Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_F12
(424 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032631-5|CAA21573.1| 113|Caenorhabditis elegans Hypothetical ... 179 9e-46
L17337-6|AAA28221.2| 44|Caenorhabditis elegans Hypothetical pr... 31 0.45
Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical pr... 29 1.8
AL032633-2|CAA21595.2| 428|Caenorhabditis elegans Hypothetical ... 28 3.2
Z81030-11|CAE17704.1| 100|Caenorhabditis elegans Hypothetical p... 27 5.5
U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un... 27 5.5
AF016655-4|AAY55854.1| 144|Caenorhabditis elegans Hypothetical ... 27 7.3
Z70285-2|CAA94289.2| 183|Caenorhabditis elegans Hypothetical pr... 26 9.7
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 26 9.7
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr... 26 9.7
>AL032631-5|CAA21573.1| 113|Caenorhabditis elegans Hypothetical
protein Y106G6H.3 protein.
Length = 113
Score = 179 bits (435), Expect = 9e-46
Identities = 82/113 (72%), Positives = 97/113 (85%)
Frame = +2
Query: 44 MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIARNAPPLRKSEI 223
M A K +K E+INSRL++VMK+G+Y LGYKQTLK+L GKAKLVIIA N PPLRKSEI
Sbjct: 1 MAPAAKPQKNAENINSRLSMVMKTGQYVLGYKQTLKSLLNGKAKLVIIANNTPPLRKSEI 60
Query: 224 EYYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSDIITTLPEATA 382
EYYA+LAKTGVHHY+GNNIELGTACG+ +RVCTLA+TD GDSDII ++P +A
Sbjct: 61 EYYAMLAKTGVHHYNGNNIELGTACGRLFRVCTLAVTDAGDSDIILSVPSESA 113
>L17337-6|AAA28221.2| 44|Caenorhabditis elegans Hypothetical
protein ZK686.1 protein.
Length = 44
Score = 30.7 bits (66), Expect = 0.45
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2
Query: 101 LVMKSGKYCLGYKQTLKTLRQGKAKLVI 184
+VMK+G+Y L Y+Q LK+L AKLVI
Sbjct: 1 MVMKTGQYVL-YEQKLKSLLNENAKLVI 27
>Z71186-8|CAA94917.2| 1322|Caenorhabditis elegans Hypothetical
protein F23D12.2 protein.
Length = 1322
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 199 ASSEEVGDRILCSPSQNRCPPLQ 267
+S+E+VG +LC P Q PPL+
Sbjct: 344 SSTEDVGITVLCVPHQELIPPLE 366
>AL032633-2|CAA21595.2| 428|Caenorhabditis elegans Hypothetical
protein Y106G6A.2a protein.
Length = 428
Score = 27.9 bits (59), Expect = 3.2
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -2
Query: 192 LAMITNLAFP-CLSVFKVCL*PKQYLPDFITRARRELIDSMVFFCFFAATIMIAVFYSDP 16
L++I N P LS +C+ +++ + + R L D++++ C F + Y+DP
Sbjct: 312 LSVIFNFRPPETLSHHDLCI-RERWTKESLNRDWSTLCDAVIYLCIFIGMSHTKLKYTDP 370
Query: 15 H 13
H
Sbjct: 371 H 371
>Z81030-11|CAE17704.1| 100|Caenorhabditis elegans Hypothetical
protein C01G10.15 protein.
Length = 100
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 31 NCYHNGCSKETEKDHRVY*FPSGS-GYEVWQILLG 132
N Y+NGCS + + Y +PS S GY + + G
Sbjct: 64 NGYNNGCSGCSNNNGYTYYYPSNSNGYTTYYLTYG 98
>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 6 protein.
Length = 2098
Score = 27.1 bits (57), Expect = 5.5
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 227 YYALLAKTGVHHYSGNNIELGTACGKYYRVCTLAITDPGDSD 352
+Y LLA G+ + +ELGTA YY + +T G D
Sbjct: 252 FYCLLA--GLSREEKSELELGTAADYYYLIQGKTLTAEGRDD 291
>AF016655-4|AAY55854.1| 144|Caenorhabditis elegans Hypothetical
protein C17F4.11 protein.
Length = 144
Score = 26.6 bits (56), Expect = 7.3
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = +2
Query: 146 LKTLRQGKAKLVIIARNAPPLRKSEIEYYALLAKT-GVHHYSGNNIELGTACGKYYRVCT 322
L+T L II P+ + Y + KT GV HY GN +L + K+ R
Sbjct: 15 LRTYENSNQLLQIIVNARKPVL---VFGYPVSNKTKGVVHYEGNEFDLRSFLKKFNRQME 71
Query: 323 LAITDPGDSDIITTLPEA 376
+ + +D + TL A
Sbjct: 72 IFFKESESNDWLFTLYNA 89
>Z70285-2|CAA94289.2| 183|Caenorhabditis elegans Hypothetical
protein F56C4.2 protein.
Length = 183
Score = 26.2 bits (55), Expect = 9.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3
Query: 302 FRKQYRAQYCFHCSGGHLFWLGEHNILSPT 213
FR YR YCF+ S + + H + +PT
Sbjct: 79 FRFYYRRSYCFYNSRCYSLTMSCHPVATPT 108
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 196 CASSEEVGDRILCSPSQNRCPPLQWKQ 276
C + EE D CSP N+C ++ Q
Sbjct: 475 CQNEEECVDHSYCSPETNKCECMKASQ 501
>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
protein F48E3.8b protein.
Length = 1299
Score = 26.2 bits (55), Expect = 9.7
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 196 CASSEEVGDRILCSPSQNRCPPLQWKQ 276
C + EE D CSP N+C ++ Q
Sbjct: 475 CQNEEECVDHSYCSPETNKCECMKASQ 501
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,567,114
Number of Sequences: 27780
Number of extensions: 197214
Number of successful extensions: 497
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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