Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_F11
(531 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 267 2e-71
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 267 2e-71
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 267 2e-71
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 267 2e-71
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 267 2e-71
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 267 2e-71
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 267 2e-71
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 267 2e-71
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 267 2e-71
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 255 8e-68
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 159 7e-39
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 126 5e-29
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 47 5e-05
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 47 5e-05
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 47 5e-05
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 47 5e-05
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 47 5e-05
BC101517-1|AAI01518.1| 637|Homo sapiens RAB11 family interactin... 30 4.4
BC093914-1|AAH93914.1| 637|Homo sapiens RAB11 family interactin... 30 4.4
AY169244-1|AAO21970.1| 637|Homo sapiens rab11-family interactin... 30 4.4
AL831830-1|CAD38543.1| 296|Homo sapiens hypothetical protein pr... 30 4.4
AK097424-1|BAC05045.1| 535|Homo sapiens protein ( Homo sapiens ... 30 4.4
AJ314646-1|CAC44535.1| 609|Homo sapiens hypothetical protein pr... 30 4.4
AB058724-1|BAB47450.1| 609|Homo sapiens KIAA1821 protein protein. 30 4.4
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 267 bits (654), Expect = 2e-71
Identities = 129/156 (82%), Positives = 139/156 (89%)
Frame = +1
Query: 64 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 243
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 244 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFNAGLAKSIHHAR 423
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVF GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 424 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKS 531
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRS 163
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 267 bits (654), Expect = 2e-71
Identities = 129/156 (82%), Positives = 139/156 (89%)
Frame = +1
Query: 64 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 243
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 244 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFNAGLAKSIHHAR 423
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVF GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 424 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKS 531
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRS 163
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 267 bits (654), Expect = 2e-71
Identities = 129/156 (82%), Positives = 139/156 (89%)
Frame = +1
Query: 64 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 243
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 244 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFNAGLAKSIHHAR 423
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVF GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 424 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKS 531
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRS 163
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 267 bits (654), Expect = 2e-71
Identities = 129/156 (82%), Positives = 139/156 (89%)
Frame = +1
Query: 64 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 243
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 244 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFNAGLAKSIHHAR 423
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVF GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 424 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKS 531
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRS 163
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 267 bits (654), Expect = 2e-71
Identities = 129/156 (82%), Positives = 139/156 (89%)
Frame = +1
Query: 64 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 243
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 244 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFNAGLAKSIHHAR 423
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVF GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 424 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKS 531
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRS 163
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 267 bits (654), Expect = 2e-71
Identities = 129/156 (82%), Positives = 139/156 (89%)
Frame = +1
Query: 64 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 243
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 244 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFNAGLAKSIHHAR 423
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVF GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 424 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKS 531
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRS 163
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 267 bits (654), Expect = 2e-71
Identities = 129/156 (82%), Positives = 139/156 (89%)
Frame = +1
Query: 64 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 243
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 244 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFNAGLAKSIHHAR 423
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVF GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 424 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKS 531
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRS 163
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 267 bits (654), Expect = 2e-71
Identities = 129/156 (82%), Positives = 139/156 (89%)
Frame = +1
Query: 64 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 243
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 244 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFNAGLAKSIHHAR 423
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVF GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 424 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKS 531
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRS 163
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 267 bits (654), Expect = 2e-71
Identities = 129/156 (82%), Positives = 139/156 (89%)
Frame = +1
Query: 64 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 243
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 244 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFNAGLAKSIHHAR 423
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVF GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 424 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKS 531
+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 128 VLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRS 163
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 255 bits (624), Expect = 8e-68
Identities = 125/156 (80%), Positives = 135/156 (86%)
Frame = +1
Query: 64 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 243
V KTYVTPRR FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRKAARELLTL++KD
Sbjct: 8 VCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKD 67
Query: 244 PKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFNAGLAKSIHHAR 423
P+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVF GLAKSIHHAR
Sbjct: 68 PRRLFEGNALLWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHAR 127
Query: 424 ILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKS 531
+LIRQRH RVRKQVVNIPSFIVRLDS KHIDFSL S
Sbjct: 128 VLIRQRHFRVRKQVVNIPSFIVRLDSQKHIDFSLCS 163
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 159 bits (385), Expect = 7e-39
Identities = 77/98 (78%), Positives = 83/98 (84%)
Frame = +1
Query: 238 KDPKRLFEGNAXXXXXXXXXXXDEKQMKLDYVLGLKIEDFLERRLQTQVFNAGLAKSIHH 417
+DP+RLFEGNA DE +MKLDY+LGLKIEDFLERRLQTQVF GLAKSIHH
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 64
Query: 418 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKS 531
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+S
Sbjct: 65 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRS 102
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 126 bits (304), Expect = 5e-29
Identities = 57/63 (90%), Positives = 63/63 (100%)
Frame = +1
Query: 73 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 252
KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+R
Sbjct: 2 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 61
Query: 253 LFE 261
LFE
Sbjct: 62 LFE 64
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 46.8 bits (106), Expect = 5e-05
Identities = 31/122 (25%), Positives = 53/122 (43%)
Frame = +1
Query: 124 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXXX 303
EL+++ Y L+ + + R +R+ AR L L E+D R+ +A
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 304 DEKQMKLDYVLGLKIEDFLERRLQTQVFNAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 483
+ L+ + F RRL T + +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 484 IV 489
+V
Sbjct: 149 LV 150
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 46.8 bits (106), Expect = 5e-05
Identities = 31/122 (25%), Positives = 53/122 (43%)
Frame = +1
Query: 124 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXXX 303
EL+++ Y L+ + + R +R+ AR L L E+D R+ +A
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 304 DEKQMKLDYVLGLKIEDFLERRLQTQVFNAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 483
+ L+ + F RRL T + +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 484 IV 489
+V
Sbjct: 149 LV 150
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 46.8 bits (106), Expect = 5e-05
Identities = 31/122 (25%), Positives = 53/122 (43%)
Frame = +1
Query: 124 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXXX 303
EL+++ Y L+ + + R +R+ AR L L E+D R+ +A
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 304 DEKQMKLDYVLGLKIEDFLERRLQTQVFNAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 483
+ L+ + F RRL T + +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 484 IV 489
+V
Sbjct: 149 LV 150
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 46.8 bits (106), Expect = 5e-05
Identities = 31/122 (25%), Positives = 53/122 (43%)
Frame = +1
Query: 124 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXXX 303
EL+++ Y L+ + + R +R+ AR L L E+D R+ +A
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 304 DEKQMKLDYVLGLKIEDFLERRLQTQVFNAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 483
+ L+ + F RRL T + +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 484 IV 489
+V
Sbjct: 149 LV 150
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 46.8 bits (106), Expect = 5e-05
Identities = 31/122 (25%), Positives = 53/122 (43%)
Frame = +1
Query: 124 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAXXXXXXXXXXX 303
EL+++ Y L+ + + R +R+ AR L L E+D R+ +A
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRV-RASAALLDKLYALGL 88
Query: 304 DEKQMKLDYVLGLKIEDFLERRLQTQVFNAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 483
+ L+ + F RRL T + +A+ + A + Q H+RV VV P+F
Sbjct: 89 VPTRGSLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 484 IV 489
+V
Sbjct: 149 LV 150
>BC101517-1|AAI01518.1| 637|Homo sapiens RAB11 family interacting
protein 4 (class II) protein.
Length = 637
Score = 30.3 bits (65), Expect = 4.4
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 489 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSIEHLSLKTALQEV---LNLQTEHI 328
D+ER+ + L DT++ L D+ MMD LR+ +E + A QE+ L + EH+
Sbjct: 451 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 510
Query: 327 IQFHL 313
+ L
Sbjct: 511 QMYKL 515
>BC093914-1|AAH93914.1| 637|Homo sapiens RAB11 family interacting
protein 4 (class II) protein.
Length = 637
Score = 30.3 bits (65), Expect = 4.4
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 489 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSIEHLSLKTALQEV---LNLQTEHI 328
D+ER+ + L DT++ L D+ MMD LR+ +E + A QE+ L + EH+
Sbjct: 451 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 510
Query: 327 IQFHL 313
+ L
Sbjct: 511 QMYKL 515
>AY169244-1|AAO21970.1| 637|Homo sapiens rab11-family interacting
protein 4 protein.
Length = 637
Score = 30.3 bits (65), Expect = 4.4
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 489 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSIEHLSLKTALQEV---LNLQTEHI 328
D+ER+ + L DT++ L D+ MMD LR+ +E + A QE+ L + EH+
Sbjct: 451 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 510
Query: 327 IQFHL 313
+ L
Sbjct: 511 QMYKL 515
>AL831830-1|CAD38543.1| 296|Homo sapiens hypothetical protein
protein.
Length = 296
Score = 30.3 bits (65), Expect = 4.4
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 489 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSIEHLSLKTALQEV---LNLQTEHI 328
D+ER+ + L DT++ L D+ MMD LR+ +E + A QE+ L + EH+
Sbjct: 110 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 169
Query: 327 IQFHL 313
+ L
Sbjct: 170 QMYKL 174
>AK097424-1|BAC05045.1| 535|Homo sapiens protein ( Homo sapiens
cDNA FLJ40105 fis, clone TESTI2006383. ).
Length = 535
Score = 30.3 bits (65), Expect = 4.4
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 489 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSIEHLSLKTALQEV---LNLQTEHI 328
D+ER+ + L DT++ L D+ MMD LR+ +E + A QE+ L + EH+
Sbjct: 349 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 408
Query: 327 IQFHL 313
+ L
Sbjct: 409 QMYKL 413
>AJ314646-1|CAC44535.1| 609|Homo sapiens hypothetical protein
protein.
Length = 609
Score = 30.3 bits (65), Expect = 4.4
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 489 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSIEHLSLKTALQEV---LNLQTEHI 328
D+ER+ + L DT++ L D+ MMD LR+ +E + A QE+ L + EH+
Sbjct: 423 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 482
Query: 327 IQFHL 313
+ L
Sbjct: 483 QMYKL 487
>AB058724-1|BAB47450.1| 609|Homo sapiens KIAA1821 protein protein.
Length = 609
Score = 30.3 bits (65), Expect = 4.4
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -1
Query: 489 DDERRNVHHLLADTNMPLSDQ---DAGMMD*LRKTSIEHLSLKTALQEV---LNLQTEHI 328
D+ER+ + L DT++ L D+ MMD LR+ +E + A QE+ L + EH+
Sbjct: 423 DEERQRMSDRLEDTSLRLKDEMDLYKRMMDKLRQNRLEFQKEREATQELIEDLRKELEHL 482
Query: 327 IQFHL 313
+ L
Sbjct: 483 QMYKL 487
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,054,907
Number of Sequences: 237096
Number of extensions: 1642718
Number of successful extensions: 4104
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4104
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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