Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_F03
(304 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0297 - 32924162-32924605 31 0.23
01_05_0455 + 22387512-22387629,22388344-22388852 30 0.30
12_01_0173 - 1292164-1293036,1294063-1294098,1294195-1294334,129... 29 0.70
10_01_0158 + 1798370-1798381,1798472-1798840,1799031-1799564 29 0.70
01_07_0069 + 40869496-40869535,40869627-40869663,40870241-408703... 29 0.92
07_03_1487 - 26911652-26911989,26912114-26912201,26912559-26913470 28 1.2
05_01_0239 - 1785699-1785980,1786061-1786284,1786380-1786526,178... 28 1.6
10_06_0036 - 9914606-9915561,9916287-9916368 27 2.1
05_04_0075 - 17690097-17690378,17691079-17691216,17692195-176925... 27 2.1
01_07_0084 + 40976976-40977164,40978174-40978201,40978445-409785... 27 2.1
03_01_0401 - 3108477-3108689,3108787-3108933,3109022-3109234,310... 27 2.8
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511... 27 2.8
09_04_0652 - 19227686-19227926,19229368-19232294 27 3.7
09_02_0449 - 9461385-9461431,9461487-9461628,9461733-9461831,946... 27 3.7
04_04_0690 - 27300048-27300929 27 3.7
02_01_0362 + 2607097-2607371,2607766-2608612,2608842-2608910,260... 27 3.7
01_05_0534 + 22999876-23000333,23000835-23000949 27 3.7
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 26 4.9
05_07_0256 + 28713134-28713964 26 4.9
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 26 4.9
05_03_0645 + 16529635-16529794,16530188-16530312,16531100-165311... 26 4.9
03_06_0425 - 33847906-33848892 26 4.9
12_01_0503 - 3981603-3981730,3982858-3983023,3983057-3983139,398... 26 6.5
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595... 26 6.5
09_04_0519 - 18276797-18276874,18277214-18277419,18277527-182776... 26 6.5
07_01_1098 - 10083800-10084447,10084523-10084792 26 6.5
07_01_0466 - 3518315-3521428 26 6.5
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 26 6.5
04_01_0298 - 3981944-3982348 26 6.5
03_06_0189 + 32214702-32215154 26 6.5
12_02_0792 - 23191120-23191313,23191419-23191775,23192027-231921... 25 8.6
11_03_0191 - 11366831-11367676 25 8.6
09_06_0251 - 21859484-21862162 25 8.6
07_01_0310 + 2209084-2209554 25 8.6
03_06_0112 - 31739783-31740482,31740648-31740777,31740906-31741041 25 8.6
02_05_1260 + 35299795-35299905,35300065-35300112,35301181-35302356 25 8.6
02_05_0819 - 32014236-32016059 25 8.6
02_04_0457 + 23093020-23093343,23093798-23093806 25 8.6
01_06_0112 + 26558618-26558778,26565370-26565580,26565665-265658... 25 8.6
01_05_0169 + 18874799-18875057,18875103-18875338 25 8.6
01_05_0008 - 17063377-17063813,17064937-17065052,17065284-170657... 25 8.6
>03_06_0297 - 32924162-32924605
Length = 147
Score = 30.7 bits (66), Expect = 0.23
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2
Query: 14 GEPITAPPKPEIIDVPRLSVTPPVIIPILANSAAPAE 124
G I +PP PE+ DVPR PP P L P E
Sbjct: 94 GPSIPSPPMPEVPDVPRNPDVPPPKPPELDPPRPPPE 130
>01_05_0455 + 22387512-22387629,22388344-22388852
Length = 208
Score = 30.3 bits (65), Expect = 0.30
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +2
Query: 26 TAPPKPEIIDVP-RLSVTPPVIIPILANSAAPA 121
T PP P + + RLS + V++P+L+ AAPA
Sbjct: 3 TTPPSPSFLFLQIRLSSSSVVLLPVLSGGAAPA 35
>12_01_0173 -
1292164-1293036,1294063-1294098,1294195-1294334,
1295592-1295748,1295862-1296035,1296146-1296396,
1299446-1299590
Length = 591
Score = 29.1 bits (62), Expect = 0.70
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +2
Query: 32 PPKPEIIDV--PRLSVTPPVIIPILA-NSAAPAETSDSDAASLKP 157
PP P I+ PRLSV PP+ +P + N + P + A P
Sbjct: 519 PPLPNIMSAGFPRLSVPPPLPLPTQSQNQSQPQQQQSPQAPQQSP 563
>10_01_0158 + 1798370-1798381,1798472-1798840,1799031-1799564
Length = 304
Score = 29.1 bits (62), Expect = 0.70
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 82 GWCHR*ARYIDDLRFWWRCDRLTK 11
GWC + I D FWWR D+ K
Sbjct: 97 GWCRQNRFNIVDFIFWWRHDKKNK 120
>01_07_0069 +
40869496-40869535,40869627-40869663,40870241-40870387,
40872360-40872405,40872580-40872846,40873151-40873540
Length = 308
Score = 28.7 bits (61), Expect = 0.92
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 38 KPEIIDVPRLSVTPPVIIPILANSAAPAETSDSD 139
K +I D +++ PP I P+ A+ + A DSD
Sbjct: 83 KTDIFDTKEMAIAPPRIQPVSAHLHSSASPKDSD 116
>07_03_1487 - 26911652-26911989,26912114-26912201,26912559-26913470
Length = 445
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2
Query: 44 EIIDVPRLSVTPPVIIPILANSAAPAETSDSDAASLKP 157
E DVPR V ++ + N +PA TS D S KP
Sbjct: 315 EASDVPRTGVAAKLMKCLNENGISPASTSKLDVHSQKP 352
>05_01_0239 -
1785699-1785980,1786061-1786284,1786380-1786526,
1786667-1786775,1786880-1786981,1787090-1787164,
1787277-1787453,1787534-1787623,1787717-1787844,
1787909-1788356
Length = 593
Score = 27.9 bits (59), Expect = 1.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 11 LGEPITAPPKPEIIDVPRLSVTPPVIIP 94
L P T+PP P + +P V PP ++P
Sbjct: 7 LSPPPTSPPGPALSRLPCRRVAPPPVLP 34
>10_06_0036 - 9914606-9915561,9916287-9916368
Length = 345
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 20 PITAPPKPEIIDVPRLSVTPPVIIPILANSAA 115
P APP ++ VP + +PP+ +P AA
Sbjct: 195 PAAAPPSTPVVVVPAPATSPPMSMPATPPEAA 226
>05_04_0075 -
17690097-17690378,17691079-17691216,17692195-17692552,
17692720-17692805
Length = 287
Score = 27.5 bits (58), Expect = 2.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 78 GVTDRRGTSMISGFGGAVIGSPR 10
G ++RG + GFGGA IG+ R
Sbjct: 8 GRREKRGAGCVLGFGGAYIGTGR 30
>01_07_0084 +
40976976-40977164,40978174-40978201,40978445-40978575,
40978941-40979434,40979516-40979609,40979686-40979779,
40980342-40980444,40980550-40980601,40980716-40980756,
40980881-40980960,40981490-40981936,40982378-40982554,
40983205-40983803,40983886-40985040
Length = 1227
Score = 27.5 bits (58), Expect = 2.1
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Frame = +2
Query: 20 PITAPPKPEIIDVPRLSVTPP-VIIPIL------ANSAAPAETSDSDAASLKP 157
PI PP + ++ +S PP +++P++ +S +PA + ++ A+ +P
Sbjct: 706 PIEQPPDADAMETDSVSTAPPNIVVPVVDKQIGSTSSVSPAVAAGANGATSEP 758
>03_01_0401 -
3108477-3108689,3108787-3108933,3109022-3109234,
3109321-3109938,3110045-3110584,3110941-3111041,
3111208-3111325,3111450-3111535,3111888-3112002
Length = 716
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +2
Query: 29 APPK-PEIIDVPRLSVTPPVIIPILANSAAPAETSDSD 139
APP+ P + P + PP P A +AAP +D
Sbjct: 5 APPQVPVVAPAPAAAAAPPAPAPAAAATAAPVADQTTD 42
>01_01_0668 -
5109476-5110112,5110196-5110439,5110519-5110917,
5111390-5111668,5111886-5112257,5112371-5112475,
5112832-5112909,5112990-5113199,5113287-5113406,
5113508-5113606,5113685-5113750,5113914-5114141,
5114216-5114521,5115324-5115381
Length = 1066
Score = 27.1 bits (57), Expect = 2.8
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Frame = +2
Query: 41 PEIIDVPRLSVTPPVIIPILANS---AAPAETSD-SDAASLKP 157
P VPR SV PPV PI+A + A A +SD S+ S+ P
Sbjct: 216 PSTSGVPRESVKPPVAPPIIAQAPRQQALAPSSDHSNGNSVPP 258
>09_04_0652 - 19227686-19227926,19229368-19232294
Length = 1055
Score = 26.6 bits (56), Expect = 3.7
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 59 PRLSVTPPVIIPILANSAAPAETSDSD 139
P +V PP + P+ ++A PA D D
Sbjct: 574 PEDAVAPPAVSPLPEDNAQPASVGDGD 600
>09_02_0449 -
9461385-9461431,9461487-9461628,9461733-9461831,
9462052-9462100,9462179-9462212,9462880-9463055,
9463094-9463532,9463784-9463971,9463988-9464496
Length = 560
Score = 26.6 bits (56), Expect = 3.7
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 26 TAPPKPEIIDVPRLSVTPP 82
TAPP P+I++ P V PP
Sbjct: 163 TAPPDPDILEWPGAPVRPP 181
>04_04_0690 - 27300048-27300929
Length = 293
Score = 26.6 bits (56), Expect = 3.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -2
Query: 117 GAALFAKIGIMTGGVTDRRGTSMISGFGGAVIG 19
GA AK+G+ TG T + + GGAV G
Sbjct: 68 GAGAGAKVGVATGARTGAASSGAGADVGGAVAG 100
>02_01_0362 +
2607097-2607371,2607766-2608612,2608842-2608910,
2609968-2610202,2610454-2610536,2610924-2611046,
2611326-2611379
Length = 561
Score = 26.6 bits (56), Expect = 3.7
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +2
Query: 20 PITAPPKPEIIDVPRLSVTPPVIIPILANSAAPAETSDSDAASL 151
P T+PP P P S P + NS+ P SD SL
Sbjct: 52 PCTSPPAPPETSPPNTSTPAPPAPDVPENSSPPDYDLCSDRCSL 95
>01_05_0534 + 22999876-23000333,23000835-23000949
Length = 190
Score = 26.6 bits (56), Expect = 3.7
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = +2
Query: 20 PITAPPKPEIIDVPRLSVTPPVIIPILANSAAPAETSDSD 139
P++ PPK + P PP + A S++P + D +
Sbjct: 53 PLSPPPKTPTLSTPPTLSQPPTPVKPAAPSSSPPPSQDPE 92
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = +2
Query: 20 PITAPPKPEIIDVPRLSVT--PPVIIP 94
P+ PP P+I P SVT PPV+ P
Sbjct: 408 PLYYPPPPDISPSPPPSVTPLPPVVYP 434
>05_07_0256 + 28713134-28713964
Length = 276
Score = 26.2 bits (55), Expect = 4.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 20 PITAPPKPEIIDVPRLSVTPPVIIPILANSAAPA 121
P +PP P + P ++ P ++P A S APA
Sbjct: 121 PQPSPPPPHATEAPVVAAPPAPVVP-CAPSVAPA 153
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 26.2 bits (55), Expect = 4.9
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -2
Query: 144 AASE--SLVSAGAALFAKIGIMTGGVTDRRGTSM 49
AASE +V+ ALF K G M+GG + RG M
Sbjct: 731 AASEFRRVVTLDGALFEKSGTMSGGGSKPRGGKM 764
>05_03_0645 +
16529635-16529794,16530188-16530312,16531100-16531173,
16531961-16532006,16532638-16532730,16534429-16535886
Length = 651
Score = 26.2 bits (55), Expect = 4.9
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 20 PITAPPKPEIIDVPRLSVTPPVIIPILANSA 112
P+ PP PE++ P + PP P ++S+
Sbjct: 182 PLPPPPPPELVVYPSVPSLPPSATPPSSSSS 212
>03_06_0425 - 33847906-33848892
Length = 328
Score = 26.2 bits (55), Expect = 4.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 17 EPITAPPKPEIIDVPRLSVTPP 82
+ +T PP PEI+ P +S P
Sbjct: 207 QTVTQPPAPEIVHTPLISTPSP 228
>12_01_0503 -
3981603-3981730,3982858-3983023,3983057-3983139,
3983250-3983301,3983497-3983654,3983756-3985617,
3986029-3986093,3986176-3986340,3986836-3986893,
3987479-3987590,3987661-3987712,3988080-3988140,
3988220-3988377,3988705-3988787,3988897-3988945,
3989122-3989185,3990225-3990317,3990410-3990543,
3991364-3991585,3991815-3991937,3992103-3992267,
3993064-3993450
Length = 1479
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 38 KPEIIDVPR-LSVTPPVIIPILANSAAPAETSDSDAAS 148
+ ++D+PR +S PP+ P A++AA A + AA+
Sbjct: 819 RKRMVDIPRSVSKMPPLPSPAAASAAAAAAAPTTAAAA 856
>10_02_0157 -
5954439-5954801,5956244-5956270,5956465-5956526,
5956971-5957592
Length = 357
Score = 25.8 bits (54), Expect = 6.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = +2
Query: 20 PITAPPKPEIIDVPRLSVTPPVII 91
P T PP P ++ P + PP ++
Sbjct: 36 PTTTPPAPTVVAPPLPTTPPPAVV 59
>09_04_0519 -
18276797-18276874,18277214-18277419,18277527-18277683,
18278069-18278454,18279291-18279317,18279609-18279720
Length = 321
Score = 25.8 bits (54), Expect = 6.5
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = -2
Query: 138 SESLVSAGAALFAKIGIMTGGVTDRRGTSMISGFGGAVIGSP 13
SES +A AA + + GG R S S A GSP
Sbjct: 74 SESPAAAAAAAMLRSALRRGGAAVRHAASSSSAAEAAADGSP 115
>07_01_1098 - 10083800-10084447,10084523-10084792
Length = 305
Score = 25.8 bits (54), Expect = 6.5
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 23 ITAPPKPEIIDVPRLSVTPP 82
+T PP PEI+ P ++V P
Sbjct: 186 VTQPPAPEIVHTPLVTVPSP 205
>07_01_0466 - 3518315-3521428
Length = 1037
Score = 25.8 bits (54), Expect = 6.5
Identities = 17/49 (34%), Positives = 21/49 (42%)
Frame = +2
Query: 11 LGEPITAPPKPEIIDVPRLSVTPPVIIPILANSAAPAETSDSDAASLKP 157
L EP+ PP P PP P A +A A +D+DAA P
Sbjct: 139 LDEPVAPPPPPP---------EPPAADPAPAEAAPDAPPADADAAPEAP 178
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 68 SVTPPVIIPILANSAAPAET 127
+VTP + I++ SAAPAET
Sbjct: 137 TVTPGTKVAIISKSAAPAET 156
>04_01_0298 - 3981944-3982348
Length = 134
Score = 25.8 bits (54), Expect = 6.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +2
Query: 23 ITAPPKPEIIDVPRLSVTPP 82
+T PP PEI+ P +S P
Sbjct: 15 VTQPPAPEIVHTPLISTPSP 34
>03_06_0189 + 32214702-32215154
Length = 150
Score = 25.8 bits (54), Expect = 6.5
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 4/36 (11%)
Frame = +2
Query: 20 PITAPPKPEIIDVPRLSVTP----PVIIPILANSAA 115
P T PP P I VP+ ++ P P + ++ N+AA
Sbjct: 49 PTTLPPMPAIPAVPQAALPPMPAVPTVPAVVPNAAA 84
>12_02_0792 -
23191120-23191313,23191419-23191775,23192027-23192108,
23192186-23193097,23193190-23193346,23193540-23193694,
23194667-23194819,23195334-23195627,23195711-23195896,
23196062-23196662,23196868-23196992,23197101-23197197,
23197299-23197411,23198129-23198233
Length = 1176
Score = 25.4 bits (53), Expect = 8.6
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 41 PEIIDVPRLSVTPPVIIPILANSAAPAETSDSDAAS 148
P ID SVTP +P+ S P+ T+ +AS
Sbjct: 196 PGSIDAQEPSVTPSDGVPVTDKSEEPSTTTGKKSAS 231
>11_03_0191 - 11366831-11367676
Length = 281
Score = 25.4 bits (53), Expect = 8.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 17 EPITAPPKPEIIDVPRLSVTPP 82
+ +T PP PEI + P +S + P
Sbjct: 160 QTVTQPPAPEIRNTPLISTSSP 181
>09_06_0251 - 21859484-21862162
Length = 892
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 32 PPKPEIIDVPRLSVTPPVIIPILANSAAPAETSDSDAASLKP 157
PP + D S V +P+ A+++A T DS AS P
Sbjct: 117 PPLLALFDPDTSSDLGHVFLPVSASASASNATDDSGVASPSP 158
>07_01_0310 + 2209084-2209554
Length = 156
Score = 25.4 bits (53), Expect = 8.6
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = +2
Query: 23 ITAPPKPEIIDVPRLSVTPPVIIPI 97
+T PP P I VP++++ P +P+
Sbjct: 123 VTLPPMPSIPAVPKVTLPPMPSVPM 147
>03_06_0112 - 31739783-31740482,31740648-31740777,31740906-31741041
Length = 321
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +2
Query: 14 GEPITAPPKPEIIDVPRLSVTPPVIIPILANSAAPAETSDSDAASLKP 157
G P A P P I P + P +P LA+ P +S+ P
Sbjct: 208 GNPFAASPAPPCIPPPPMYEEAPSFVPPLAH-GVPLNEGGMQCSSVLP 254
>02_05_1260 + 35299795-35299905,35300065-35300112,35301181-35302356
Length = 444
Score = 25.4 bits (53), Expect = 8.6
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2
Query: 20 PITAPPKPEIIDVPRLSVTPPVIIPILANSAAPAETSDSDAASL 151
P T P PEI P PP + P +A ++PA S AS+
Sbjct: 88 PRTDAPMPEIPIHP-----PPPVFPFVAPPSSPASFLQSGGASI 126
>02_05_0819 - 32014236-32016059
Length = 607
Score = 25.4 bits (53), Expect = 8.6
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 32 PPKPEIIDVPRLSVTPPVIIPILANSAAPAETSDSDAASLKP 157
PPK + VPR S +PPV P++ + P D + P
Sbjct: 225 PPKFKHKRVPRASGSPPV--PVMHSPPRPVTVKDQQDWKIPP 264
>02_04_0457 + 23093020-23093343,23093798-23093806
Length = 110
Score = 25.4 bits (53), Expect = 8.6
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -2
Query: 141 ASESLVSAGAALFAKIGIMTGGVTDRRGTSMISGFGGAVIGSPR 10
A E + G + A G+ GGV G + G GG V+G R
Sbjct: 36 AEEEAYACGGSGEADAGVDLGGVGVGLGVVGVLGGGGVVLGRRR 79
>01_06_0112 +
26558618-26558778,26565370-26565580,26565665-26565826,
26566650-26566874,26566960-26567073
Length = 290
Score = 25.4 bits (53), Expect = 8.6
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = +2
Query: 35 PKPEIIDVPRLSVTPPVII-PILANSAAP 118
P P I+D+P+ S PV++ P A + AP
Sbjct: 188 PAPVIVDLPQASSQAPVVVDPPQAPAQAP 216
>01_05_0169 + 18874799-18875057,18875103-18875338
Length = 164
Score = 25.4 bits (53), Expect = 8.6
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 2 HEGLGEPITAPPKPEIIDVPRLSVTPP 82
H LGE +T PP EI+ P + P
Sbjct: 80 HALLGEVVTQPPALEIMHTPLIPTPSP 106
>01_05_0008 -
17063377-17063813,17064937-17065052,17065284-17065728,
17066421-17066760
Length = 445
Score = 25.4 bits (53), Expect = 8.6
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = +1
Query: 22 DHSATKTGDHRCTAPICDTTRHYTDLGKQCCTGGDQRLGRGISKTVYD 165
D+ T TGDH ICD H G C D+ R K+ ++
Sbjct: 278 DNYDTGTGDHYSLRQICD-QEHIRGGGHSCFWDSDEARLRSRRKSFWE 324
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,238,433
Number of Sequences: 37544
Number of extensions: 114101
Number of successful extensions: 567
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 351703996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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