Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_F21
         (461 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061348-1|AAL28896.1|  501|Drosophila melanogaster LD27917p pro...    29   2.3  
AE014297-54|AAF52147.3|  501|Drosophila melanogaster CG9795-PA, ...    29   2.3  
AE014297-53|AAN13303.2|  652|Drosophila melanogaster CG9795-PB, ...    29   2.3  
AE014297-52|AAX52940.1|  699|Drosophila melanogaster CG9795-PD, ...    29   2.3  
AE014297-51|AAO41508.1|  689|Drosophila melanogaster CG9795-PC, ...    29   2.3  

>AY061348-1|AAL28896.1|  501|Drosophila melanogaster LD27917p
           protein.
          Length = 501

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 459 NSTPQCKIKGNTVNKVRSVESINVSSWQSNTGAPNRIIPIKKQN 328
           N TP  +I  +    VRS  S  ++S Q N G P  ++P KK +
Sbjct: 437 NLTPHSQIPKSEKQAVRSPPSFALASDQINPGIPPPLLPRKKDH 480


>AE014297-54|AAF52147.3|  501|Drosophila melanogaster CG9795-PA,
           isoform A protein.
          Length = 501

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 459 NSTPQCKIKGNTVNKVRSVESINVSSWQSNTGAPNRIIPIKKQN 328
           N TP  +I  +    VRS  S  ++S Q N G P  ++P KK +
Sbjct: 437 NLTPHSQIPKSEKQAVRSPPSFALASDQINPGIPPPLLPRKKDH 480


>AE014297-53|AAN13303.2|  652|Drosophila melanogaster CG9795-PB,
           isoform B protein.
          Length = 652

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 459 NSTPQCKIKGNTVNKVRSVESINVSSWQSNTGAPNRIIPIKKQN 328
           N TP  +I  +    VRS  S  ++S Q N G P  ++P KK +
Sbjct: 588 NLTPHSQIPKSEKQAVRSPPSFALASDQINPGIPPPLLPRKKDH 631


>AE014297-52|AAX52940.1|  699|Drosophila melanogaster CG9795-PD,
           isoform D protein.
          Length = 699

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 459 NSTPQCKIKGNTVNKVRSVESINVSSWQSNTGAPNRIIPIKKQN 328
           N TP  +I  +    VRS  S  ++S Q N G P  ++P KK +
Sbjct: 588 NLTPHSQIPKSEKQAVRSPPSFALASDQINPGIPPPLLPRKKDH 631


>AE014297-51|AAO41508.1|  689|Drosophila melanogaster CG9795-PC,
           isoform C protein.
          Length = 689

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = -3

Query: 459 NSTPQCKIKGNTVNKVRSVESINVSSWQSNTGAPNRIIPIKKQN 328
           N TP  +I  +    VRS  S  ++S Q N G P  ++P KK +
Sbjct: 625 NLTPHSQIPKSEKQAVRSPPSFALASDQINPGIPPPLLPRKKDH 668


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,117,053
Number of Sequences: 53049
Number of extensions: 322732
Number of successful extensions: 677
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)