Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_G03
(425 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 cha... 41 8e-04
M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein ( D.me... 41 8e-04
BT015222-1|AAT94451.1| 1296|Drosophila melanogaster RE35801p pro... 41 8e-04
AY095001-1|AAM11329.1| 1026|Drosophila melanogaster GH02457p pro... 41 8e-04
AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB... 41 8e-04
AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA... 41 8e-04
BT001839-1|AAN71596.1| 241|Drosophila melanogaster RH51979p pro... 33 0.16
AY113560-1|AAM29565.1| 86|Drosophila melanogaster RH08410p pro... 33 0.21
AE014296-2258|AAF49832.1| 86|Drosophila melanogaster CG11051-P... 33 0.21
AY060755-1|AAL28303.1| 230|Drosophila melanogaster GH20817p pro... 32 0.28
AE013599-924|AAF58901.1| 232|Drosophila melanogaster CG1648-PB,... 32 0.28
AE013599-923|AAF58898.1| 230|Drosophila melanogaster CG1648-PA,... 32 0.28
U86404-1|AAB49975.2| 993|Drosophila melanogaster egalitarian pr... 30 1.1
BT009999-1|AAQ22468.1| 1004|Drosophila melanogaster RE33408p pro... 30 1.1
AE013599-3677|AAF47054.3| 885|Drosophila melanogaster CG4051-PA... 30 1.1
AE014134-2054|AAF53089.2| 1931|Drosophila melanogaster CG33694-P... 30 1.5
AY069225-1|AAL39370.1| 287|Drosophila melanogaster GH27237p pro... 29 2.0
AE014298-1296|AAF46459.1| 287|Drosophila melanogaster CG12056-P... 29 2.0
AY070951-1|AAL48573.1| 208|Drosophila melanogaster RE04882p pro... 29 2.6
AE014297-499|AAF54094.1| 208|Drosophila melanogaster CG1330-PA ... 29 2.6
AE013599-1923|AAF58230.1| 3257|Drosophila melanogaster CG12864-P... 29 2.6
AE001572-17|AAD19807.1| 208|Drosophila melanogaster cuticle pro... 29 2.6
AY122116-1|AAM52628.1| 343|Drosophila melanogaster GH18178p pro... 29 3.4
AY118377-1|AAM48406.1| 1265|Drosophila melanogaster RE24170p pro... 29 3.4
AY051730-1|AAK93154.1| 550|Drosophila melanogaster LD25919p pro... 29 3.4
AF186472-1|AAF01416.1| 1409|Drosophila melanogaster condensin su... 29 3.4
AE014296-2323|AAF49788.1| 1265|Drosophila melanogaster CG9206-PA... 29 3.4
AE014134-2761|AAF53560.1| 1409|Drosophila melanogaster CG11397-P... 29 3.4
AE014134-2329|AAF53284.1| 341|Drosophila melanogaster CG16826-P... 29 3.4
X04132-3|CAA27749.1| 455|Drosophila melanogaster protein ( Dros... 28 4.5
AF185287-1|AAF13306.1| 1409|Drosophila melanogaster XCAP-C/SMC4 ... 28 6.0
BT023543-1|AAY84943.1| 191|Drosophila melanogaster IP09828p pro... 27 7.9
BT023530-1|AAY84930.1| 258|Drosophila melanogaster IP09928p pro... 27 7.9
AE014297-973|AAF54405.1| 258|Drosophila melanogaster CG16790-PA... 27 7.9
AE014134-914|AAF52246.1| 593|Drosophila melanogaster CG12512-PA... 27 7.9
>M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 chain
protein.
Length = 1788
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +2
Query: 224 NTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 391
N +S+ A KE +D ++ + + SL A ++ GKAK+ +QQA N+E +DL
Sbjct: 1575 NLQSIANATKEKADKILDSANSVVESLAAA-DESQGKAKDAIQQANSNIELAGQDL 1629
>M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein (
D.melanogaster lamininB1 subunit mRNA, complete cds. ).
Length = 1788
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +2
Query: 224 NTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 391
N +S+ A KE +D ++ + + SL A ++ GKAK+ +QQA N+E +DL
Sbjct: 1575 NLQSIANATKEKADKILDSANSVVESLAAA-DESQGKAKDAIQQANSNIELAGQDL 1629
>BT015222-1|AAT94451.1| 1296|Drosophila melanogaster RE35801p protein.
Length = 1296
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +2
Query: 224 NTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 391
N +S+ A KE +D ++ + + SL A ++ GKAK+ +QQA N+E +DL
Sbjct: 1083 NLQSIANATKEKADKILDSANSVVESLAAA-DESQGKAKDAIQQANSNIELAGQDL 1137
>AY095001-1|AAM11329.1| 1026|Drosophila melanogaster GH02457p
protein.
Length = 1026
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +2
Query: 224 NTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 391
N +S+ A KE +D ++ + + SL A ++ GKAK+ +QQA N+E +DL
Sbjct: 813 NLQSIANATKEKADKILDSANSVVESLAAA-DESQGKAKDAIQQANSNIELAGQDL 867
>AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB,
isoform B protein.
Length = 1788
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +2
Query: 224 NTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 391
N +S+ A KE +D ++ + + SL A ++ GKAK+ +QQA N+E +DL
Sbjct: 1575 NLQSIANATKEKADKILDSANSVVESLAAA-DESQGKAKDAIQQANSNIELAGQDL 1629
>AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA,
isoform A protein.
Length = 1788
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/56 (35%), Positives = 33/56 (58%)
Frame = +2
Query: 224 NTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 391
N +S+ A KE +D ++ + + SL A ++ GKAK+ +QQA N+E +DL
Sbjct: 1575 NLQSIANATKEKADKILDSANSVVESLAAA-DESQGKAKDAIQQANSNIELAGQDL 1629
>BT001839-1|AAN71596.1| 241|Drosophila melanogaster RH51979p
protein.
Length = 241
Score = 33.1 bits (72), Expect = 0.16
Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Frame = +2
Query: 203 NAIVNSKNT--ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLER 376
NA+ +K +++NK++K + Q++ + ++ GAL + ++ LQ+A Q +++
Sbjct: 146 NAVDQTKKAANDAINKSVKAAENVADQKLKQAEGAIDGALKQTSQTVEQKLQEANQYVDQ 205
Query: 377 TVEDLRNAHPDVEKQA 424
+ + D QA
Sbjct: 206 KRQSVEKTVQDAAGQA 221
>AY113560-1|AAM29565.1| 86|Drosophila melanogaster RH08410p
protein.
Length = 86
Score = 32.7 bits (71), Expect = 0.21
Identities = 25/81 (30%), Positives = 43/81 (53%)
Frame = +2
Query: 59 AMAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESL 238
A A C ++FA ALA A V R+ N + L K DF + I E+ A+ ++K E L
Sbjct: 2 AKLAICILVFALFALALSARVPREESNPAQEFLTKAQGDFNEFI-EKLKAL-DAKKVEGL 59
Query: 239 NKALKEGSDSMVQQVSELSNS 301
K+G +++ + + +L+ +
Sbjct: 60 ---FKDGLNTVQEGLQKLNET 77
>AE014296-2258|AAF49832.1| 86|Drosophila melanogaster CG11051-PA
protein.
Length = 86
Score = 32.7 bits (71), Expect = 0.21
Identities = 25/81 (30%), Positives = 43/81 (53%)
Frame = +2
Query: 59 AMAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESL 238
A A C ++FA ALA A V R+ N + L K DF + I E+ A+ ++K E L
Sbjct: 2 AKLAICILVFALFALALSARVPREESNPAQEFLTKAQGDFNEFI-EKLKAL-DAKKVEGL 59
Query: 239 NKALKEGSDSMVQQVSELSNS 301
K+G +++ + + +L+ +
Sbjct: 60 ---FKDGLNTVQEGLQKLNET 77
>AY060755-1|AAL28303.1| 230|Drosophila melanogaster GH20817p
protein.
Length = 230
Score = 32.3 bits (70), Expect = 0.28
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +2
Query: 203 NAIVNSKNT--ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLER 376
NA+ +K +++NK++K + Q++ + ++ GAL + + LQ+A Q +++
Sbjct: 135 NAVDQTKKAANDAINKSVKAAENVADQKLKQAEGAIDGALKQTSQTVDQKLQEANQYVDQ 194
Query: 377 TVEDLRNAHPDVEKQA 424
+ + D QA
Sbjct: 195 KRQSVEKTVQDAAGQA 210
>AE013599-924|AAF58901.1| 232|Drosophila melanogaster CG1648-PB,
isoform B protein.
Length = 232
Score = 32.3 bits (70), Expect = 0.28
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +2
Query: 203 NAIVNSKNT--ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLER 376
NA+ +K +++NK++K + Q++ + ++ GAL + + LQ+A Q +++
Sbjct: 137 NAVDQTKKAANDAINKSVKAAENVADQKLKQAEGAIDGALKQTSQTVDQKLQEANQYVDQ 196
Query: 377 TVEDLRNAHPDVEKQA 424
+ + D QA
Sbjct: 197 KRQSVEKTVQDAAGQA 212
>AE013599-923|AAF58898.1| 230|Drosophila melanogaster CG1648-PA,
isoform A protein.
Length = 230
Score = 32.3 bits (70), Expect = 0.28
Identities = 17/76 (22%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +2
Query: 203 NAIVNSKNT--ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLER 376
NA+ +K +++NK++K + Q++ + ++ GAL + + LQ+A Q +++
Sbjct: 135 NAVDQTKKAANDAINKSVKAAENVADQKLKQAEGAIDGALKQTSQTVDQKLQEANQYVDQ 194
Query: 377 TVEDLRNAHPDVEKQA 424
+ + D QA
Sbjct: 195 KRQSVEKTVQDAAGQA 210
>U86404-1|AAB49975.2| 993|Drosophila melanogaster egalitarian
protein.
Length = 993
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 158 EKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 331
+ H Q Q EQFNA+ N+ N+ S+ K V VS + LQ NG
Sbjct: 253 DTHIQQAQAQTREQFNAL-NNNNSASIRKQEPTPGGGGVGGVSSVQQRLQSPALRTNG 309
>BT009999-1|AAQ22468.1| 1004|Drosophila melanogaster RE33408p
protein.
Length = 1004
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 158 EKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 331
+ H Q Q EQFNA+ N+ N+ S+ K V VS + LQ NG
Sbjct: 264 DTHIQQAQAQTREQFNAL-NNNNSASIRKQEPTPGGGGVGGVSSVQQRLQSPALRTNG 320
>AE013599-3677|AAF47054.3| 885|Drosophila melanogaster CG4051-PA
protein.
Length = 885
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +2
Query: 158 EKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 331
+ H Q Q EQFNA+ N+ N+ S+ K V VS + LQ NG
Sbjct: 264 DTHIQQAQAQTREQFNAL-NNNNSASIRKQEPTPGGGGVGGVSSVQQRLQSPALRTNG 320
>AE014134-2054|AAF53089.2| 1931|Drosophila melanogaster CG33694-PA,
isoform A protein.
Length = 1931
Score = 29.9 bits (64), Expect = 1.5
Identities = 26/98 (26%), Positives = 47/98 (47%)
Frame = +2
Query: 125 RDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 304
RD+ L+ K A D KT+ E + NS N + +EG Q++++ +
Sbjct: 1461 RDSEIKQLRSELKDAIDENKTVREAKVGLENSLKAVQENMSAQEG--QFKQKIAD----I 1514
Query: 305 QGALTDANGKAKEVLQQARQNLERTVEDLRNAHPDVEK 418
+G++ + K K LQ+ R +LE E+L+ D ++
Sbjct: 1515 KGSVDELQIKLKS-LQEVRDHLESRNEELKRKLKDAQE 1551
>AY069225-1|AAL39370.1| 287|Drosophila melanogaster GH27237p
protein.
Length = 287
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +2
Query: 305 QGALTDANGKAKEVLQQARQNLERTVEDLRNAHP 406
+GALT + K E+L+QAR + +R VE+LR +P
Sbjct: 169 KGALTTYHHKFLELLEQAR-DAKRQVEELRARYP 201
>AE014298-1296|AAF46459.1| 287|Drosophila melanogaster CG12056-PA
protein.
Length = 287
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +2
Query: 305 QGALTDANGKAKEVLQQARQNLERTVEDLRNAHP 406
+GALT + K E+L+QAR + +R VE+LR +P
Sbjct: 169 KGALTTYHHKFLELLEQAR-DAKRQVEELRARYP 201
>AY070951-1|AAL48573.1| 208|Drosophila melanogaster RE04882p
protein.
Length = 208
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 62 MAAKCFVLFACVALAHGAMVRRDAP 136
MAAK + A A+AHGA++R AP
Sbjct: 1 MAAKIVIALALFAVAHGAVLRTAAP 25
>AE014297-499|AAF54094.1| 208|Drosophila melanogaster CG1330-PA
protein.
Length = 208
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 62 MAAKCFVLFACVALAHGAMVRRDAP 136
MAAK + A A+AHGA++R AP
Sbjct: 1 MAAKIVIALALFAVAHGAVLRTAAP 25
>AE013599-1923|AAF58230.1| 3257|Drosophila melanogaster CG12864-PA,
isoform A protein.
Length = 3257
Score = 29.1 bits (62), Expect = 2.6
Identities = 22/87 (25%), Positives = 38/87 (43%)
Frame = +2
Query: 128 DAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQ 307
D N + + + H + + N I + +T+ + SD + + ELSNSL
Sbjct: 1715 DTDNKLKKKEDDHELEVNDICAASKNPITDD-STKDASSNKSTDSDVLQETKDELSNSLI 1773
Query: 308 GALTDANGKAKEVLQQARQNLERTVED 388
A + KE+ ++ N +TVED
Sbjct: 1774 NATQGEDTPIKELTEEEVPN-NKTVED 1799
>AE001572-17|AAD19807.1| 208|Drosophila melanogaster cuticle
protein protein.
Length = 208
Score = 29.1 bits (62), Expect = 2.6
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +2
Query: 62 MAAKCFVLFACVALAHGAMVRRDAP 136
MAAK + A A+AHGA++R AP
Sbjct: 1 MAAKIVIALALFAVAHGAVLRTAAP 25
>AY122116-1|AAM52628.1| 343|Drosophila melanogaster GH18178p
protein.
Length = 343
Score = 28.7 bits (61), Expect = 3.4
Identities = 32/150 (21%), Positives = 62/150 (41%), Gaps = 11/150 (7%)
Frame = +2
Query: 5 EALADLATSLRTRTDSDTAMAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQK 184
E++ D + +LR + D+ + + AL A+ R NT++ DLE +
Sbjct: 95 ESIVDFSATLRAQIDALHQGIDRVRNILQREALKD-ALARLQTVNTVVNDLEVAVNNLND 153
Query: 185 TISE---QFNAIVNSK-------NTESLNKALK-EGSDSMVQQVSELSNSLQGALTDANG 331
I E ++ AI+ K E ++K G++ + ++EL + G L
Sbjct: 154 RIDEKKQEYFAIIQKKWYQWSDAQLERVDKLTNGVGNEEAEEIINELLSRYSGYLHSCLE 213
Query: 332 KAKEVLQQARQNLERTVEDLRNAHPDVEKQ 421
+ + QN++ +E NA ++ Q
Sbjct: 214 ELQAQQATFEQNVQEAIEKYHNATNELTDQ 243
>AY118377-1|AAM48406.1| 1265|Drosophila melanogaster RE24170p
protein.
Length = 1265
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 242 KALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVED 388
+AL+E + +V+ EL L+ L ANG KEVL++ +E T+ D
Sbjct: 488 EALEEVHEQLVESNHELELDLREELDLANGAKKEVLRERDAAIE-TIYD 535
>AY051730-1|AAK93154.1| 550|Drosophila melanogaster LD25919p
protein.
Length = 550
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = +2
Query: 230 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVE 385
E NKA KE + + +++ E S++GA + ++ KE+ + ++ +R +E
Sbjct: 115 EDRNKA-KEKKEELEKEIEESEASIEGAKSQSSDIKKEIDEITKEENKRNIE 165
>AF186472-1|AAF01416.1| 1409|Drosophila melanogaster condensin subunit
SMC4 protein.
Length = 1409
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = +2
Query: 230 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVE 385
E NKA KE + + +++ E S++GA + ++ KE+ + ++ +R +E
Sbjct: 974 EDRNKA-KEKKEELEKEIEESEASIEGAKSQSSDIKKEIDEITKEENKRNIE 1024
>AE014296-2323|AAF49788.1| 1265|Drosophila melanogaster CG9206-PA
protein.
Length = 1265
Score = 28.7 bits (61), Expect = 3.4
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +2
Query: 242 KALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVED 388
+AL+E + +V+ EL L+ L ANG KEVL++ +E T+ D
Sbjct: 488 EALEEVHEQLVESNHELELDLREELDLANGAKKEVLRERDAAIE-TIYD 535
>AE014134-2761|AAF53560.1| 1409|Drosophila melanogaster CG11397-PA
protein.
Length = 1409
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = +2
Query: 230 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVE 385
E NKA KE + + +++ E S++GA + ++ KE+ + ++ +R +E
Sbjct: 974 EDRNKA-KEKKEELEKEIEESEASIEGAKSQSSDIKKEIDEITKEENKRNIE 1024
>AE014134-2329|AAF53284.1| 341|Drosophila melanogaster CG16826-PA
protein.
Length = 341
Score = 28.7 bits (61), Expect = 3.4
Identities = 32/150 (21%), Positives = 62/150 (41%), Gaps = 11/150 (7%)
Frame = +2
Query: 5 EALADLATSLRTRTDSDTAMAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQK 184
E++ D + +LR + D+ + + AL A+ R NT++ DLE +
Sbjct: 93 ESIVDFSATLRAQIDALHQGIDRVRNILQREALKD-ALARLQTVNTVVNDLEVAVNNLND 151
Query: 185 TISE---QFNAIVNSK-------NTESLNKALK-EGSDSMVQQVSELSNSLQGALTDANG 331
I E ++ AI+ K E ++K G++ + ++EL + G L
Sbjct: 152 RIDEKKQEYFAIIQKKWYQWSDAQLERVDKLTNGVGNEEAEEIINELLSRYSGYLHSCLE 211
Query: 332 KAKEVLQQARQNLERTVEDLRNAHPDVEKQ 421
+ + QN++ +E NA ++ Q
Sbjct: 212 ELQAQQATFEQNVQEAIEKYHNATNELTDQ 241
>X04132-3|CAA27749.1| 455|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 455
Score = 28.3 bits (60), Expect = 4.5
Identities = 18/71 (25%), Positives = 39/71 (54%)
Frame = +2
Query: 164 HAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKE 343
H+ D++K + + + +N E+ K+ K + + Q ++ + Q L ++ + +E
Sbjct: 3 HSMDWEKLVDQ-----IKDQN-ENFRKSYKCLTQNRSTQAVTINRNAQ-VLVNSYNEIRE 55
Query: 344 VLQQARQNLER 376
++QQ R+NLER
Sbjct: 56 LIQQNRKNLER 66
>AF185287-1|AAF13306.1| 1409|Drosophila melanogaster XCAP-C/SMC4
homolog Gluon protein.
Length = 1409
Score = 27.9 bits (59), Expect = 6.0
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = +2
Query: 230 ESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVE 385
E NKA KE + + +++ E S++GA + ++ KE+ + ++ +R +E
Sbjct: 974 EDRNKA-KEKKEELEKEMEESEASIEGAKSQSSDIKKEIDEITKEENKRNIE 1024
>BT023543-1|AAY84943.1| 191|Drosophila melanogaster IP09828p
protein.
Length = 191
Score = 27.5 bits (58), Expect = 7.9
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 170 QDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVL 349
++FQ + + + ESL+ +L Q+ E S SLQ AL + G A L
Sbjct: 27 EEFQTEAIARLEPHLELQPNESLHLSLSRTVVLQYHQIDEFSRSLQSALNSSAGFA-ATL 85
Query: 350 QQAR--QNLERT 379
Q R N ERT
Sbjct: 86 QGLRIYTNEERT 97
>BT023530-1|AAY84930.1| 258|Drosophila melanogaster IP09928p
protein.
Length = 258
Score = 27.5 bits (58), Expect = 7.9
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 170 QDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVL 349
++FQ + + + ESL+ +L Q+ E S SLQ AL + G A L
Sbjct: 94 EEFQTEAIARLEPHLELQPNESLHLSLSRTVVLQYHQIDEFSRSLQSALNSSAGFA-ATL 152
Query: 350 QQAR--QNLERT 379
Q R N ERT
Sbjct: 153 QGLRIYTNEERT 164
>AE014297-973|AAF54405.1| 258|Drosophila melanogaster CG16790-PA
protein.
Length = 258
Score = 27.5 bits (58), Expect = 7.9
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 170 QDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVL 349
++FQ + + + ESL+ +L Q+ E S SLQ AL + G A L
Sbjct: 94 EEFQTEAIARLEPHLELQPNESLHLSLSRTVVLQYHQIDEFSRSLQSALNSSAGFA-ATL 152
Query: 350 QQAR--QNLERT 379
Q R N ERT
Sbjct: 153 QGLRIYTNEERT 164
>AE014134-914|AAF52246.1| 593|Drosophila melanogaster CG12512-PA
protein.
Length = 593
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 329 GKAKEVLQQARQNL-ERTVEDLRNAHPDV 412
G+ KE+L + +N+ + +ED NAHP V
Sbjct: 476 GRLKEMLIRGGENIFPKEIEDFLNAHPQV 504
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,223,560
Number of Sequences: 53049
Number of extensions: 300232
Number of successful extensions: 1399
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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