Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_F12
         (424 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   0.92 
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   2.8  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   2.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   2.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   2.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   3.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   4.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   6.5  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   6.5  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 0.92
 Identities = 13/60 (21%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
 Frame = -2

Query: 177 NLAFPCLSVFKVCL*PKQYLPDFITRARRELIDSMVFFCF----FAATIMIAVFYSDPHR 10
           +LA+  + ++ +C+  ++ + DF+ R   E   + + F +    +  T MI + Y + +R
Sbjct: 124 HLAYGVVIIYSICVQTEKSVFDFLCRHTVEYFQNYIHFFYQLLLYLITDMILMRYKELNR 183


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +1

Query: 40  HNGCSKETEK 69
           H+GCSK TEK
Sbjct: 72  HSGCSKCTEK 81


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 57  RNRKRPSSLLIPVWLWL*SLANT 125
           RN    SS +  +W+WL +++ T
Sbjct: 120 RNPIHTSSYMTGIWVWLINISAT 142


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 57  RNRKRPSSLLIPVWLWL*SLANT 125
           RN    SS +  +W+WL +++ T
Sbjct: 353 RNPIHTSSYMTGIWVWLINISAT 375


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 57  RNRKRPSSLLIPVWLWL*SLANT 125
           RN    SS +  +W+WL +++ T
Sbjct: 353 RNPIHTSSYMTGIWVWLINISAT 375


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 310 QSMYSSNHRPWRF*HHN 360
           Q++Y  NHRPW+  H N
Sbjct: 529 QTVY--NHRPWQQLHLN 543


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 84  IDSMVFFCFFAATIMIAVFY 25
           I+S+ +FC  A  +   +FY
Sbjct: 379 INSIQYFCLMARCLNTLIFY 398


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 66  FCFFAATIMIAVF 28
           FCF+   +M+A+F
Sbjct: 326 FCFYWLLVMVAMF 338


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 66  FCFFAATIMIAVF 28
           FCF+   +M+A+F
Sbjct: 282 FCFYWLLVMVAMF 294


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,474
Number of Sequences: 336
Number of extensions: 2094
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9384961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)