Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_G03
(425 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 35 0.021
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 35 0.021
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 32 0.20
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 32 0.20
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 32 0.20
Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical pr... 32 0.20
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 32 0.20
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 29 1.1
Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical p... 29 1.4
Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical pr... 29 1.4
AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical ... 29 1.8
Z81560-8|CAN86623.1| 173|Caenorhabditis elegans Hypothetical pr... 28 2.4
Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical pr... 28 2.4
U67953-2|AAL13327.1| 340|Caenorhabditis elegans Hypothetical pr... 28 2.4
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 28 2.4
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 2.4
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 2.4
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 2.4
U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical pr... 28 2.4
AF003389-8|AAC71131.1| 214|Caenorhabditis elegans Hypothetical ... 28 3.2
Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical pr... 27 4.3
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 26 9.8
Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical p... 26 9.8
Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical p... 26 9.8
Z66523-2|CAA91410.1| 451|Caenorhabditis elegans Hypothetical pr... 26 9.8
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 26 9.8
U40427-1|AAA81467.2| 798|Caenorhabditis elegans Hypothetical pr... 26 9.8
U00025-5|AAA50616.1| 170|Caenorhabditis elegans Hypothetical pr... 26 9.8
AL023844-6|CAA19532.1| 551|Caenorhabditis elegans Hypothetical ... 26 9.8
AF003150-4|AAB54217.1| 381|Caenorhabditis elegans Hypothetical ... 26 9.8
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 35.1 bits (77), Expect = 0.021
Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +2
Query: 146 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 325
++DL+K F + ++ + I K+ S+N ++ DS+ +++SE+ +L+
Sbjct: 153 VEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRQNMDSLSEKLSEMDRTLREEQQQK 212
Query: 326 N--GKAKEVLQQARQNLERTVEDLRNAHPDVEKQA 424
+ E L+ A E T+ L++ E+ A
Sbjct: 213 SQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNA 247
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 35.1 bits (77), Expect = 0.021
Identities = 21/95 (22%), Positives = 45/95 (47%), Gaps = 2/95 (2%)
Frame = +2
Query: 146 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 325
++DL+K F + ++ + I K+ S+N ++ DS+ +++SE+ +L+
Sbjct: 153 VEDLQKQVSSFMSQMQDKNSEIQKMKDAISVNDVSRQNMDSLSEKLSEMDRTLREEQQQK 212
Query: 326 N--GKAKEVLQQARQNLERTVEDLRNAHPDVEKQA 424
+ E L+ A E T+ L++ E+ A
Sbjct: 213 SQLRSQTETLKNALSTSESTLSMLKDKLAQFEQNA 247
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 31.9 bits (69), Expect = 0.20
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Frame = +2
Query: 17 DLATSLRTRTDSDTA--MAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQKTI 190
D A +L+ R SD A +A C L + + A A + + LQ+ EK +K +
Sbjct: 402 DNAITLKIRGMSDKARMIAKNCAELQSNLRTAQEAATKIEVEMKTLQN-EK--VKLEKEV 458
Query: 191 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNL 370
+ I +N + K L + +++ + +++L + ALT+ K ++ L+Q
Sbjct: 459 EQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPLLDENALTECKLKREKYLKQLDILK 518
Query: 371 ERTVEDLRNAHPDVEKQA 424
++ E +NA D EK++
Sbjct: 519 KKCAEAEKNAEKDREKES 536
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 31.9 bits (69), Expect = 0.20
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Frame = +2
Query: 17 DLATSLRTRTDSDTA--MAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQKTI 190
D A +L+ R SD A +A C L + + A A + + LQ+ EK +K +
Sbjct: 388 DNAITLKIRGMSDKARMIAKNCAELQSNLRTAQEAATKIEVEMKTLQN-EK--VKLEKEV 444
Query: 191 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNL 370
+ I +N + K L + +++ + +++L + ALT+ K ++ L+Q
Sbjct: 445 EQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPLLDENALTECKLKREKYLKQLDILK 504
Query: 371 ERTVEDLRNAHPDVEKQA 424
++ E +NA D EK++
Sbjct: 505 KKCAEAEKNAEKDREKES 522
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 31.9 bits (69), Expect = 0.20
Identities = 34/138 (24%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Frame = +2
Query: 17 DLATSLRTRTDSDTA--MAAKCFVLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQKTI 190
D A +L+ R SD A +A C L + + A A + + LQ+ EK +K +
Sbjct: 388 DNAITLKIRGMSDKARMIAKNCAELQSNLRTAQEAATKIEVEMKTLQN-EK--VKLEKEV 444
Query: 191 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNL 370
+ I +N + K L + +++ + +++L + ALT+ K ++ L+Q
Sbjct: 445 EQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPLLDENALTECKLKREKYLKQLDILK 504
Query: 371 ERTVEDLRNAHPDVEKQA 424
++ E +NA D EK++
Sbjct: 505 KKCAEAEKNAEKDREKES 522
>Z54238-8|CAA90998.3| 459|Caenorhabditis elegans Hypothetical
protein T28C6.7 protein.
Length = 459
Score = 31.9 bits (69), Expect = 0.20
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +2
Query: 140 TILQDLEKHAQDFQKTISEQFNAIVNSKNTE-SLNKALKEGSDSMVQQVSELSNSLQGAL 316
T L+D+ +D + + E+ + + +S+N E N L++ + ++V +L+ L +
Sbjct: 268 TTLEDINGKYEDERDRLQEEVDTLRSSRNWEIEQNALLRDQVAHLKEKVHKLTTELDASE 327
Query: 317 TDANGKAKEVLQQARQNLERTVEDLRNA 400
+ EV ++++ +E VEDL A
Sbjct: 328 VAKRSLSSEV-DESKKLMELMVEDLLQA 354
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 31.9 bits (69), Expect = 0.20
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Frame = +2
Query: 146 LQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQ---VSELSNSLQGAL 316
L++LE +A+ + + EQ N +K + L K+LK + + V+EL LQ
Sbjct: 111 LKELENNAEALKTQLQEQTNDAKKAK--DELQKSLKSAAARATEATTAVAELQAKLQTVE 168
Query: 317 TDANGK---AKEVLQQARQNLERTVEDLRNAHPDVEK 418
+ + AKE L +QN ER +L+ ++++
Sbjct: 169 KEHKKEIEDAKEALAAEKQNSEREKMELKKLTEELQR 205
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 29.5 bits (63), Expect = 1.1
Identities = 26/117 (22%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Frame = +2
Query: 95 VALAHGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAI------VNSKNTESLNKALKE 256
+A + A D N +L + E+ A+ + + ++ +A K ES+N+ L+E
Sbjct: 1331 IANINRARQLEDEKNALLDEKEE-AEGLRAHLEKEIHAARQGAGEARRKAEESVNQQLEE 1389
Query: 257 GSDSMVQQVSELSNSLQGALTDANG--KAKEVLQQARQNLERTVEDLRNAHPDVEKQ 421
++ V L L+ + ++K+ +QQ ++ +E++R +H D EK+
Sbjct: 1390 LRKKNLRDVEHLQKQLEESEVAKERILQSKKKIQQELEDSSMELENVRASHRDSEKR 1446
>Z83120-1|CAB05583.1| 837|Caenorhabditis elegans Hypothetical
protein R06A4.2 protein.
Length = 837
Score = 29.1 bits (62), Expect = 1.4
Identities = 21/92 (22%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +2
Query: 128 DAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGS--DSMVQQVSELSNS 301
+AP D+E +D +TI + + + +N ++ + KE D + ++++ N+
Sbjct: 526 EAPEHEAMDVEDDDEDLDETIPLESDEQMMDENLDTSVASKKEAMDVDELSNKMTDAVNN 585
Query: 302 LQGALTDANGKAKEVLQQARQNLERTVEDLRN 397
LQ ++T++ + VL+ A + E L+N
Sbjct: 586 LQKSITESTNET-TVLEGAAAAVILLSESLQN 616
>Z83113-10|CAI46598.1| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 29.1 bits (62), Expect = 1.4
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +2
Query: 167 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 340
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 341 EVLQQARQNLERTVEDLRNAHPDVEKQA 424
E A + + ED + + + +QA
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA 194
>Z83113-9|CAB05548.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 29.1 bits (62), Expect = 1.4
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +2
Query: 167 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 340
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 341 EVLQQARQNLERTVEDLRNAHPDVEKQA 424
E A + + ED + + + +QA
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA 194
>Z73975-5|CAA98278.2| 556|Caenorhabditis elegans Hypothetical
protein K08H10.2b protein.
Length = 556
Score = 29.1 bits (62), Expect = 1.4
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +2
Query: 167 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 340
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 341 EVLQQARQNLERTVEDLRNAHPDVEKQA 424
E A + + ED + + + +QA
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA 194
>Z73975-4|CAA98279.2| 497|Caenorhabditis elegans Hypothetical
protein K08H10.2a protein.
Length = 497
Score = 29.1 bits (62), Expect = 1.4
Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +2
Query: 167 AQDFQKTISEQFNAIVNSKN--TESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK 340
A+D+ + ++ + + +S T + +LKE + +L+N + A+ D AK
Sbjct: 107 AKDYVEDAKDKASDVWDSAKDKTSDVFDSLKEHGEDASDSAKDLANDAEDAIKDTYDSAK 166
Query: 341 EVLQQARQNLERTVEDLRNAHPDVEKQA 424
E A + + ED + + + +QA
Sbjct: 167 EKASDAFDSAKEHGEDAQESAKEYFEQA 194
>AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical
protein Y39G10AR.10 protein.
Length = 690
Score = 28.7 bits (61), Expect = 1.8
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Frame = +2
Query: 143 ILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALT- 319
+L + E+ A Q+T SE+ N + +++ + N LKE + + + S Q ALT
Sbjct: 68 MLDEAEEKASSAQETTSEENNLKILNRDLVAENLELKEMKEELRKIWLSDSKKFQEALTR 127
Query: 320 --DANGKAKEVLQQARQNLERTVEDLRNAHPDVEK 418
D N K ++ + + L N + ++EK
Sbjct: 128 ISDENTKLQKDCHELESIRQCAQFALDNCNEELEK 162
>Z81560-8|CAN86623.1| 173|Caenorhabditis elegans Hypothetical
protein K02E2.8b protein.
Length = 173
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 261 PTPWCSRSPSYPTVYRVR*PTQTVKLRKC 347
PT WC+ S S+P ++R R P +T +C
Sbjct: 78 PTDWCAISGSFPIMFR-RYPEETTADAQC 105
>Z81560-7|CAB76737.2| 188|Caenorhabditis elegans Hypothetical
protein K02E2.8a protein.
Length = 188
Score = 28.3 bits (60), Expect = 2.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 261 PTPWCSRSPSYPTVYRVR*PTQTVKLRKC 347
PT WC+ S S+P ++R R P +T +C
Sbjct: 93 PTDWCAISGSFPIMFR-RYPEETTADAQC 120
>U67953-2|AAL13327.1| 340|Caenorhabditis elegans Hypothetical
protein ZC13.1a protein.
Length = 340
Score = 28.3 bits (60), Expect = 2.4
Identities = 19/92 (20%), Positives = 38/92 (41%)
Frame = +2
Query: 125 RDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 304
RD + L H ++ + + NTE N++ + +VS S
Sbjct: 12 RDNLSRSRSSLSAHFPQIPSSMHDGIQSFFGGSNTEYQNQSTSASFPN--DRVSMSSFDE 69
Query: 305 QGALTDANGKAKEVLQQARQNLERTVEDLRNA 400
TDA+G ++ L +++N+ ++ RN+
Sbjct: 70 NHEATDADGNERDQLLGSQRNIRENLQHFRNS 101
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 28.3 bits (60), Expect = 2.4
Identities = 19/92 (20%), Positives = 38/92 (41%)
Frame = +2
Query: 125 RDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 304
RD + L H ++ + + NTE N++ + +VS S
Sbjct: 12 RDNLSRSRSSLSAHFPQIPSSMHDGIQSFFGGSNTEYQNQSTSASFPN--DRVSMSSFDE 69
Query: 305 QGALTDANGKAKEVLQQARQNLERTVEDLRNA 400
TDA+G ++ L +++N+ ++ RN+
Sbjct: 70 NHEATDADGNERDQLLGSQRNIRENLQHFRNS 101
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.3 bits (60), Expect = 2.4
Identities = 21/90 (23%), Positives = 46/90 (51%)
Frame = +2
Query: 152 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 331
DLE+ ++ + +S+ N K + + ++ + + + S++S L+D +
Sbjct: 1099 DLERRIRELEDELSQIGRG--NDKTENDITELKRKHAAEIDKLKSDISALHDKHLSDLDD 1156
Query: 332 KAKEVLQQARQNLERTVEDLRNAHPDVEKQ 421
+ KE +A +NL+ +DLR+ ++EKQ
Sbjct: 1157 E-KEQYGKAVENLKSVEDDLRDKLNNLEKQ 1185
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 2.4
Identities = 21/90 (23%), Positives = 46/90 (51%)
Frame = +2
Query: 152 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 331
DLE+ ++ + +S+ N K + + ++ + + + S++S L+D +
Sbjct: 1172 DLERRIRELEDELSQIGRG--NDKTENDITELKRKHAAEIDKLKSDISALHDKHLSDLDD 1229
Query: 332 KAKEVLQQARQNLERTVEDLRNAHPDVEKQ 421
+ KE +A +NL+ +DLR+ ++EKQ
Sbjct: 1230 E-KEQYGKAVENLKSVEDDLRDKLNNLEKQ 1258
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 2.4
Identities = 21/90 (23%), Positives = 46/90 (51%)
Frame = +2
Query: 152 DLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANG 331
DLE+ ++ + +S+ N K + + ++ + + + S++S L+D +
Sbjct: 1172 DLERRIRELEDELSQIGRG--NDKTENDITELKRKHAAEIDKLKSDISALHDKHLSDLDD 1229
Query: 332 KAKEVLQQARQNLERTVEDLRNAHPDVEKQ 421
+ KE +A +NL+ +DLR+ ++EKQ
Sbjct: 1230 E-KEQYGKAVENLKSVEDDLRDKLNNLEKQ 1258
>U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical
protein F59C12.3 protein.
Length = 519
Score = 28.3 bits (60), Expect = 2.4
Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 11/125 (8%)
Frame = +2
Query: 80 VLFACVALAHGAMVRRDAPNTILQDLEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEG 259
+L +A + + +R+ L + HA + +K ++E + +A E
Sbjct: 262 MLEKALANSQERLAKREKKCEELSAVVAHADELRKQLNEVWEEQHRRDQMVESERAQWEM 321
Query: 260 SDSMVQQVSELSNSLQGAL--TDANGKAKEVLQQAR---------QNLERTVEDLRNAHP 406
+ ++ SL G+L T G +++++ + Q LER V DLR H
Sbjct: 322 EKTQLRMQLNKDTSLTGSLKRTTTPGSTEDLIRMRKSIQSKDDKIQQLERMVNDLRKTHG 381
Query: 407 DVEKQ 421
D +Q
Sbjct: 382 DKTEQ 386
>AF003389-8|AAC71131.1| 214|Caenorhabditis elegans Hypothetical
protein F23H11.1 protein.
Length = 214
Score = 27.9 bits (59), Expect = 3.2
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +2
Query: 248 LKEGSDSMVQQVSELSNSL-QGALTDANGKAKEVLQQARQNLERTVEDLRNAH 403
L E S + + EL+ L Q + D E+LQQ + LE+T DL N H
Sbjct: 71 LSEYHASREKCLVELTEKLHQEFMMDQQKIRSELLQQFKDELEQTRADLENKH 123
>Z68159-8|CAD01080.1| 310|Caenorhabditis elegans Hypothetical
protein C33D9.9 protein.
Length = 310
Score = 27.5 bits (58), Expect = 4.3
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Frame = +2
Query: 188 ISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAK-EVLQQ 355
I+ N + N + + + KALKE + Q+S+L+ LQG L + + + K E LQQ
Sbjct: 250 IASMKNCLKNEE-IQKMQKALKEKDE----QISKLTEQLQGLLINRDKETKVEDLQQ 301
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 26.2 bits (55), Expect = 9.8
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 23/125 (18%)
Frame = +2
Query: 95 VALAHGAMVRRDAPNTI------LQDLEKHAQDFQKT---ISEQF------NAIVNSKNT 229
+AL H DA TI +Q+L+ ++ Q+ I EQF NAI+ S+
Sbjct: 1640 IALDHANRAYADAQKTIKKYMETVQELQFQIEEEQRQKDEIREQFLASEKRNAILQSEKD 1699
Query: 230 ESLNKA-----LKEGSDSMVQQVSELSNSLQG---ALTDANGKAKEVLQQARQNLERTVE 385
E +A + +++ ++ E +N L ALT K + L A LE
Sbjct: 1700 ELAQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIAN 1759
Query: 386 DLRNA 400
+L+NA
Sbjct: 1760 ELKNA 1764
>Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 26.2 bits (55), Expect = 9.8
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 209 IVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKE-VLQQARQNLERTVE 385
I NS+ + + K + + ++SELS LQG L + G+A + ++ Q N E
Sbjct: 278 IQNSERSAEIQK-MHDALREKDLKISELSEKLQGLLINQEGEADDTMIDQDDDNKSTHSE 336
Query: 386 D 388
D
Sbjct: 337 D 337
>Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 26.2 bits (55), Expect = 9.8
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 209 IVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKE-VLQQARQNLERTVE 385
I NS+ + + K + + ++SELS LQG L + G+A + ++ Q N E
Sbjct: 278 IQNSERSAEIQK-MHDALREKDLKISELSEKLQGLLINQEGEADDTMIDQDDDNKSTHSE 336
Query: 386 D 388
D
Sbjct: 337 D 337
>Z66523-2|CAA91410.1| 451|Caenorhabditis elegans Hypothetical
protein M05D6.2 protein.
Length = 451
Score = 26.2 bits (55), Expect = 9.8
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +2
Query: 173 DFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSL 304
DF+KT+ + I N+ + E + L++ + V++ + S L
Sbjct: 290 DFKKTLKDHLIVITNNTDEERIKSDLEKIGEQCVKEAVDTSKKL 333
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 26.2 bits (55), Expect = 9.8
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 23/125 (18%)
Frame = +2
Query: 95 VALAHGAMVRRDAPNTI------LQDLEKHAQDFQKT---ISEQF------NAIVNSKNT 229
+AL H DA TI +Q+L+ ++ Q+ I EQF NAI+ S+
Sbjct: 1640 IALDHANRAYADAQKTIKKYMETVQELQFQIEEEQRQKDEIREQFLASEKRNAILQSEKD 1699
Query: 230 ESLNKA-----LKEGSDSMVQQVSELSNSLQG---ALTDANGKAKEVLQQARQNLERTVE 385
E +A + +++ ++ E +N L ALT K + L A LE
Sbjct: 1700 ELAQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIAN 1759
Query: 386 DLRNA 400
+L+NA
Sbjct: 1760 ELKNA 1764
>U40427-1|AAA81467.2| 798|Caenorhabditis elegans Hypothetical
protein F43C9.3 protein.
Length = 798
Score = 26.2 bits (55), Expect = 9.8
Identities = 12/59 (20%), Positives = 26/59 (44%)
Frame = +2
Query: 215 NSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNLERTVEDL 391
++ N NKAL + + Q++ E+SN ++ A + R+ V+++
Sbjct: 105 SNSNLSKFNKALSMSTSHLTQEIEEISNKRLSMALPSSSAAPFITSLKRRETFTKVDEI 163
>U00025-5|AAA50616.1| 170|Caenorhabditis elegans Hypothetical
protein PAR2.1 protein.
Length = 170
Score = 26.2 bits (55), Expect = 9.8
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +2
Query: 191 SEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGKAKEVLQQARQNL 370
+E+ V K E L+K +K+GS MVQ S + + + ++ Q Q L
Sbjct: 100 TERHAVSVFGKQAEILSKTIKKGSRLMVQGRLHYSGGQKDEQGNRTQRNTYIIAQTVQPL 159
Query: 371 ERTVEDLRNAH 403
R + + H
Sbjct: 160 ARAARENPDQH 170
>AL023844-6|CAA19532.1| 551|Caenorhabditis elegans Hypothetical
protein Y48A6B.8 protein.
Length = 551
Score = 26.2 bits (55), Expect = 9.8
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +2
Query: 152 DLEKHAQD--FQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDA 325
D+ +H Q+ QKT+ EQ + V +++ + +K+G ++ ++ + T
Sbjct: 208 DVFQHLQNRAVQKTMIEQLESAVRNQDVMEMGNVVKKGLENGTLSEIQIEEFCKHT-TRP 266
Query: 326 NGKAKEVLQQARQNLERTVEDLRNA 400
N + +Q RQ+ E E ++ A
Sbjct: 267 NFSILQFVQALRQSTEDEKESIQIA 291
>AF003150-4|AAB54217.1| 381|Caenorhabditis elegans Hypothetical
protein T05E7.5 protein.
Length = 381
Score = 26.2 bits (55), Expect = 9.8
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +2
Query: 155 LEKHAQDFQKTISEQFNAIVNSKNTESLNKALKEGSDSMVQQVSELSNSLQGALTDANGK 334
L+ D QKT E + NS+ S K + DS + ++ + N+L+ + D NG+
Sbjct: 89 LDDERFDHQKTRRE----LANSRLEISDLKGEAKCHDSELNRLYTIINNLEKKVEDLNGE 144
Query: 335 AKEVLQQARQNL 370
++ L++ ++ L
Sbjct: 145 HQKSLEKLKERL 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,620,252
Number of Sequences: 27780
Number of extensions: 150048
Number of successful extensions: 658
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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