Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_F12
(424 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79238-1|CAA55820.1| 115|Homo sapiens ribosomal protein L30 pro... 202 4e-52
L05095-1|AAC15858.1| 115|Homo sapiens ribosomal protein L30 pro... 202 4e-52
BC095426-1|AAH95426.1| 115|Homo sapiens ribosomal protein L30 p... 202 4e-52
BC032700-1|AAH32700.1| 115|Homo sapiens ribosomal protein L30 p... 202 4e-52
AB070559-1|BAB79491.1| 115|Homo sapiens ribosomal protein L30 p... 202 4e-52
X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein. 34 0.23
U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor... 34 0.23
BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation ... 34 0.23
BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation ... 34 0.23
BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein. 34 0.23
AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein. 34 0.23
EF638437-1|ABR22588.1| 86|Homo sapiens human factor FVIII prot... 29 4.9
EF638436-1|ABR22587.1| 86|Homo sapiens human factor FVIII prot... 29 4.9
>X79238-1|CAA55820.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 202 bits (493), Expect = 4e-52
Identities = 95/112 (84%), Positives = 102/112 (91%)
Frame = +2
Query: 44 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEI 223
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 224 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEAT 379
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE T
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPEQT 112
>L05095-1|AAC15858.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 202 bits (493), Expect = 4e-52
Identities = 95/112 (84%), Positives = 102/112 (91%)
Frame = +2
Query: 44 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEI 223
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 224 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEAT 379
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE T
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPEQT 112
>BC095426-1|AAH95426.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 202 bits (493), Expect = 4e-52
Identities = 95/112 (84%), Positives = 102/112 (91%)
Frame = +2
Query: 44 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEI 223
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 224 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEAT 379
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE T
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPEQT 112
>BC032700-1|AAH32700.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 202 bits (493), Expect = 4e-52
Identities = 95/112 (84%), Positives = 102/112 (91%)
Frame = +2
Query: 44 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEI 223
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 224 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEAT 379
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE T
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPEQT 112
>AB070559-1|BAB79491.1| 115|Homo sapiens ribosomal protein L30
protein.
Length = 115
Score = 202 bits (493), Expect = 4e-52
Identities = 95/112 (84%), Positives = 102/112 (91%)
Frame = +2
Query: 44 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEI 223
MVAAKK KK++ESINSRL LVMKSGKY LGYKQTLK +RQGKAKLVI+A N P LRKSEI
Sbjct: 1 MVAAKKTKKSLESINSRLQLVMKSGKYVLGYKQTLKMIRQGKAKLVILANNCPALRKSEI 60
Query: 224 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEAT 379
EYYA+LAKTGVHHYSGNNIELGTACGKYYRVCTLAI DPGDSDII ++PE T
Sbjct: 61 EYYAMLAKTGVHHYSGNNIELGTACGKYYRVCTLAIIDPGDSDIIRSMPEQT 112
>X81625-1|CAA57281.1| 437|Homo sapiens C11 protein protein.
Length = 437
Score = 33.9 bits (74), Expect = 0.23
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 113 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLR 211
+GKYC G + TLK L G +++I+ N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>U90176-1|AAB49726.1| 437|Homo sapiens eukaryotic release factor 1
protein.
Length = 437
Score = 33.9 bits (74), Expect = 0.23
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 113 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLR 211
+GKYC G + TLK L G +++I+ N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>BT007374-1|AAP36038.1| 404|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 404
Score = 33.9 bits (74), Expect = 0.23
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 113 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLR 211
+GKYC G + TLK L G +++I+ N +R
Sbjct: 265 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 297
>BC088358-1|AAH88358.1| 437|Homo sapiens eukaryotic translation
termination factor 1 protein.
Length = 437
Score = 33.9 bits (74), Expect = 0.23
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 113 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLR 211
+GKYC G + TLK L G +++I+ N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>BC014269-1|AAH14269.1| 404|Homo sapiens ETF1 protein protein.
Length = 404
Score = 33.9 bits (74), Expect = 0.23
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 113 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLR 211
+GKYC G + TLK L G +++I+ N +R
Sbjct: 265 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 297
>AF095901-1|AAD43966.1| 437|Homo sapiens eRF1 protein.
Length = 437
Score = 33.9 bits (74), Expect = 0.23
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 113 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLR 211
+GKYC G + TLK L G +++I+ N +R
Sbjct: 298 TGKYCFGVEDTLKALEMGAVEILIVYENLDIMR 330
>EF638437-1|ABR22588.1| 86|Homo sapiens human factor FVIII
protein.
Length = 86
Score = 29.5 bits (63), Expect = 4.9
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 25 VENCYHNGCSKETEKDHRVY*FPSGSGYEVWQIL 126
+ +CY + S+ ++D +V FP GS VWQ+L
Sbjct: 1 LRSCYDDQTSQREKEDDKV--FPGGSHTYVWQVL 32
>EF638436-1|ABR22587.1| 86|Homo sapiens human factor FVIII
protein.
Length = 86
Score = 29.5 bits (63), Expect = 4.9
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 25 VENCYHNGCSKETEKDHRVY*FPSGSGYEVWQIL 126
+ +CY + S+ ++D +V FP GS VWQ+L
Sbjct: 1 LRSCYDDQTSQREKEDDKV--FPGGSHTYVWQVL 32
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,152,641
Number of Sequences: 237096
Number of extensions: 1241870
Number of successful extensions: 2414
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2414
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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