Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_F07
         (578 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    26   0.27 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    26   0.27 
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   1.9  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   3.3  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   5.7  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   5.7  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 276 NVTRVTANTWPAACCTAVTSC 338
           N+ ++  NTW +  C  VT+C
Sbjct: 301 NIKKLIVNTWISLFCVKVTNC 321


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = -2

Query: 514 SGGIGQHADGALHLGEITAGHHGRGLVVDTDLETGRTPVHELD 386
           +GG+ + +DG  ++ +  +G +G    +DT  E    P   LD
Sbjct: 387 NGGVCRISDGGGYICDCPSGTNGTNCEIDTINECDSNPCKHLD 429


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 3/53 (5%)
 Frame = +1

Query: 124 GVPDQLGALPTYPFPTGHVRSSHLCREGLPRAALC---SGDHERLLRARQPDG 273
           G P   GAL  YPF   H  S      G   AA C     D E+ L   +P G
Sbjct: 63  GFPSPRGALGAYPFRPMHQNSYTGYHLG-SYAANCPPSPKDDEKCLSLERPSG 114


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 462 VISPRCNAPSACC 500
           +ISPRC+  SA C
Sbjct: 36  IISPRCDKISAIC 48


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 151 PTYPFPTGHVRSSHLCREGLPR 216
           P+   PTG ++  + CRE   R
Sbjct: 69  PSVITPTGFLKECYCCRESFLR 90


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 491 CMLSNTTAIADAWARLEHKFDL 556
           C+ S  + +     +L HKFDL
Sbjct: 259 CVRSEASKVVKNAQKLRHKFDL 280


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,296
Number of Sequences: 336
Number of extensions: 3082
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)