BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_F03
(304 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 1.9
AF043433-1|AAC05656.1| 231|Anopheles gambiae putative pupal-spe... 23 1.9
U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette... 23 3.4
U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette... 23 3.4
U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette... 23 3.4
DQ974165-1|ABJ52805.1| 482|Anopheles gambiae serpin 5 protein. 22 4.4
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 22 4.4
CR954257-8|CAJ14159.1| 562|Anopheles gambiae putative esterase ... 22 4.4
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.4 bits (48), Expect = 1.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 84 TGGVTDRRGTSMISGFGGAVIGSP 13
TGGV R G+S G GG GSP
Sbjct: 1010 TGGVIKRSGSSSPGGTGG---GSP 1030
>AF043433-1|AAC05656.1| 231|Anopheles gambiae putative
pupal-specific cuticular proteinprotein.
Length = 231
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3
Query: 75 HHPSLYRSWQTVLHRRRPA 131
HH S+ S T+ H RPA
Sbjct: 24 HHGSIATSHSTIQHHARPA 42
>U29486-1|AAC46995.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 65 LSVTPPVIIPIL 100
LSV PPV+IP L
Sbjct: 583 LSVGPPVVIPFL 594
>U29485-1|AAC46994.1| 695|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 695
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 65 LSVTPPVIIPIL 100
LSV PPV+IP L
Sbjct: 583 LSVGPPVVIPFL 594
>U29484-1|AAC47423.1| 673|Anopheles gambiae ATP-binding-cassette
protein protein.
Length = 673
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2
Query: 65 LSVTPPVIIPIL 100
LSV PPV+IP L
Sbjct: 561 LSVGPPVVIPFL 572
>DQ974165-1|ABJ52805.1| 482|Anopheles gambiae serpin 5 protein.
Length = 482
Score = 22.2 bits (45), Expect = 4.4
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = -2
Query: 144 AASESLVSAGAALFAKIGIMTGGVTDRRGTSMISGFGGAVIGS 16
A SE LV A L +G+M G +S F IGS
Sbjct: 45 AVSEQLVGAINDLARTLGVMAGRGGSSSNSSKTELFSPVSIGS 87
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 22.2 bits (45), Expect = 4.4
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +2
Query: 11 LGEPITAPPKPEIIDVPRLSVTPPV 85
LG P PP ++++P + PP+
Sbjct: 528 LGPPPPPPPGGAVLNIPPQFLPPPL 552
>CR954257-8|CAJ14159.1| 562|Anopheles gambiae putative esterase
protein.
Length = 562
Score = 22.2 bits (45), Expect = 4.4
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +1
Query: 64 PICDTTRHYTDLGKQCCTG 120
P+ T HY D+G TG
Sbjct: 516 PVTAATVHYMDIGHDLVTG 534
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,676
Number of Sequences: 2352
Number of extensions: 3515
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 55
effective length of database: 434,619
effective search space used: 19557855
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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