Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0003_E22
(444 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical pr... 31 0.28
Z68301-6|CAA92621.1| 170|Caenorhabditis elegans Hypothetical pr... 30 0.87
Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical pr... 29 1.1
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 29 1.1
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 1.5
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 1.5
Z67990-5|CAA91936.2| 638|Caenorhabditis elegans Hypothetical pr... 29 2.0
AB012617-1|BAA33488.1| 638|Caenorhabditis elegans FLR-1 protein. 29 2.0
Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical pr... 28 2.7
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 28 2.7
AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical... 28 2.7
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 28 2.7
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 28 3.5
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 28 3.5
AL023844-11|CAA19525.3| 489|Caenorhabditis elegans Hypothetical... 27 4.6
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 27 6.1
U50311-2|AAA92308.2| 486|Caenorhabditis elegans Hypothetical pr... 27 8.1
AL132898-11|CAB60945.4| 552|Caenorhabditis elegans Hypothetical... 27 8.1
>U23147-1|AAC46692.2| 674|Caenorhabditis elegans Hypothetical
protein C18H9.8 protein.
Length = 674
Score = 31.5 bits (68), Expect = 0.28
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +2
Query: 71 PNGGSSRPRTPTGLLTPSGRQRTPSGSTTP 160
P+ SSRPRT TG PS R R PS P
Sbjct: 54 PSTASSRPRTSTG-RAPSARARPPSAMRAP 82
>Z68301-6|CAA92621.1| 170|Caenorhabditis elegans Hypothetical
protein W01B6.8 protein.
Length = 170
Score = 29.9 bits (64), Expect = 0.87
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Frame = +2
Query: 62 LTTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTPVRSGQ----QTAVSRLLRKPSDASE 223
+ P G +++ T + +LTP+ +Q+T T P R Q V R KP D E
Sbjct: 108 INVPLGKAAKDETSSNILTPANKQKTDL-HTAPTRKAQFADTLKRVKRRATKPDDPDE 164
>Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical
protein T24F1.1 protein.
Length = 312
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 256 RDSLVTNNGETRAVPIVNEKKKLYAECFISNLWE 357
R++ V E A P+ NE+ +CF S++W+
Sbjct: 141 READVLRYSELAATPLQNERTNAVCQCFKSSIWD 174
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 65 TTPNGGSSRP-RTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDAS 220
T P S+ P +T T + R PS STTPV++ TA +P +S
Sbjct: 339 TEPPSSSTTPVQTTTTTAPETTRTEPPSSSTTPVQNTTTTAPETTSTEPPSSS 391
Score = 27.9 bits (59), Expect = 3.5
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 65 TTPNGGSSRP-RTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDAS 220
T P S+ P +T T + +PS STTPV++ TA +P +S
Sbjct: 224 TEPPSSSTTPVQTTTTTAPETTSTESPSSSTTPVQTTTTTAPETTSTEPPSSS 276
Score = 27.9 bits (59), Expect = 3.5
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQ-RTPSGSTTPVRSGQQTAVSRLLRKPSDAS 220
T P S+ P T + P PS STTPV++ TA +P +S
Sbjct: 293 TEPPSSSTTPVQTTTITAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 345
Score = 27.9 bits (59), Expect = 3.5
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQ-RTPSGSTTPVRSGQQTAVSRLLRKPSDAS 220
T P S+ P T + P PS STTPV++ TA +P +S
Sbjct: 408 TEPPSSSTTPVQTTTITAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 460
Score = 27.9 bits (59), Expect = 3.5
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +2
Query: 65 TTPNGGSSRP-RTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDAS 220
T P S+ P +T T + +PS STTPV++ TA +P +S
Sbjct: 500 TEPPSSSTTPVQTTTTTAPETTSTESPSSSTTPVQTTTTTAPETTSTEPPSSS 552
Score = 27.9 bits (59), Expect = 3.5
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQ-RTPSGSTTPVRSGQQTAVSRLLRKPSDAS 220
T P S+ P T + P PS STTPV++ TA +P +S
Sbjct: 730 TEPPSSSTTPVQTTTITAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 782
Score = 27.9 bits (59), Expect = 3.5
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQ-RTPSGSTTPVRSGQQTAVSRLLRKPSDAS 220
T P S+ P T + P PS STTPV++ TA +P +S
Sbjct: 868 TEPPSSSTTPVQTTTITAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 920
Score = 27.5 bits (58), Expect = 4.6
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 65 TTPNGGSSRP-RTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDAS 220
T P S+ P +T T + PS STTPV++ TA +P +S
Sbjct: 86 TEPPSSSTTPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSS 138
Score = 27.5 bits (58), Expect = 4.6
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 71 PNGGSSRPRTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDAS 220
P+ +S +T T + PS STTPV++ TA +P +S
Sbjct: 135 PSSSTSPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSS 184
Score = 27.1 bits (57), Expect = 6.1
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 71 PNGGSSRPRTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDAS 220
P+ +S +T T + PS STTPV++ TA +P +S
Sbjct: 181 PSSSTSPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 230
Score = 27.1 bits (57), Expect = 6.1
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 65 TTPNGGSSRP-RTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDAS 220
T P S+ P +T T + PS STTPV++ TA +P +S
Sbjct: 316 TEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTRTEPPSSS 368
Score = 27.1 bits (57), Expect = 6.1
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 65 TTPNGGSSRP-RTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDAS 220
T P S+ P +T T + PS STTPV++ TA +P +S
Sbjct: 431 TEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 483
Score = 27.1 bits (57), Expect = 6.1
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 65 TTPNGGSSRP-RTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDAS 220
T P S+ P +T T + PS STTPV++ TA +P +S
Sbjct: 546 TEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 598
Score = 27.1 bits (57), Expect = 6.1
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 65 TTPNGGSSRP-RTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDAS 220
T P S+ P +T T + PS STTPV++ TA +P +S
Sbjct: 569 TEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 621
Score = 27.1 bits (57), Expect = 6.1
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 65 TTPNGGSSRP-RTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDAS 220
T P S+ P +T T + PS STTPV++ TA +P +S
Sbjct: 592 TEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 644
Score = 27.1 bits (57), Expect = 6.1
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 65 TTPNGGSSRP-RTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDAS 220
T P S+ P +T T + PS STTPV++ TA +P +S
Sbjct: 615 TEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 667
Score = 27.1 bits (57), Expect = 6.1
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = +2
Query: 65 TTPNGGSSRP-RTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDAS 220
T P S+ P +T T + PS STTPV++ TA +P +S
Sbjct: 638 TEPPSSSTTPVQTTTTTAPETTSTEPPSSSTTPVQTTTTTAPETTSTEPPSSS 690
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +2
Query: 77 GGSSRPRTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDASE 223
GGS + + PSG PSGS+T SG T S +PS +S+
Sbjct: 502 GGSDSSSSESVTTEPSGSSTEPSGSSTE-PSGSSTEPSGSSTEPSGSSD 549
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDA 217
T P+G S+ P + PSG PSGS+T ++ S L +D+
Sbjct: 514 TEPSGSSTEPSGSS--TEPSGSSTEPSGSSTEPSGSSDSSSSELPNSSTDS 562
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +2
Query: 77 GGSSRPRTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDASE 223
GGS + + PSG PSGS+T SG T S +PS +S+
Sbjct: 502 GGSDSSSSESVTTEPSGSSTEPSGSSTE-PSGSSTEPSGSSTEPSGSSD 549
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDA 217
T P+G S+ P + PSG PSGS+T ++ S L +D+
Sbjct: 514 TEPSGSSTEPSGSS--TEPSGSSTEPSGSSTEPSGSSDSSSSELPNSSTDS 562
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +2
Query: 77 GGSSRPRTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDASE 223
GGS + + PSG PSGS+T SG T S +PS +S+
Sbjct: 502 GGSDSSSSESVTTEPSGSSTEPSGSSTE-PSGSSTEPSGSSTEPSGSSD 549
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDA 217
T P+G S+ P + PSG PSGS+T ++ S L +D+
Sbjct: 514 TEPSGSSTEPSGSS--TEPSGSSTEPSGSSTEPSGSSDSSSSELPNSSTDS 562
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.1 bits (62), Expect = 1.5
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = +2
Query: 77 GGSSRPRTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDASE 223
GGS + + PSG PSGS+T SG T S +PS +S+
Sbjct: 502 GGSDSSSSESVTTEPSGSSTEPSGSSTE-PSGSSTEPSGSSTEPSGSSD 549
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDA 217
T P+G S+ P + PSG PSGS+T ++ S L +D+
Sbjct: 514 TEPSGSSTEPSGSS--TEPSGSSTEPSGSSTEPSGSSDSSSSELPNSSTDS 562
>Z67990-5|CAA91936.2| 638|Caenorhabditis elegans Hypothetical
protein F02D10.5 protein.
Length = 638
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 253 TRDSLVTNNGETRAVPIVNEKKKLYAECF-ISNLWEIISTYAMQVALKLSISKFSLYNTC 429
T + T GE + + I+N ++L + F + N + +S + + S + L+N C
Sbjct: 126 TSEHKSTKLGEEQFLEIMNNYQELTKQEFNVKNFLKSVSKSCEETFISCSFGREKLHNCC 185
Query: 430 LHLST 444
H++T
Sbjct: 186 EHVTT 190
>AB012617-1|BAA33488.1| 638|Caenorhabditis elegans FLR-1 protein.
Length = 638
Score = 28.7 bits (61), Expect = 2.0
Identities = 16/65 (24%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 253 TRDSLVTNNGETRAVPIVNEKKKLYAECF-ISNLWEIISTYAMQVALKLSISKFSLYNTC 429
T + T GE + + I+N ++L + F + N + +S + + S + L+N C
Sbjct: 126 TSEHKSTKLGEEQFLEIMNNYQELTKQEFNVKNFLKSVSKSCEETFISCSFGREKLHNCC 185
Query: 430 LHLST 444
H++T
Sbjct: 186 EHVTT 190
>Z81465-4|CAB03866.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 89 RPRTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDASE 223
RPR+PT + SGR R+P+ + + ++++ R R P+ S+
Sbjct: 509 RPRSPTDVSHDSGRPRSPTDLSQSTKPSRRSSSIR-PRSPTSTSQ 552
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +1
Query: 154 DASAFRSTDCRVQIAKEAFGRVRGRNPHDPWSPTRDSLVTNNGETRAVPIVNEKKKLYAE 333
D S +R D + + P W+P ++ VT ET +PI++ + ++ E
Sbjct: 635 DISEYRPPDVESHMIRFTTQSPEWATPSPTWNPAWNT-VTAEEETPGIPIIHSQCQVNGE 693
Query: 334 C 336
C
Sbjct: 694 C 694
>AL032646-13|CAA21687.3| 613|Caenorhabditis elegans Hypothetical
protein Y54E2A.1 protein.
Length = 613
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 89 RPRTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDASE 223
RPR+PT + SGR R+P+ + + ++++ R R P+ S+
Sbjct: 509 RPRSPTDVSHDSGRPRSPTDLSQSTKPSRRSSSIR-PRSPTSTSQ 552
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTP 160
TTP S P TPT TP+ + TP+ TTP
Sbjct: 173 TTPTTMKSTPTTPT---TPTTMKSTPTTPTTP 201
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTP 160
TTP S P TPT TP+ + TP+ TTP
Sbjct: 186 TTPTTMKSTPTTPT---TPTTMKSTPTTPTTP 214
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTP 160
TTP S P TPT TP+ + TP+ TTP
Sbjct: 199 TTPTTMKSTPTTPT---TPTTMKSTPTTPTTP 227
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTP 160
TTP S P TPT TP+ + TP+ TTP
Sbjct: 212 TTPTTMKSTPTTPT---TPTTMKSTPTTPTTP 240
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTP 160
TTP S P TPT TP+ + TP+ TTP
Sbjct: 225 TTPTTMKSTPTTPT---TPTTMKSTPTTPTTP 253
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTP 160
TTP S P TPT TP+ + TP+ TTP
Sbjct: 238 TTPTTMKSTPTTPT---TPTTMKSTPTTPTTP 266
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTP 160
TTP S P TPT TP+ + TP+ TTP
Sbjct: 251 TTPTTMKSTPTTPT---TPTTMKSTPTTPTTP 279
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTP 160
TTP S P TPT TP+ + TP+ TTP
Sbjct: 287 TTPTTMKSTPTTPT---TPTTMKSTPTTPTTP 315
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTP 160
TTP S P TPT TP+ + TP+ TTP
Sbjct: 300 TTPTTMKSTPTTPT---TPTTMKSTPTTPTTP 328
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTP 160
TTP S P TPT TP+ + TP+ TTP
Sbjct: 313 TTPTTMKSTPTTPT---TPTTMKSTPTTPTTP 341
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTP 160
TTP S P TPT TP+ + TP+ TTP
Sbjct: 326 TTPTTMKSTPTTPT---TPTTMKSTPTTPTTP 354
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTP 160
TTP S P TPT TP+ + TP+ TTP
Sbjct: 339 TTPTTMKSTPTTPT---TPTTMKSTPTTPTTP 367
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTP 160
TTP S P TPT TP+ + TP+ TTP
Sbjct: 352 TTPTTMKSTPTTPT---TPTTMKSTPTTPTTP 380
Score = 28.3 bits (60), Expect = 2.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTP 160
TTP S P TPT TP+ + TP+ TTP
Sbjct: 365 TTPTTMKSTPTTPT---TPTTMKSTPTTPTTP 393
Score = 27.1 bits (57), Expect = 6.1
Identities = 19/72 (26%), Positives = 29/72 (40%)
Frame = +2
Query: 65 TTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTPVRSGQQTAVSRLLRKPSDASEXXXXXXX 244
TTP ++ TPT TP+ + TP+ TT ++S T + K + +
Sbjct: 375 TTPTTPTTMKSTPTTPTTPTTMKSTPTTPTT-MKSTPTTPTTPTTMKSTPTTPTTMKSTP 433
Query: 245 XXXXXXXSSRTT 280
SS TT
Sbjct: 434 TTPSTMKSSPTT 445
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 27.9 bits (59), Expect = 3.5
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +2
Query: 68 TPNGGSSRPRTPTGLLTPSGRQRTPSGSTTPVRSGQQT 181
TP+GG P P G P+G T P GQ T
Sbjct: 201 TPSGGGEGPAGPPGPPGPAGNPGTDGAPGNPGAPGQVT 238
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 27.9 bits (59), Expect = 3.5
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +1
Query: 196 AKEAFGRVRGRNPHDPWSPTRDSLVTNNGETRAVPIVNEKKKLYAE 333
A E++GR RG +P D P RDS + + ++RA+ + Y+E
Sbjct: 309 AYESYGRERGPDPRDVRDP-RDSRMPDPRDSRALSDPYAAESRYSE 353
>AL023844-11|CAA19525.3| 489|Caenorhabditis elegans Hypothetical
protein Y48A6B.10 protein.
Length = 489
Score = 27.5 bits (58), Expect = 4.6
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 62 LTTPNGGSSRPRTPTGLLTPSGRQRTPSGSTTPVRS 169
L+ PN + + TP G L P+ ++ PS S P RS
Sbjct: 264 LSAPNYSTFQCLTPNGRLLPAVPRKYPSQSEPPPRS 299
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 27.1 bits (57), Expect = 6.1
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 196 AKEAFGRVRGRNPHDPWSPTRDSLVTNNGETRAV 297
A E++GR RG +P D P RDS + + ++RA+
Sbjct: 309 AYESYGRERGPDPRDVRDP-RDSRMPDPRDSRAL 341
>U50311-2|AAA92308.2| 486|Caenorhabditis elegans Hypothetical
protein C25E10.4 protein.
Length = 486
Score = 26.6 bits (56), Expect = 8.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 437 KCRHVLYKENFDMESFKATCIAYVDIISHKLEI 339
KC H ++ F + SFKA + Y I+S + I
Sbjct: 80 KCAHAVFALVFSIWSFKARSVKYPMIVSRFIAI 112
>AL132898-11|CAB60945.4| 552|Caenorhabditis elegans Hypothetical
protein Y59A8B.22 protein.
Length = 552
Score = 26.6 bits (56), Expect = 8.1
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = -2
Query: 440 DKCRHVLYKENFDMESFKATCIAYVDIISHKLEIKHSAY 324
D H + N DM S +A C+ D +S + ++K++ +
Sbjct: 85 DNRNHRTEEINIDMNSDEAICVDISDALSEREKVKYTVH 123
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,725,420
Number of Sequences: 27780
Number of extensions: 187698
Number of successful extensions: 752
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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