Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0003_F02
         (142 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection...    23   1.3  
AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    21   5.3  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            21   5.3  
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    20   9.2  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    20   9.2  

>AJ237664-1|CAB40379.2|   81|Anopheles gambiae putative infection
           responsive shortpeptide protein.
          Length = 81

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 103 DVSNTYDHCQNKKRAYGHCS 44
           D   T + C++ KR +G CS
Sbjct: 53  DGQTTINSCEDCKRKFGRCS 72


>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -3

Query: 110 YYGRVQYIRPLPK*EARVRPLFSCMLP 30
           YY    Y+ P PK +  + P  +C  P
Sbjct: 404 YYHNPDYVAPTPKAKTHICP--TCKRP 428


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 21.0 bits (42), Expect = 5.3
 Identities = 5/12 (41%), Positives = 7/12 (58%)
 Frame = +3

Query: 54  PYARFLFWQWSY 89
           P   + FW+W Y
Sbjct: 520 PECNYTFWEWLY 531


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 46  NNGRTRASYFGNGRMYW 96
           NN    A+ F NGR  W
Sbjct: 353 NNSPQAATDFWNGRAQW 369


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +1

Query: 46  NNGRTRASYFGNGRMYW 96
           NN    A+ F NGR  W
Sbjct: 353 NNSPQAATDFWNGRAQW 369


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,798
Number of Sequences: 2352
Number of extensions: 2186
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 26
effective length of database: 502,827
effective search space used: 10056540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)