Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_F16
         (379 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8I2K6 Cluster: Putative uncharacterized protein PFI150...    35   0.44 
UniRef50_Q8I4U7 Cluster: Putative uncharacterized protein; n=21;...    32   4.1  
UniRef50_Q1EVW4 Cluster: Binding-protein-dependent transport sys...    31   7.1  
UniRef50_Q2LTE6 Cluster: Sensor protein; n=1; Syntrophus aciditr...    31   9.4  
UniRef50_Q68FK4 Cluster: Armadillo repeat-containing protein 8; ...    31   9.4  

>UniRef50_Q8I2K6 Cluster: Putative uncharacterized protein PFI1500w;
            n=2; cellular organisms|Rep: Putative uncharacterized
            protein PFI1500w - Plasmodium falciparum (isolate 3D7)
          Length = 4530

 Score = 35.1 bits (77), Expect = 0.44
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = +2

Query: 98   RYYFKYISRNDQHSNTYITYKYTVLNKSYVI*I*ESIKSPYFFQ 229
            + Y KYIS N Q  N    Y Y  +    VI I  S  SPYF +
Sbjct: 1601 KMYVKYISLNKQMQNKETVYYYKWIKSKIVIDIRNSFSSPYFIR 1644


>UniRef50_Q8I4U7 Cluster: Putative uncharacterized protein; n=21;
            Eukaryota|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 1989

 Score = 31.9 bits (69), Expect = 4.1
 Identities = 11/24 (45%), Positives = 18/24 (75%)
 Frame = -2

Query: 357  YRDISIGSHTRNNNNNHFEYVKLD 286
            +RD+ + S+  NNNNN+  YVK++
Sbjct: 1855 FRDLQLNSNNNNNNNNNNNYVKVN 1878


>UniRef50_Q1EVW4 Cluster: Binding-protein-dependent transport
           systems inner membrane component; n=1; Clostridium
           oremlandii OhILAs|Rep: Binding-protein-dependent
           transport systems inner membrane component - Clostridium
           oremlandii OhILAs
          Length = 797

 Score = 31.1 bits (67), Expect = 7.1
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = +1

Query: 184 RDLNMRVDKKSILFPNIRPYFPLFYSIFDNIYLKI 288
           +D++  +  K + F +  PY   FY+I +N+YLKI
Sbjct: 720 KDIHKGLKGKKVKFVSRSPYSQSFYNIGENLYLKI 754


>UniRef50_Q2LTE6 Cluster: Sensor protein; n=1; Syntrophus
           aciditrophicus SB|Rep: Sensor protein - Syntrophus
           aciditrophicus (strain SB)
          Length = 576

 Score = 30.7 bits (66), Expect = 9.4
 Identities = 17/44 (38%), Positives = 26/44 (59%)
 Frame = +1

Query: 208 KKSILFPNIRPYFPLFYSIFDNIYLKIQLYVFEMIVIIVSSMRA 339
           K++ L+P IR  FP FYS+    Y+   +YVF + V+  S + A
Sbjct: 42  KQTSLYPEIR--FPSFYSLILTTYIISFIYVFLLKVVKNSHLHA 83


>UniRef50_Q68FK4 Cluster: Armadillo repeat-containing protein 8;
           n=3; Tetrapoda|Rep: Armadillo repeat-containing protein
           8 - Xenopus laevis (African clawed frog)
          Length = 720

 Score = 30.7 bits (66), Expect = 9.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -3

Query: 200 LIFKSRKIYLRLYICR*YMYCCVG 129
           ++  SR IY + YIC+ Y +CC G
Sbjct: 154 MLLLSRSIYAQEYICQIYAHCCKG 177


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 357,050,674
Number of Sequences: 1657284
Number of extensions: 6896940
Number of successful extensions: 19725
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19605
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14444021678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)