Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_F09
         (446 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B4ED1 Cluster: PREDICTED: similar to ENSANGP000...    33   2.1  
UniRef50_A7ANG0 Cluster: Putative uncharacterized protein; n=1; ...    32   4.9  
UniRef50_A0BU08 Cluster: Chromosome undetermined scaffold_128, w...    32   6.5  
UniRef50_Q1VX61 Cluster: TrkA domain protein; n=1; Psychroflexus...    31   8.6  

>UniRef50_UPI00015B4ED1 Cluster: PREDICTED: similar to
           ENSANGP00000023276; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000023276 - Nasonia
           vitripennis
          Length = 330

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +2

Query: 5   EGYYLWLLMFNFVAKHRRVPVVSIHSCSVL 94
           E YYL L++ NF  KH+R P+ S  S ++L
Sbjct: 227 EAYYLMLILLNFREKHKRDPLPSERSTNIL 256


>UniRef50_A7ANG0 Cluster: Putative uncharacterized protein; n=1;
            Babesia bovis|Rep: Putative uncharacterized protein -
            Babesia bovis
          Length = 1828

 Score = 32.3 bits (70), Expect = 4.9
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = -2

Query: 340  SNTFSLLIN*LYKASIQNYLNIMYCIKSIWDTRSSVIT 227
            +  F  L    YKA  + Y++I  C  ++W+  +SV+T
Sbjct: 1244 AKNFKSLAEGCYKALFEGYVHIFICHNNLWENHNSVVT 1281


>UniRef50_A0BU08 Cluster: Chromosome undetermined scaffold_128,
           whole genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_128,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 638

 Score = 31.9 bits (69), Expect = 6.5
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = +1

Query: 67  CFDS*LLCISSVREDSHYCYYCLQIKTQIRLYRSLH*EIIPVSQEIIQITSYS 225
           CF +  +  +   E SHY     QI+T IR+ R +   II   Q I Q   YS
Sbjct: 536 CFQNFEVSCTEFLESSHYYINWGQIRTHIRIIRDISRSIIGKFQHIKQSNDYS 588


>UniRef50_Q1VX61 Cluster: TrkA domain protein; n=1; Psychroflexus
           torquis ATCC 700755|Rep: TrkA domain protein -
           Psychroflexus torquis ATCC 700755
          Length = 598

 Score = 31.5 bits (68), Expect = 8.6
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 333 VLLYTRIVYLGIFSVTCFALSAAGRDINSKFAQNN 437
           VLL   +VY+ IF +     S   +D+ SKF  NN
Sbjct: 184 VLLVVGVVYMSIFGIRLLPKSRRSKDLKSKFNVNN 218


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 401,049,552
Number of Sequences: 1657284
Number of extensions: 7138752
Number of successful extensions: 11756
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11756
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)