Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_F04
(223 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-3399|AAF51628.1| 1088|Drosophila melanogaster CG13251-P... 27 4.7
BT016135-1|AAV37020.1| 1218|Drosophila melanogaster GH06496p pro... 26 6.2
AY121713-1|AAM52040.1| 959|Drosophila melanogaster SD04710p pro... 26 6.2
AY075246-1|AAL68113.1| 367|Drosophila melanogaster AT20903p pro... 26 6.2
AY069581-1|AAL39726.1| 642|Drosophila melanogaster LD32037p pro... 26 6.2
AF154417-1|AAD38396.1| 644|Drosophila melanogaster hypoxia-indu... 26 6.2
AF020426-1|AAB88882.1| 644|Drosophila melanogaster basic helix-... 26 6.2
AF016053-1|AAB69695.1| 631|Drosophila melanogaster aryl hydroca... 26 6.2
AE014297-861|AAF54329.1| 642|Drosophila melanogaster CG11987-PA... 26 6.2
AE013599-3550|AAF46961.1| 367|Drosophila melanogaster CG13544-P... 26 6.2
AE013599-3326|AAG22194.1| 1218|Drosophila melanogaster CG6562-PB... 26 6.2
AE013599-3325|AAF46796.1| 1218|Drosophila melanogaster CG6562-PA... 26 6.2
AB002556-1|BAA22868.1| 642|Drosophila melanogaster bHLH-PAS tra... 26 6.2
>AE014296-3399|AAF51628.1| 1088|Drosophila melanogaster CG13251-PA
protein.
Length = 1088
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 115 RKFYFPRGRIIPSRSWTPSNASTL 186
R+ YF GRI+P RSW + L
Sbjct: 1043 RQKYFNFGRILPRRSWASATQHAL 1066
>BT016135-1|AAV37020.1| 1218|Drosophila melanogaster GH06496p
protein.
Length = 1218
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 100 FANNTRKFYFPRGRIIPSRSW 162
+A TRK FP GR + S W
Sbjct: 714 YAEITRKLAFPMGRTLKSHDW 734
>AY121713-1|AAM52040.1| 959|Drosophila melanogaster SD04710p
protein.
Length = 959
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 100 FANNTRKFYFPRGRIIPSRSW 162
+A TRK FP GR + S W
Sbjct: 455 YAEITRKLAFPMGRTLKSHDW 475
>AY075246-1|AAL68113.1| 367|Drosophila melanogaster AT20903p
protein.
Length = 367
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 85 RSARTFANNTRKFYF 129
++ART NN RKFYF
Sbjct: 59 KAARTIQNNWRKFYF 73
>AY069581-1|AAL39726.1| 642|Drosophila melanogaster LD32037p
protein.
Length = 642
Score = 26.2 bits (55), Expect = 6.2
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 102 RQQHQEILLSPGQDYSLQELDPI 170
++QH + +PG DY+ +EL P+
Sbjct: 411 QEQHVYVQAAPGVDYARRELTPV 433
>AF154417-1|AAD38396.1| 644|Drosophila melanogaster
hypoxia-inducible factor 1b protein.
Length = 644
Score = 26.2 bits (55), Expect = 6.2
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 102 RQQHQEILLSPGQDYSLQELDPI 170
++QH + +PG DY+ +EL P+
Sbjct: 413 QEQHVYVQAAPGVDYARRELTPV 435
>AF020426-1|AAB88882.1| 644|Drosophila melanogaster basic
helix-loop-helix PAS protein protein.
Length = 644
Score = 26.2 bits (55), Expect = 6.2
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 102 RQQHQEILLSPGQDYSLQELDPI 170
++QH + +PG DY+ +EL P+
Sbjct: 413 QEQHVYVQAAPGVDYARRELTPV 435
>AF016053-1|AAB69695.1| 631|Drosophila melanogaster aryl
hydrocarbon receptor nucleartranslocator-like protein
protein.
Length = 631
Score = 26.2 bits (55), Expect = 6.2
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 102 RQQHQEILLSPGQDYSLQELDPI 170
++QH + +PG DY+ +EL P+
Sbjct: 413 QEQHVYVQAAPGVDYARRELTPV 435
>AE014297-861|AAF54329.1| 642|Drosophila melanogaster CG11987-PA
protein.
Length = 642
Score = 26.2 bits (55), Expect = 6.2
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 102 RQQHQEILLSPGQDYSLQELDPI 170
++QH + +PG DY+ +EL P+
Sbjct: 411 QEQHVYVQAAPGVDYARRELTPV 433
>AE013599-3550|AAF46961.1| 367|Drosophila melanogaster CG13544-PA
protein.
Length = 367
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 85 RSARTFANNTRKFYF 129
++ART NN RKFYF
Sbjct: 59 KAARTIQNNWRKFYF 73
>AE013599-3326|AAG22194.1| 1218|Drosophila melanogaster CG6562-PB,
isoform B protein.
Length = 1218
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 100 FANNTRKFYFPRGRIIPSRSW 162
+A TRK FP GR + S W
Sbjct: 714 YAEITRKLAFPMGRTLKSHDW 734
>AE013599-3325|AAF46796.1| 1218|Drosophila melanogaster CG6562-PA,
isoform A protein.
Length = 1218
Score = 26.2 bits (55), Expect = 6.2
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 100 FANNTRKFYFPRGRIIPSRSW 162
+A TRK FP GR + S W
Sbjct: 714 YAEITRKLAFPMGRTLKSHDW 734
>AB002556-1|BAA22868.1| 642|Drosophila melanogaster bHLH-PAS
transcription factor protein.
Length = 642
Score = 26.2 bits (55), Expect = 6.2
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 102 RQQHQEILLSPGQDYSLQELDPI 170
++QH + +PG DY+ +EL P+
Sbjct: 411 QEQHVYVQAAPGVDYARRELTPV 433
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,095,427
Number of Sequences: 53049
Number of extensions: 156832
Number of successful extensions: 383
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 383
length of database: 24,988,368
effective HSP length: 53
effective length of database: 22,176,771
effective search space used: 443535420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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