Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_F12
         (424 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071208-1|AAL48830.1|  111|Drosophila melanogaster RE25263p pro...   194   4e-50
AE014134-3014|AAN11021.1|  111|Drosophila melanogaster CG10652-P...   194   4e-50
AE014134-3013|AAF53738.1|  111|Drosophila melanogaster CG10652-P...   194   4e-50
AY118425-1|AAM48454.1|  111|Drosophila melanogaster RH09938p pro...   192   2e-49
AY069511-1|AAL39656.1|  438|Drosophila melanogaster LD23157p pro...    29   2.6  
AE014296-3335|AAO41278.1|  438|Drosophila melanogaster CG5605-PG...    29   2.6  
AE014296-3334|AAN12123.1|  438|Drosophila melanogaster CG5605-PF...    29   2.6  
AE014296-3333|AAN12122.1|  438|Drosophila melanogaster CG5605-PE...    29   2.6  
AE014296-3332|AAN12121.1|  438|Drosophila melanogaster CG5605-PC...    29   2.6  
AE014296-3331|AAF51575.2|  438|Drosophila melanogaster CG5605-PB...    29   2.6  
AE014296-3330|AAF51574.2|  438|Drosophila melanogaster CG5605-PA...    29   2.6  
M23391-1|AAA28487.1|  868|Drosophila melanogaster DNA-binding pr...    28   5.9  
BT003500-1|AAO39504.1| 1169|Drosophila melanogaster RE45036p pro...    27   7.8  
AE013599-158|AAF57274.2| 1169|Drosophila melanogaster CG11212-PA...    27   7.8  

>AY071208-1|AAL48830.1|  111|Drosophila melanogaster RE25263p
           protein.
          Length = 111

 Score =  194 bits (473), Expect = 4e-50
 Identities = 92/111 (82%), Positives = 99/111 (89%)
 Frame = +2

Query: 44  MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEI 223
           MVA KKQKK +ES N+RLALVMKSGKYCLGYKQTLKTLRQGKAKLV+IA N P LRKSEI
Sbjct: 1   MVAVKKQKKALESTNARLALVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEI 60

Query: 224 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEA 376
           EYYA+LAKT V HYSG NIELGTACGKY+RVCTL+ITDPGDSDII +L  A
Sbjct: 61  EYYAMLAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSLETA 111


>AE014134-3014|AAN11021.1|  111|Drosophila melanogaster CG10652-PB,
           isoform B protein.
          Length = 111

 Score =  194 bits (473), Expect = 4e-50
 Identities = 92/111 (82%), Positives = 99/111 (89%)
 Frame = +2

Query: 44  MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEI 223
           MVA KKQKK +ES N+RLALVMKSGKYCLGYKQTLKTLRQGKAKLV+IA N P LRKSEI
Sbjct: 1   MVAVKKQKKALESTNARLALVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEI 60

Query: 224 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEA 376
           EYYA+LAKT V HYSG NIELGTACGKY+RVCTL+ITDPGDSDII +L  A
Sbjct: 61  EYYAMLAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSLETA 111


>AE014134-3013|AAF53738.1|  111|Drosophila melanogaster CG10652-PA,
           isoform A protein.
          Length = 111

 Score =  194 bits (473), Expect = 4e-50
 Identities = 92/111 (82%), Positives = 99/111 (89%)
 Frame = +2

Query: 44  MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEI 223
           MVA KKQKK +ES N+RLALVMKSGKYCLGYKQTLKTLRQGKAKLV+IA N P LRKSEI
Sbjct: 1   MVAVKKQKKALESTNARLALVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEI 60

Query: 224 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEA 376
           EYYA+LAKT V HYSG NIELGTACGKY+RVCTL+ITDPGDSDII +L  A
Sbjct: 61  EYYAMLAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSLETA 111


>AY118425-1|AAM48454.1|  111|Drosophila melanogaster RH09938p
           protein.
          Length = 111

 Score =  192 bits (468), Expect = 2e-49
 Identities = 91/111 (81%), Positives = 98/111 (88%)
 Frame = +2

Query: 44  MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEI 223
           MVA KKQKK +ES N+RL LVMKSGKYCLGYKQTLKTLRQGKAKLV+IA N P LRKSEI
Sbjct: 1   MVAVKKQKKALESTNARLELVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEI 60

Query: 224 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEA 376
           EYYA+LAKT V HYSG NIELGTACGKY+RVCTL+ITDPGDSDII +L  A
Sbjct: 61  EYYAMLAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSLETA 111


>AY069511-1|AAL39656.1|  438|Drosophila melanogaster LD23157p
           protein.
          Length = 438

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 113 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHH 262
           +GKYC G + TL+ L  G  + +I   N   +++  ++ +A    T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346


>AE014296-3335|AAO41278.1|  438|Drosophila melanogaster CG5605-PG,
           isoform G protein.
          Length = 438

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 113 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHH 262
           +GKYC G + TL+ L  G  + +I   N   +++  ++ +A    T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346


>AE014296-3334|AAN12123.1|  438|Drosophila melanogaster CG5605-PF,
           isoform F protein.
          Length = 438

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 113 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHH 262
           +GKYC G + TL+ L  G  + +I   N   +++  ++ +A    T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346


>AE014296-3333|AAN12122.1|  438|Drosophila melanogaster CG5605-PE,
           isoform E protein.
          Length = 438

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 113 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHH 262
           +GKYC G + TL+ L  G  + +I   N   +++  ++ +A    T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346


>AE014296-3332|AAN12121.1|  438|Drosophila melanogaster CG5605-PC,
           isoform C protein.
          Length = 438

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 113 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHH 262
           +GKYC G + TL+ L  G  + +I   N   +++  ++ +A    T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346


>AE014296-3331|AAF51575.2|  438|Drosophila melanogaster CG5605-PB,
           isoform B protein.
          Length = 438

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 113 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHH 262
           +GKYC G + TL+ L  G  + +I   N   +++  ++ +A    T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346


>AE014296-3330|AAF51574.2|  438|Drosophila melanogaster CG5605-PA,
           isoform A protein.
          Length = 438

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +2

Query: 113 SGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKTGVHH 262
           +GKYC G + TL+ L  G  + +I   N   +++  ++ +A    T V H
Sbjct: 298 TGKYCFGVEDTLRALELGSVETLICWENL-DIQRYVLKNHANSTSTTVLH 346


>M23391-1|AAA28487.1|  868|Drosophila melanogaster DNA-binding
           protein protein.
          Length = 868

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 190 QECASSEEVGDRILCSPSQNRCPPLQ 267
           Q+  S+E V DR+ C P+ +   PL+
Sbjct: 236 QQAKSAESVADRLACRPAASETKPLE 261


>BT003500-1|AAO39504.1| 1169|Drosophila melanogaster RE45036p protein.
          Length = 1169

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 127  LGLQTNFEDTQTRES*VGDHRQECASSEE 213
            LGL T+ ED+    S    HRQ+ A++EE
Sbjct: 925  LGLGTSGEDSSESSSSRSQHRQQAAATEE 953


>AE013599-158|AAF57274.2| 1169|Drosophila melanogaster CG11212-PA
            protein.
          Length = 1169

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 127  LGLQTNFEDTQTRES*VGDHRQECASSEE 213
            LGL T+ ED+    S    HRQ+ A++EE
Sbjct: 925  LGLGTSGEDSSESSSSRSQHRQQAAATEE 953


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,780,547
Number of Sequences: 53049
Number of extensions: 376509
Number of successful extensions: 843
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1292733852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)