Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_F04
         (223 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P20189 Cluster: Transposase for transposon Tn4556; n=4;...    35   0.41 
UniRef50_Q9K5M1 Cluster: Peptide synthetase; n=8; Bacteria|Rep: ...    31   3.8  
UniRef50_Q7CST1 Cluster: AGR_L_2522p; n=2; Agrobacterium tumefac...    31   5.0  
UniRef50_Q54ES0 Cluster: Putative uncharacterized protein; n=1; ...    31   5.0  
UniRef50_Q6FSL0 Cluster: Similarities with sp|Q05854 Saccharomyc...    31   5.0  
UniRef50_A4X4C0 Cluster: Putative uncharacterized protein; n=2; ...    30   8.8  
UniRef50_A7S1F1 Cluster: Predicted protein; n=2; Nematostella ve...    30   8.8  

>UniRef50_P20189 Cluster: Transposase for transposon Tn4556; n=4;
           Actinomycetales|Rep: Transposase for transposon Tn4556 -
           Streptomyces fradiae
          Length = 892

 Score = 34.7 bits (76), Expect = 0.41
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = +1

Query: 85  RSARTFANNTRKFYFPRGRIIPSRSWTPSNASTLRSSIAFGHRDGH 222
           RS + FA N+ K+  PR +++  ++W  +  + L S    G  DGH
Sbjct: 371 RSKQVFAKNSSKWGDPRAKLLAGQAWQQARPTVLASLNLPGEADGH 416


>UniRef50_Q9K5M1 Cluster: Peptide synthetase; n=8; Bacteria|Rep:
            Peptide synthetase - Anabaena circinalis 90
          Length = 5060

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 17/39 (43%), Positives = 19/39 (48%)
 Frame = +1

Query: 82   SRSARTFANNTRKFYFPRGRIIPSRSWTPSNASTLRSSI 198
            S  A    NN R+F  P G +IP RS T   A TL   I
Sbjct: 3218 SEGAAVIINNARRFLKPDGLMIPERSITKMAAVTLPDEI 3256


>UniRef50_Q7CST1 Cluster: AGR_L_2522p; n=2; Agrobacterium
           tumefaciens str. C58|Rep: AGR_L_2522p - Agrobacterium
           tumefaciens (strain C58 / ATCC 33970)
          Length = 650

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
 Frame = -3

Query: 161 QLLEGIILPRGK*NFLVLLAKVRALL-EMVPVDHKLVVEKIR--QTSCLPWKM 12
           QLLEG  L RGK + L LL + R+L  + V +DH L V + R  Q+  L W M
Sbjct: 410 QLLEGQQLLRGKCD-LPLLRRARSLFRKAVDLDHSLAVARARVAQSLQLEWLM 461


>UniRef50_Q54ES0 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 401

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
 Frame = -3

Query: 185 NVDAFDGVQLLEGIIL--PRGK*NFLVLLAKVRALLEMVPVDHKLVVEKIRQTS--CLPW 18
           +VD    + LL+ ++L   R   N LV+  +    LE+VP+DH L +    Q S     W
Sbjct: 225 SVDDIHRIGLLDSLVLNCDRHSGNLLVVAKEDSDRLELVPIDHSLCLPSSDQLSDAWFDW 284

Query: 17  KMFPR 3
             FP+
Sbjct: 285 INFPQ 289


>UniRef50_Q6FSL0 Cluster: Similarities with sp|Q05854 Saccharomyces
           cerevisiae YLR278c; n=1; Candida glabrata|Rep:
           Similarities with sp|Q05854 Saccharomyces cerevisiae
           YLR278c - Candida glabrata (Yeast) (Torulopsis glabrata)
          Length = 1423

 Score = 31.1 bits (67), Expect = 5.0
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +1

Query: 40  RIFSTTNLWSTGTISRSARTFANNTRKFYFPR 135
           R F    LW  G +S   R F N T K Y+ R
Sbjct: 729 RAFHELELWRAGCLSNELRNFENETLKLYYYR 760


>UniRef50_A4X4C0 Cluster: Putative uncharacterized protein; n=2;
           Actinomycetales|Rep: Putative uncharacterized protein -
           Salinispora tropica CNB-440
          Length = 232

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +1

Query: 115 RKFYFPRGRIIPSRSWTPSNASTLRSSIAFGHRDGH 222
           RK  F  G + P+  WTP++ +T R  I  GH  GH
Sbjct: 4   RKELFSAGGV-PAVRWTPADDATDRPLILIGHGGGH 38


>UniRef50_A7S1F1 Cluster: Predicted protein; n=2; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 230

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +1

Query: 79  ISRSARTFANNTRKF-YFPRGRIIPSRSWTPSNASTLRSSIAFGHRDG 219
           +S +  T +++ R+  Y  R     + ++ P+ AST  SS  FGHRDG
Sbjct: 83  VSEAYTTLSSSARRQQYDARLNSSFASTYRPATASTYSSSSPFGHRDG 130


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,286,662
Number of Sequences: 1657284
Number of extensions: 3391072
Number of successful extensions: 8817
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8816
length of database: 575,637,011
effective HSP length: 52
effective length of database: 489,458,243
effective search space used: 10278623103
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)