Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_G03
(425 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 29 0.23
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 29 0.30
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 0.40
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 28 0.53
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 28 0.70
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb... 27 0.92
SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces po... 27 0.92
SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, An... 27 1.2
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 27 1.6
SPBC839.10 |usp107|snu71|U1 snRNP-associated protein Usp107|Schi... 27 1.6
SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein Usp106|Sch... 26 2.8
SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA polymerase|Sc... 26 2.8
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 3.7
SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces ... 25 4.9
SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomy... 25 4.9
SPAC1565.07c |||TATA binding protein interacting protein |Schizo... 25 4.9
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 25 4.9
SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|c... 25 4.9
SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr 2|... 25 6.5
SPBC2D10.11c |||nucleosome assembly protein Nap2 |Schizosaccharo... 25 6.5
SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain p... 25 6.5
SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyce... 25 6.5
SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces pom... 25 6.5
SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces ... 25 6.5
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 24 8.6
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 24 8.6
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 24 8.6
SPBC776.10c |cog6||Golgi transport complex peripheral subunit Co... 24 8.6
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 24 8.6
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 29.5 bits (63), Expect = 0.23
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Frame = +2
Query: 113 AMVRRDAPNTILQDLEKHAQDFQKTI------SEQFNAIVNSKNTESLNKALKEGSDSMV 274
A+ +DA T L +L++ T QF A N+K E + +EG D+
Sbjct: 65 ALQGKDAVLTTLNELKELLSQIDATRIRDEKHKRQFEATENAKRKEEIEAQYREGYDTAQ 124
Query: 275 QQVSELSNSLQGA 313
+QVS L L+ A
Sbjct: 125 KQVSSLVRFLRFA 137
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 29.1 bits (62), Expect = 0.30
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2
Query: 347 LQQARQNLERTVEDLRNAHPDVEK 418
++QAR E T+ED++ A P++EK
Sbjct: 126 IEQARPTEEITIEDMKQAVPEIEK 149
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 28.7 bits (61), Expect = 0.40
Identities = 23/80 (28%), Positives = 42/80 (52%)
Frame = +2
Query: 152 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 331
DLEK +D +K + ++ TE+++ +L+EG + ++++ELS+ L+ A
Sbjct: 1341 DLEKALKDSEKNFLRK-----EAEMTENIH-SLEEGKEETKKEIAELSSRLEDNQL-ATN 1393
Query: 332 KAKEVLQQARQNLERTVEDL 391
K K L Q + R ED+
Sbjct: 1394 KLKNQLDHLNQEI-RLKEDV 1412
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 28.3 bits (60), Expect = 0.53
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 173 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD-ANGKAKEVL 349
D T Q + I+ ++ +ES + A SM + S+S A NG+AKE
Sbjct: 426 DLNDTTKNQNDQILPNETSESDDDA--NSISSMENEEERTSDSKSSAKQGKGNGRAKETP 483
Query: 350 QQARQNLERTVED 388
++ R ++T ED
Sbjct: 484 EEKRARKKKTKED 496
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.9 bits (59), Expect = 0.70
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +2
Query: 221 KNTESLNKALKEGSDSMVQQVSELSNSLQGA------LTDANGKAKEVLQQARQNLERT 379
K T++ + +E +S + + E + L A L D+ KAK L+QAR LERT
Sbjct: 364 KETDTTSVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELEQARIELERT 422
>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
membrane proteins, ESCRT 0 complex|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 610
Score = 27.5 bits (58), Expect = 0.92
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 366 FWRACWSTSLALPFASVNAPCRLLDNSETCCTMESEPSFS 247
F C S +L+LP +N P R+ D +C ++ ++P S
Sbjct: 199 FCNQCSSKTLSLPHLGINQPVRVCD---SCYSLRTKPKGS 235
>SPBC365.20c ||SPBC557.06c|nicotinamidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 27.5 bits (58), Expect = 0.92
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 131 APNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQ 307
A + +++ HA+ + T + V +TES N+A+K+ D+ ++ +SE LQ
Sbjct: 159 ATDICVKETALHARHWYNTYI--ISEAVKGSSTESHNQAIKDFRDAKIEVISEKDPILQ 215
>SPBC1734.04 ||SPBC337.20|mannosyltransferase complex subunit, Anp
family |Schizosaccharomyces pombe|chr 2|||Manual
Length = 430
Score = 27.1 bits (57), Expect = 1.2
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Frame = +2
Query: 68 AKCFVLFACVALAHGAMVRRD-----APNTILQDLEKHAQD 175
A+ ++L A + H + RD APNTIL+DL +H +D
Sbjct: 201 ARNWLLSAAIQPYHSWVYWRDVDVETAPNTILEDLMRHDKD 241
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.6 bits (56), Expect = 1.6
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +2
Query: 188 ISEQFN-AIVNSKNTESLNKALKEGSDSMVQQVSELSNS--LQGALTDANGKAKEVLQQA 358
I +Q N +I N KNT N + K + + +S +SNS A+ + +AKE + A
Sbjct: 483 IPQQSNKSIGNHKNTSVANVSSKVANSKFERNISMMSNSNASSPAIFEVGAEAKEKTKDA 542
>SPBC839.10 |usp107|snu71|U1 snRNP-associated protein
Usp107|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.6 bits (56), Expect = 1.6
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Frame = +2
Query: 191 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTD------ANGKAKEV-- 346
+EQF+ + + N + + G + + ++++ N +G + A K KE+
Sbjct: 189 NEQFSRALEALNDFVVPPLYEGGPSTRLSLITDVEN--EGLYREWQTSRYARNKQKEINI 246
Query: 347 LQQARQNLERTVEDLRN 397
LQQ R NLER +D+ N
Sbjct: 247 LQQIRFNLERICQDIGN 263
>SPCC16A11.13 |usp106|luc7|U1 snRNP-associated protein
Usp106|Schizosaccharomyces pombe|chr 3|||Manual
Length = 264
Score = 25.8 bits (54), Expect = 2.8
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +2
Query: 146 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 325
L+DLE+H D K I I ++ ++ K +E D +++ + +S++ +T+
Sbjct: 85 LEDLERHVDDCNKRID-----IAEARREKT--KEEEERIDELMRDIIHTDHSIEVIITEM 137
Query: 326 NGKAKEVL 349
AK L
Sbjct: 138 EALAKRKL 145
>SPAC26H5.12 |rpo41||mitochondrial DNA-directed RNA
polymerase|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1120
Score = 25.8 bits (54), Expect = 2.8
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 314 LTDANGKAKEVLQQARQN 367
LTD AKE+LQQAR N
Sbjct: 83 LTDVLSNAKELLQQARLN 100
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 25.4 bits (53), Expect = 3.7
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 137 NTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 304
NT+ + + K +Q FQ S +FN + N ++K+L++ + S+ N L
Sbjct: 487 NTVDEAITKQSQTFQLVNSNEFNEV----NANDVHKSLRQNCAKLDFDDSKSKNLL 538
>SPBC1198.10c |||asparagine-tRNA ligase Slm5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 441
Score = 25.0 bits (52), Expect = 4.9
Identities = 13/27 (48%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = -3
Query: 144 IVLGASR-RTIAP*ARATQANNTKHLA 67
+ LG SR TI+P RA Q++ ++HLA
Sbjct: 214 LALGLSRVYTISPAFRAEQSHTSRHLA 240
>SPAC19B12.02c |||1,3-beta-glucanosyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 25.0 bits (52), Expect = 4.9
Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -3
Query: 387 SSTVRSKFWRACWSTSLALPFASVNAPCRLLDNSETCCTME--SEPSFSALF 238
++T+ + + W + +LP A C +D++ +C + S +S LF
Sbjct: 340 TATMSCQATNSAWMAATSLPPTPSEAVCECMDSTRSCVINDDVSSDDYSDLF 391
>SPAC1565.07c |||TATA binding protein interacting protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1220
Score = 25.0 bits (52), Expect = 4.9
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = +2
Query: 236 LNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLRNAHPDVE 415
L K E SD ++ ++ LS+ L L DAN L+ L+ ++ L +A P+V+
Sbjct: 6 LLKKYVESSDKDIRYMA-LSD-LAARLNDANHLKNLKLESFPDTLDVLLQALSDASPEVQ 63
Query: 416 KQA 424
++A
Sbjct: 64 QEA 66
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 25.0 bits (52), Expect = 4.9
Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +2
Query: 98 ALAHGAM-VRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDS 268
+L GA V ++ I K DF K I FN + L A+ E S +
Sbjct: 46 SLTDGAKSVAKERQKKISDPARKFFSDFSKLIDNSFNVFAKKNEGDLLQNAIYELSQA 103
>SPAC1D4.09c |||DUF602 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 240
Score = 25.0 bits (52), Expect = 4.9
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 182 KTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNS 301
KT+S++ + S+ T SLNKA K+ + + ++ +S S
Sbjct: 164 KTLSKRLLDLALSEKTHSLNKASKKSNKNGDKKRKHVSKS 203
>SPBC19G7.04 |||HMG box protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 362
Score = 24.6 bits (51), Expect = 6.5
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = -3
Query: 225 FFELTIALNCSLIVFWKSWACFSRSCNIVLGASRRTIAP 109
+ E+T N + +K W C + CN + G ++I P
Sbjct: 247 YIEITSKHNYDIDFKYK-WLCINEKCNKLYGRHSKSINP 284
>SPBC2D10.11c |||nucleosome assembly protein Nap2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 379
Score = 24.6 bits (51), Expect = 6.5
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 335 AKEVLQQARQNLERTVEDLRNAHPDV 412
+K L++ARQ L+ +ED ++AH +V
Sbjct: 31 SKAALEKARQTLQSQLED-KSAHDEV 55
>SPBC19F5.05c |ppp1|SPBC25D12.01c|pescadillo-family BRCT domain
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 607
Score = 24.6 bits (51), Expect = 6.5
Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Frame = +2
Query: 122 RRDAPNTILQ--DLEKHAQDFQKTISEQFNAIVNSK----NTESLNKALKEGSDSMVQQV 283
+ D P + Q D E+ + Q+ + + + S+ N++S K K D++ +
Sbjct: 492 KNDEPENVEQIDDAEEEDLEHQRELEAEAGGVAYSEYVKQNSKSAKKTKKRQRDTLTAEE 551
Query: 284 SELSNSLQGALTDANGKAKEV---LQQARQNLERTVEDLRNAHPDVEKQ 421
E + + + + K +++ L+ E LRN D+EK+
Sbjct: 552 KEEKEAKELSKMMMSNKQRKLYSKLKNENSKNENYNNALRNRKRDIEKR 600
>SPAC25G10.01 ||SPAC2C4.18|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 297
Score = 24.6 bits (51), Expect = 6.5
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 25 NFASNSHRLRHRHGRQVLRVVRLRCPRSRSDGP 123
N S R RH HGR P R+D P
Sbjct: 248 NVDSRPRRERHFHGRSFAHAEHHSVPNMRNDTP 280
>SPAPB1A10.15 |||Arv1-like family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 220
Score = 24.6 bits (51), Expect = 6.5
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -3
Query: 222 FELTIALNCSLIVFWKSWACFSRSCNIVLGASRRTI 115
+++++ L L + WKSW S S ++L +S R +
Sbjct: 139 YQISVVLLLCLTMGWKSWT--SASGAVILSSSTRML 172
>SPAC9G1.06c |cyk3||cytokinesis protein Cyk3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 886
Score = 24.6 bits (51), Expect = 6.5
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +2
Query: 113 AMVRRDAPNTILQDLEKHAQDFQKTISEQFNA--IVNSKNTESLNKALKEGSDSMVQQVS 286
+M R A + +K + D T S+Q +V S N +LNK +E SDS+ Q S
Sbjct: 75 SMSRTSASSFRYSSPQKSSIDTPITSSDQGLTPDLVGSSN--ALNKPTRE-SDSLKHQKS 131
Query: 287 E-LSNSLQGALTDANGKAKEVLQQARQNLE 373
+ NSL +L+ ++ +R NL+
Sbjct: 132 HPMLNSLGSSLSLKKSVSRPPSSMSRTNLD 161
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 24.2 bits (50), Expect = 8.6
Identities = 19/79 (24%), Positives = 33/79 (41%)
Frame = +2
Query: 173 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQ 352
+ + + EQ + N N+E ++ LKE Q L N L+ L A K +
Sbjct: 527 EMNQRLKEQIESYENEVNSEITSRTLKEFETLKTQYEKNLCN-LREQLKTARMKLADKYP 585
Query: 353 QARQNLERTVEDLRNAHPD 409
Q N ++ L+++ D
Sbjct: 586 QG-DNTSENIDWLKHSLRD 603
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 24.2 bits (50), Expect = 8.6
Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +2
Query: 248 LKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQA---RQNLERTVEDLRNAHPDVEK 418
+ + S++ V + E + L L+ K+ L++ +Q L EDLR D EK
Sbjct: 1005 ITKDSETRVALLLEENKHLNNELSSHRNAEKQHLEKENDYKQQLLLVTEDLRKTREDYEK 1064
Query: 419 Q 421
+
Sbjct: 1065 E 1065
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 24.2 bits (50), Expect = 8.6
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2
Query: 230 ESLNKALKEGSDSMVQQVSELSNSLQGAL 316
E + A E S++Q++SEL +QG L
Sbjct: 79 EDMANAFAEKRRSVLQELSELEEEVQGIL 107
>SPBC776.10c |cog6||Golgi transport complex peripheral subunit Cog6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 24.2 bits (50), Expect = 8.6
Identities = 13/53 (24%), Positives = 27/53 (50%)
Frame = +2
Query: 149 QDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQ 307
Q ++K + +KT+SE + + + N+ LKE + S V + + +L+
Sbjct: 582 QQIDKFSTFIRKTLSETIDNLQLLTSPIVTNQVLKETAISFVGAIETVDKALE 634
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 24.2 bits (50), Expect = 8.6
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +2
Query: 230 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDLR 394
ES N+ DSM ++ ELSN L+ AN K E R+ + DLR
Sbjct: 824 ESSNQEYTATVDSMNSRILELSNDLR----VANSKLSECSDDVRRLTLQNSFDLR 874
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,507,422
Number of Sequences: 5004
Number of extensions: 24722
Number of successful extensions: 151
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 152416050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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