Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_F01
(377 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 101 6e-22
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 101 6e-22
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 101 6e-22
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 101 6e-22
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 100 1e-21
AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5 pr... 91 1e-18
BC101089-1|AAI01090.1| 213|Homo sapiens sclerosteosis protein. 31 1.6
BC101088-1|AAI01089.1| 213|Homo sapiens sclerosteosis protein. 31 1.6
BC101087-1|AAI01088.1| 213|Homo sapiens sclerosteosis protein. 31 1.6
BC101086-1|AAI01087.1| 213|Homo sapiens sclerosteosis protein. 31 1.6
AY358627-1|AAQ88990.1| 213|Homo sapiens SOST protein. 31 1.6
AY358203-1|AAQ88570.1| 217|Homo sapiens SOST protein. 31 1.6
AF331844-1|AAK16158.1| 213|Homo sapiens SOST protein. 31 1.6
AF326739-1|AAK13454.1| 213|Homo sapiens sclerostin protein. 31 1.6
AF326736-1|AAK13451.1| 213|Homo sapiens sclerostin protein. 31 1.6
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 101 bits (243), Expect = 6e-22
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = -1
Query: 281 VPHVRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKR 123
V +RRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKK+
Sbjct: 141 VSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 193
Score = 63.3 bits (147), Expect = 3e-10
Identities = 31/33 (93%), Positives = 31/33 (93%)
Frame = -2
Query: 376 QVLVTAISNSGPREDSTRIGRAGTVRRQAVDVS 278
QVLV AI NSGPREDSTRIGRAGTVRRQAVDVS
Sbjct: 110 QVLVNAIINSGPREDSTRIGRAGTVRRQAVDVS 142
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3
Query: 132 QEKDELERVAKSNR 91
++KDELERVAKSNR
Sbjct: 191 KKKDELERVAKSNR 204
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 101 bits (243), Expect = 6e-22
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = -1
Query: 281 VPHVRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKR 123
V +RRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKK+
Sbjct: 141 VSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 193
Score = 63.3 bits (147), Expect = 3e-10
Identities = 31/33 (93%), Positives = 31/33 (93%)
Frame = -2
Query: 376 QVLVTAISNSGPREDSTRIGRAGTVRRQAVDVS 278
QVLV AI NSGPREDSTRIGRAGTVRRQAVDVS
Sbjct: 110 QVLVNAIINSGPREDSTRIGRAGTVRRQAVDVS 142
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3
Query: 132 QEKDELERVAKSNR 91
++KDELERVAKSNR
Sbjct: 191 KKKDELERVAKSNR 204
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 101 bits (243), Expect = 6e-22
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = -1
Query: 281 VPHVRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKR 123
V +RRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKK+
Sbjct: 141 VSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 193
Score = 63.3 bits (147), Expect = 3e-10
Identities = 31/33 (93%), Positives = 31/33 (93%)
Frame = -2
Query: 376 QVLVTAISNSGPREDSTRIGRAGTVRRQAVDVS 278
QVLV AI NSGPREDSTRIGRAGTVRRQAVDVS
Sbjct: 110 QVLVNAIINSGPREDSTRIGRAGTVRRQAVDVS 142
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3
Query: 132 QEKDELERVAKSNR 91
++KDELERVAKSNR
Sbjct: 191 KKKDELERVAKSNR 204
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 101 bits (243), Expect = 6e-22
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = -1
Query: 281 VPHVRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKR 123
V +RRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKK+
Sbjct: 141 VSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 193
Score = 63.3 bits (147), Expect = 3e-10
Identities = 31/33 (93%), Positives = 31/33 (93%)
Frame = -2
Query: 376 QVLVTAISNSGPREDSTRIGRAGTVRRQAVDVS 278
QVLV AI NSGPREDSTRIGRAGTVRRQAVDVS
Sbjct: 110 QVLVNAIINSGPREDSTRIGRAGTVRRQAVDVS 142
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3
Query: 132 QEKDELERVAKSNR 91
++KDELERVAKSNR
Sbjct: 191 KKKDELERVAKSNR 204
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 100 bits (240), Expect = 1e-21
Identities = 48/53 (90%), Positives = 50/53 (94%)
Frame = -1
Query: 281 VPHVRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKR 123
V +RRVNQAIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSN YAIKKR
Sbjct: 141 VSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNFYAIKKR 193
Score = 63.3 bits (147), Expect = 3e-10
Identities = 31/33 (93%), Positives = 31/33 (93%)
Frame = -2
Query: 376 QVLVTAISNSGPREDSTRIGRAGTVRRQAVDVS 278
QVLV AI NSGPREDSTRIGRAGTVRRQAVDVS
Sbjct: 110 QVLVNAIINSGPREDSTRIGRAGTVRRQAVDVS 142
>AB007149-1|BAA25815.1| 55|Homo sapiens ribosomal protein S5
protein.
Length = 55
Score = 91.1 bits (216), Expect = 1e-18
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = -1
Query: 254 AIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKR 123
AIWLLCTGAREAAFRNIKTIAEC+ADELINAAKGSSNSYAIKK+
Sbjct: 1 AIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 44
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3
Query: 132 QEKDELERVAKSNR 91
++KDELERVAKSNR
Sbjct: 42 KKKDELERVAKSNR 55
>BC101089-1|AAI01090.1| 213|Homo sapiens sclerosteosis protein.
Length = 213
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -1
Query: 311 WYSSTSSRRCVPHVRRVNQAIWLLCTGAREAAFRNIKTIAECVADEL 171
W S RC+P R Q + LLC G R ++ +A C L
Sbjct: 125 WRPSGPDFRCIPDRYRA-QRVQLLCPGGEAPRARKVRLVASCKCKRL 170
>BC101088-1|AAI01089.1| 213|Homo sapiens sclerosteosis protein.
Length = 213
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -1
Query: 311 WYSSTSSRRCVPHVRRVNQAIWLLCTGAREAAFRNIKTIAECVADEL 171
W S RC+P R Q + LLC G R ++ +A C L
Sbjct: 125 WRPSGPDFRCIPDRYRA-QRVQLLCPGGEAPRARKVRLVASCKCKRL 170
>BC101087-1|AAI01088.1| 213|Homo sapiens sclerosteosis protein.
Length = 213
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -1
Query: 311 WYSSTSSRRCVPHVRRVNQAIWLLCTGAREAAFRNIKTIAECVADEL 171
W S RC+P R Q + LLC G R ++ +A C L
Sbjct: 125 WRPSGPDFRCIPDRYRA-QRVQLLCPGGEAPRARKVRLVASCKCKRL 170
>BC101086-1|AAI01087.1| 213|Homo sapiens sclerosteosis protein.
Length = 213
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -1
Query: 311 WYSSTSSRRCVPHVRRVNQAIWLLCTGAREAAFRNIKTIAECVADEL 171
W S RC+P R Q + LLC G R ++ +A C L
Sbjct: 125 WRPSGPDFRCIPDRYRA-QRVQLLCPGGEAPRARKVRLVASCKCKRL 170
>AY358627-1|AAQ88990.1| 213|Homo sapiens SOST protein.
Length = 213
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -1
Query: 311 WYSSTSSRRCVPHVRRVNQAIWLLCTGAREAAFRNIKTIAECVADEL 171
W S RC+P R Q + LLC G R ++ +A C L
Sbjct: 125 WRPSGPDFRCIPDRYRA-QRVQLLCPGGEAPRARKVRLVASCKCKRL 170
>AY358203-1|AAQ88570.1| 217|Homo sapiens SOST protein.
Length = 217
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -1
Query: 311 WYSSTSSRRCVPHVRRVNQAIWLLCTGAREAAFRNIKTIAECVADEL 171
W S RC+P R Q + LLC G R ++ +A C L
Sbjct: 129 WRPSGPDFRCIPDRYRA-QRVQLLCPGGEAPRARKVRLVASCKCKRL 174
>AF331844-1|AAK16158.1| 213|Homo sapiens SOST protein.
Length = 213
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -1
Query: 311 WYSSTSSRRCVPHVRRVNQAIWLLCTGAREAAFRNIKTIAECVADEL 171
W S RC+P R Q + LLC G R ++ +A C L
Sbjct: 125 WRPSGPDFRCIPDRYRA-QRVQLLCPGGEAPRARKVRLVASCKCKRL 170
>AF326739-1|AAK13454.1| 213|Homo sapiens sclerostin protein.
Length = 213
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -1
Query: 311 WYSSTSSRRCVPHVRRVNQAIWLLCTGAREAAFRNIKTIAECVADEL 171
W S RC+P R Q + LLC G R ++ +A C L
Sbjct: 125 WRPSGPDFRCIPDRYRA-QRVQLLCPGGEAPRARKVRLVASCKCKRL 170
>AF326736-1|AAK13451.1| 213|Homo sapiens sclerostin protein.
Length = 213
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = -1
Query: 311 WYSSTSSRRCVPHVRRVNQAIWLLCTGAREAAFRNIKTIAECVADEL 171
W S RC+P R Q + LLC G R ++ +A C L
Sbjct: 125 WRPSGPDFRCIPDRYRA-QRVQLLCPGGEAPRARKVRLVASCKCKRL 170
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,935,565
Number of Sequences: 237096
Number of extensions: 910282
Number of successful extensions: 1862
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1862
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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