q  + K VA  LKK GK+KVPD MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 204 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQDGG 383
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK  DGG
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120

Query: 384 RILTTQARRDLDRIAAQVRLKAKQPAKQ 467
           R L++  +RDLDRIA Q+  K +  AKQ
Sbjct: 121 RKLSSIGQRDLDRIANQIVFKQRDAAKQ 148


>AE014298-2436|AAN09413.1|  156|Drosophila melanogaster CG4464-PC,
           isoform C protein.
          Length = 156

 Score =  213 bits (519), Expect = 1e-55
 Identities = 99/148 (66%), Positives = 118/148 (79%)
 Frame = +3

Query: 24  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 203
           M  VTVKD++Q  + K VA  LKK GK+KVPD MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 204 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQDGG 383
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK  DGG
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120

Query: 384 RILTTQARRDLDRIAAQVRLKAKQPAKQ 467
           R L++  +RDLDRIA Q+  K +  AKQ
Sbjct: 121 RKLSSIGQRDLDRIANQIVFKQRDAAKQ 148


>AE014298-2435|AAN09412.1|  156|Drosophila melanogaster CG4464-PB,
           isoform B protein.
          Length = 156

 Score =  213 bits (519), Expect = 1e-55
 Identities = 99/148 (66%), Positives = 118/148 (79%)
 Frame = +3

Query: 24  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 203
           M  VTVKD++Q  + K VA  LKK GK+KVPD MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 204 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQDGG 383
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK  DGG
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120

Query: 384 RILTTQARRDLDRIAAQVRLKAKQPAKQ 467
           R L++  +RDLDRIA Q+  K +  AKQ
Sbjct: 121 RKLSSIGQRDLDRIANQIVFKQRDAAKQ 148


>AE014298-2434|AAF48633.1|  156|Drosophila melanogaster CG4464-PA,
           isoform A protein.
          Length = 156

 Score =  213 bits (519), Expect = 1e-55
 Identities = 99/148 (66%), Positives = 118/148 (79%)
 Frame = +3

Query: 24  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 203
           M  VTVKD++Q  + K VA  LKK GK+KVPD MD+VKTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASI 60

Query: 204 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQDGG 383
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK  DGG
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120

Query: 384 RILTTQARRDLDRIAAQVRLKAKQPAKQ 467
           R L++  +RDLDRIA Q+  K +  AKQ
Sbjct: 121 RKLSSIGQRDLDRIANQIVFKQRDAAKQ 148


>X73153-1|CAA51677.1|  156|Drosophila melanogaster ribosomal protein
           S19 protein.
          Length = 156

 Score =  212 bits (518), Expect = 2e-55
 Identities = 98/148 (66%), Positives = 118/148 (79%)
 Frame = +3

Query: 24  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 203
           M  VTVKD++Q  + K VA  LKK GK+KVPD MD++KTA+FKELAPYDPDWFYVRCA+I
Sbjct: 1   MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIIKTAKFKELAPYDPDWFYVRCASI 60

Query: 204 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQDGG 383
           LRH+Y RSP GV ++TKI+GGRKRNGV PSHFCR++   ARKALQALE  +LVEK  DGG
Sbjct: 61  LRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGG 120

Query: 384 RILTTQARRDLDRIAAQVRLKAKQPAKQ 467
           R L++  +RDLDRIA Q+  K +  AKQ
Sbjct: 121 RKLSSIGQRDLDRIANQIVFKQRDAAKQ 148


>AY119257-1|AAM51117.1|  155|Drosophila melanogaster SD22440p
           protein.
          Length = 155

 Score =  171 bits (417), Expect = 3e-43
 Identities = 80/144 (55%), Positives = 103/144 (71%)
 Frame = +3

Query: 24  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 203
           M  VTVK+++Q  + K +AA LKK GK+ VP+    +KT +FKE AP D DWFY RCA+I
Sbjct: 1   MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASI 60

Query: 204 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQDGG 383
           +RH+Y+RSP GV   TK++ GRKRNGV PS  CRSS    RKALQALEA  +VE+  DGG
Sbjct: 61  MRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGG 120

Query: 384 RILTTQARRDLDRIAAQVRLKAKQ 455
           R LT Q +R+LDRIA ++  K ++
Sbjct: 121 RKLTPQGQRNLDRIANKIVAKQRE 144


>AE014297-3411|AAN13960.1|  155|Drosophila melanogaster CG5338-PB
           protein.
          Length = 155

 Score =  171 bits (417), Expect = 3e-43
 Identities = 80/144 (55%), Positives = 103/144 (71%)
 Frame = +3

Query: 24  MRSVTVKDVEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTARFKELAPYDPDWFYVRCAAI 203
           M  VTVK+++Q  + K +AA LKK GK+ VP+    +KT +FKE AP D DWFY RCA+I
Sbjct: 1   MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASI 60

Query: 204 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQALEALKLVEKVQDGG 383
           +RH+Y+RSP GV   TK++ GRKRNGV PS  CRSS    RKALQALEA  +VE+  DGG
Sbjct: 61  MRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGG 120

Query: 384 RILTTQARRDLDRIAAQVRLKAKQ 455
           R LT Q +R+LDRIA ++  K ++
Sbjct: 121 RKLTPQGQRNLDRIANKIVAKQRE 144


>BT022922-1|AAY55338.1|  148|Drosophila melanogaster IP08374p
           protein.
          Length = 148

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = -3

Query: 92  FQVSGYSFDDFVLFNILH 39
           FQV+GY  +DFVLF+ ++
Sbjct: 47  FQVTGYRLNDFVLFSYMN 64


>BT022287-1|AAY54703.1|  148|Drosophila melanogaster IP08174p
           protein.
          Length = 148

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = -3

Query: 92  FQVSGYSFDDFVLFNILH 39
           FQV+GY  +DFVLF+ ++
Sbjct: 47  FQVTGYRLNDFVLFSYMN 64


>BT012454-1|AAS93725.1|  902|Drosophila melanogaster RE64461p
           protein.
          Length = 902

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 48  VEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTAR 146
           VEQ ++ +   +H +K GK+ V +HM   +  R
Sbjct: 699 VEQAELYRIYLSHCQKAGKLSVVNHMQFPRLVR 731


>AF219383-1|AAF23183.1| 1023|Drosophila melanogaster tiptop protein
           protein.
          Length = 1023

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 16/30 (53%), Positives = 18/30 (60%)
 Frame = -3

Query: 404 GLGGENTAAILNLLYQLQRFKSLESFTSNT 315
           GLG E   ++LN L QL   KS ES TS T
Sbjct: 635 GLGAEKPPSVLNALEQLIE-KSFESRTSRT 663


>AF145672-1|AAD38647.1| 1189|Drosophila melanogaster BcDNA.GH12174
           protein.
          Length = 1189

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 48  VEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTAR 146
           VEQ ++ +   +H +K GK+ V +HM   +  R
Sbjct: 200 VEQAELYRIYLSHCQKAGKLSVVNHMQFPRLVR 232


>AE014134-3557|AAF57242.3| 1024|Drosophila melanogaster CG12630-PA
           protein.
          Length = 1024

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 16/30 (53%), Positives = 18/30 (60%)
 Frame = -3

Query: 404 GLGGENTAAILNLLYQLQRFKSLESFTSNT 315
           GLG E   ++LN L QL   KS ES TS T
Sbjct: 636 GLGAEKPPSVLNALEQLIE-KSFESRTSRT 664


>AE013599-184|AAF57363.1| 1688|Drosophila melanogaster CG3274-PA
           protein.
          Length = 1688

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = +3

Query: 48  VEQDKIVKTVAAHLKKIGKVKVPDHMDLVKTAR 146
           VEQ ++ +   +H +K GK+ V +HM   +  R
Sbjct: 699 VEQAELYRIYLSHCQKAGKLSVVNHMQFPRLVR 731


>AE013599-159|AAM68349.1|  174|Drosophila melanogaster CG30432-PA
           protein.
          Length = 174

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/18 (55%), Positives = 15/18 (83%)
 Frame = -3

Query: 92  FQVSGYSFDDFVLFNILH 39
           FQV+GY  +DFVLF+ ++
Sbjct: 73  FQVTGYRLNDFVLFSYMN 90


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,458,251
Number of Sequences: 53049
Number of extensions: 428038
Number of successful extensions: 1171
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1622204766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)