Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_F05
         (350 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   3.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   4.8  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    20   6.4  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    20   8.5  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +1

Query: 127 HQNVTDCRTN 156
           H+N+ DC+ N
Sbjct: 66  HENINDCKVN 75


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = -3

Query: 87  VRSGAHFNTSDVRLIHFELYIELREIL 7
           + +G +  T    L HF  Y+++  +L
Sbjct: 230 IATGRYDETRGTMLSHFAYYVDMANML 256


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 138 YVLMIDG*SLR*TPLRTVRSG 76
           Y  ++DG  L   P+ T++SG
Sbjct: 276 YAPVVDGEFLTDEPIATIKSG 296


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -1

Query: 194 LSKSPGFTSMKVRFVRQSVTF**LTASLSD 105
           LSK+  F +     V  SVTF  L+  L+D
Sbjct: 37  LSKAKSFCTFVAALVYCSVTFFALSELLTD 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,545
Number of Sequences: 336
Number of extensions: 1178
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)