Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_F22
         (433 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    29   0.093
AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related ...    24   2.0  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    22   8.1  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    22   8.1  
AF458073-1|AAL68639.1|  166|Anopheles gambiae D7-related 5 prote...    22   8.1  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 28.7 bits (61), Expect = 0.093
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = +2

Query: 290 TWSFTNSTQRAWGVIESGNSALDAIEQGATVCDVEQCDGTVGYGGSPD 433
           +W   NS    W   ESG+  L     GA  CD E      GYG +P+
Sbjct: 317 SWELFNSNDTNWFYSESGDIPLCGNSSGAGQCD-EGYICLQGYGKNPN 363


>AF457549-1|AAL68779.1|  257|Anopheles gambiae antigen 5-related 2
           protein protein.
          Length = 257

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 414 PTVPSHCSTSQTVAP 370
           PT+P  CS S+T+ P
Sbjct: 240 PTLPGLCSVSETIKP 254


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 95  PKIASKKCYICIHLQNRIITLFYITDA 175
           PKI     YI +  +NRII    I DA
Sbjct: 307 PKITDYAQYIPVGTENRIIITPKINDA 333


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 95  PKIASKKCYICIHLQNRIITLFYITDA 175
           PKI     YI +  +NRII    I DA
Sbjct: 307 PKITDYAQYIPVGTENRIIITPKINDA 333


>AF458073-1|AAL68639.1|  166|Anopheles gambiae D7-related 5 protein
           protein.
          Length = 166

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -1

Query: 217 VKYHDECYTSRLQVCIRNVK 158
           V+ HD  YT  + VC+   K
Sbjct: 84  VETHDGVYTDAVDVCLSKAK 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,440
Number of Sequences: 2352
Number of extensions: 8445
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35717724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)